Widespread occurrence of expressed fungal secretory peroxidases in forest soils.
Identifieur interne : 000015 ( PubMed/Curation ); précédent : 000014; suivant : 000016Widespread occurrence of expressed fungal secretory peroxidases in forest soils.
Auteurs : Harald Kellner [Allemagne] ; Patricia Luis [France] ; Marek J. Pecyna [Allemagne] ; Florian Barbi [France] ; Danuta Kapturska [Allemagne] ; Dirk Krüger [Allemagne] ; Donald R. Zak [États-Unis] ; Roland Marmeisse [France] ; Micheline Vandenbol [Belgique] ; Martin Hofrichter [Allemagne]Source :
- PloS one [ 1932-6203 ] ; 2014.
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : Fungal Proteins, Peroxidases.
- enzymology : Basidiomycota.
- chemical , metabolism : Fungal Proteins, Peroxidases.
- chemical , secretion : Fungal Proteins, Peroxidases.
- Amino Acid Sequence, Forests, Molecular Sequence Data, Phylogeny, Sequence Analysis, DNA, Soil Microbiology.
Abstract
Fungal secretory peroxidases mediate fundamental ecological functions in the conversion and degradation of plant biomass. Many of these enzymes have strong oxidizing activities towards aromatic compounds and are involved in the degradation of plant cell wall (lignin) and humus. They comprise three major groups: class II peroxidases (including lignin peroxidase, manganese peroxidase, versatile peroxidase and generic peroxidase), dye-decolorizing peroxidases, and heme-thiolate peroxidases (e.g. unspecific/aromatic peroxygenase, chloroperoxidase). Here, we have repeatedly observed a widespread expression of all major peroxidase groups in leaf and needle litter across a range of forest ecosystems (e.g. Fagus, Picea, Acer, Quercus, and Populus spp.), which are widespread in Europe and North America. Manganese peroxidases and unspecific peroxygenases were found expressed in all nine investigated forest sites, and dye-decolorizing peroxidases were observed in five of the nine sites, thereby indicating biological significance of these enzymes for fungal physiology and ecosystem processes. Transcripts of selected secretory peroxidase genes were also analyzed in pure cultures of several litter-decomposing species and other fungi. Using this information, we were able to match, in environmental litter samples, two manganese peroxidase sequences to Mycena galopus and Mycena epipterygia and one unspecific peroxygenase transcript to Mycena galopus, suggesting an important role of this litter- and coarse woody debris-dwelling genus in the disintegration and transformation of litter aromatics and organic matter formation.
DOI: 10.1371/journal.pone.0095557
PubMed: 24763280
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Pecyna</name><affiliation wicri:level="1"><nlm:affiliation>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau</wicri:regionArea></affiliation></author><author><name sortKey="Barbi, Florian" sort="Barbi, Florian" uniqKey="Barbi F" first="Florian" last="Barbi">Florian Barbi</name><affiliation wicri:level="1"><nlm:affiliation>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne</wicri:regionArea></affiliation></author><author><name sortKey="Kapturska, Danuta" sort="Kapturska, Danuta" uniqKey="Kapturska D" first="Danuta" last="Kapturska">Danuta Kapturska</name><affiliation wicri:level="1"><nlm:affiliation>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany; Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany; Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale</wicri:regionArea></affiliation></author><author><name sortKey="Kruger, Dirk" sort="Kruger, Dirk" uniqKey="Kruger D" first="Dirk" last="Krüger">Dirk Krüger</name><affiliation wicri:level="1"><nlm:affiliation>Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale</wicri:regionArea></affiliation></author><author><name sortKey="Zak, Donald R" sort="Zak, Donald R" uniqKey="Zak D" first="Donald R" last="Zak">Donald R. Zak</name><affiliation wicri:level="1"><nlm:affiliation>School of Natural Resources and Environment, University of Michigan, Ann Arbor, Michigan, United States of America.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>School of Natural Resources and Environment, University of Michigan, Ann Arbor, Michigan</wicri:regionArea></affiliation></author><author><name sortKey="Marmeisse, Roland" sort="Marmeisse, Roland" uniqKey="Marmeisse R" first="Roland" last="Marmeisse">Roland Marmeisse</name><affiliation wicri:level="1"><nlm:affiliation>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne</wicri:regionArea></affiliation></author><author><name sortKey="Vandenbol, Micheline" sort="Vandenbol, Micheline" uniqKey="Vandenbol M" first="Micheline" last="Vandenbol">Micheline Vandenbol</name><affiliation wicri:level="1"><nlm:affiliation>Unité de Microbiologie et Génomique, Gembloux Agro-Bio Tech, Université de Liège, Gembloux, Belgium.</nlm:affiliation><country xml:lang="fr">Belgique</country><wicri:regionArea>Unité de Microbiologie et Génomique, Gembloux Agro-Bio Tech, Université de Liège, Gembloux</wicri:regionArea></affiliation></author><author><name sortKey="Hofrichter, Martin" sort="Hofrichter, Martin" uniqKey="Hofrichter M" first="Martin" last="Hofrichter">Martin Hofrichter</name><affiliation wicri:level="1"><nlm:affiliation>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau</wicri:regionArea></affiliation></author></analytic><series><title level="j">PloS one</title><idno type="eISSN">1932-6203</idno><imprint><date when="2014" type="published">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Amino Acid Sequence</term><term>Basidiomycota (enzymology)</term><term>Forests</term><term>Fungal Proteins (genetics)</term><term>Fungal Proteins (metabolism)</term><term>Fungal Proteins (secretion)</term><term>Molecular Sequence Data</term><term>Peroxidases (genetics)</term><term>Peroxidases (metabolism)</term><term>Peroxidases (secretion)</term><term>Phylogeny</term><term>Sequence Analysis, DNA</term><term>Soil Microbiology</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Fungal Proteins</term><term>Peroxidases</term></keywords><keywords scheme="MESH" qualifier="enzymology" xml:lang="en"><term>Basidiomycota</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Fungal Proteins</term><term>Peroxidases</term></keywords><keywords scheme="MESH" type="chemical" qualifier="secretion" xml:lang="en"><term>Fungal Proteins</term><term>Peroxidases</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Amino Acid Sequence</term><term>Forests</term><term>Molecular Sequence Data</term><term>Phylogeny</term><term>Sequence Analysis, DNA</term><term>Soil Microbiology</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Fungal secretory peroxidases mediate fundamental ecological functions in the conversion and degradation of plant biomass. Many of these enzymes have strong oxidizing activities towards aromatic compounds and are involved in the degradation of plant cell wall (lignin) and humus. They comprise three major groups: class II peroxidases (including lignin peroxidase, manganese peroxidase, versatile peroxidase and generic peroxidase), dye-decolorizing peroxidases, and heme-thiolate peroxidases (e.g. unspecific/aromatic peroxygenase, chloroperoxidase). Here, we have repeatedly observed a widespread expression of all major peroxidase groups in leaf and needle litter across a range of forest ecosystems (e.g. Fagus, Picea, Acer, Quercus, and Populus spp.), which are widespread in Europe and North America. Manganese peroxidases and unspecific peroxygenases were found expressed in all nine investigated forest sites, and dye-decolorizing peroxidases were observed in five of the nine sites, thereby indicating biological significance of these enzymes for fungal physiology and ecosystem processes. Transcripts of selected secretory peroxidase genes were also analyzed in pure cultures of several litter-decomposing species and other fungi. Using this information, we were able to match, in environmental litter samples, two manganese peroxidase sequences to Mycena galopus and Mycena epipterygia and one unspecific peroxygenase transcript to Mycena galopus, suggesting an important role of this litter- and coarse woody debris-dwelling genus in the disintegration and transformation of litter aromatics and organic matter formation.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">24763280</PMID><DateCreated><Year>2014</Year><Month>04</Month><Day>25</Day></DateCreated><DateCompleted><Year>2015</Year><Month>01</Month><Day>20</Day></DateCompleted><DateRevised><Year>2015</Year><Month>08</Month><Day>06</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Electronic">1932-6203</ISSN><JournalIssue CitedMedium="Internet"><Volume>9</Volume><Issue>4</Issue><PubDate><Year>2014</Year></PubDate></JournalIssue><Title>PloS one</Title><ISOAbbreviation>PLoS ONE</ISOAbbreviation></Journal><ArticleTitle>Widespread occurrence of expressed fungal secretory peroxidases in forest soils.</ArticleTitle><Pagination><MedlinePgn>e95557</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0095557</ELocationID><Abstract><AbstractText>Fungal secretory peroxidases mediate fundamental ecological functions in the conversion and degradation of plant biomass. Many of these enzymes have strong oxidizing activities towards aromatic compounds and are involved in the degradation of plant cell wall (lignin) and humus. They comprise three major groups: class II peroxidases (including lignin peroxidase, manganese peroxidase, versatile peroxidase and generic peroxidase), dye-decolorizing peroxidases, and heme-thiolate peroxidases (e.g. unspecific/aromatic peroxygenase, chloroperoxidase). Here, we have repeatedly observed a widespread expression of all major peroxidase groups in leaf and needle litter across a range of forest ecosystems (e.g. Fagus, Picea, Acer, Quercus, and Populus spp.), which are widespread in Europe and North America. Manganese peroxidases and unspecific peroxygenases were found expressed in all nine investigated forest sites, and dye-decolorizing peroxidases were observed in five of the nine sites, thereby indicating biological significance of these enzymes for fungal physiology and ecosystem processes. Transcripts of selected secretory peroxidase genes were also analyzed in pure cultures of several litter-decomposing species and other fungi. Using this information, we were able to match, in environmental litter samples, two manganese peroxidase sequences to Mycena galopus and Mycena epipterygia and one unspecific peroxygenase transcript to Mycena galopus, suggesting an important role of this litter- and coarse woody debris-dwelling genus in the disintegration and transformation of litter aromatics and organic matter formation.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Kellner</LastName><ForeName>Harald</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Luis</LastName><ForeName>Patricia</ForeName><Initials>P</Initials><AffiliationInfo><Affiliation>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Pecyna</LastName><ForeName>Marek J</ForeName><Initials>MJ</Initials><AffiliationInfo><Affiliation>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Barbi</LastName><ForeName>Florian</ForeName><Initials>F</Initials><AffiliationInfo><Affiliation>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kapturska</LastName><ForeName>Danuta</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany; Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Krüger</LastName><ForeName>Dirk</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>Department of Soil Ecology, UFZ - Helmholtz Center for Environmental Research, Halle/Saale, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zak</LastName><ForeName>Donald R</ForeName><Initials>DR</Initials><AffiliationInfo><Affiliation>School of Natural Resources and Environment, University of Michigan, Ann Arbor, Michigan, United States of America.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Marmeisse</LastName><ForeName>Roland</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>Ecologie Microbienne, UMR CNRS 5557, USC INRA 1364, Université de Lyon, Université Lyon 1, Villeurbanne, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Vandenbol</LastName><ForeName>Micheline</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Unité de Microbiologie et Génomique, Gembloux Agro-Bio Tech, Université de Liège, Gembloux, Belgium.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hofrichter</LastName><ForeName>Martin</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Bio- and Environmental Sciences, International Institute Zittau, Technische Universität Dresden, Zittau, Germany.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType><PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2014</Year><Month>04</Month><Day>24</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>PLoS One</MedlineTA><NlmUniqueID>101285081</NlmUniqueID><ISSNLinking>1932-6203</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D005656">Fungal Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 1.11.1.-</RegistryNumber><NameOfSubstance UI="D010544">Peroxidases</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 1.11.1.-</RegistryNumber><NameOfSubstance UI="C042858">lignin peroxidase</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 1.11.1.13</RegistryNumber><NameOfSubstance UI="C051129">manganese peroxidase</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><CommentsCorrectionsList><CommentsCorrections RefType="Cites"><RefSource>Appl Microbiol Biotechnol. 2000 Apr;53(4):441-6</RefSource><PMID Version="1">10803901</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Proc Natl Acad Sci U S A. 2012 Oct 23;109(43):17501-6</RefSource><PMID Version="1">23045686</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Appl Environ Microbiol. 2002 Jul;68(7):3442-8</RefSource><PMID Version="1">12089026</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Mycol Res. 2003 Aug;107(Pt 8):996-1008</RefSource><PMID Version="1">14531622</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Appl Environ Microbiol. 2004 Aug;70(8):4575-81</RefSource><PMID Version="1">15294788</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Biol Chem. 1989 Feb 25;264(6):3335-40</RefSource><PMID Version="1">2914954</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Biochem Soc Trans. 1992 May;20(2):345-9</RefSource><PMID Version="1">1397627</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Biochem Biophys Res Commun. 2005 May 6;330(2):371-7</RefSource><PMID Version="1">15796893</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>FEMS Microbiol Rev. 2006 Mar;30(2):215-42</RefSource><PMID Version="1">16472305</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Res Microbiol. 2007 Jun;158(5):447-55</RefSource><PMID Version="1">17537615</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Mol Evol. 2008 Mar;66(3):243-57</RefSource><PMID Version="1">18292958</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2009 Jan;37(Database issue):D261-6</RefSource><PMID Version="1">18948296</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Appl Microbiol Biotechnol. 2009 Oct;84(5):885-97</RefSource><PMID Version="1">19434406</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Oecologia. 2009 Oct;161(4):657-60</RefSource><PMID Version="1">19685081</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Oecologia. 2009 Oct;161(4):661-4</RefSource><PMID Version="1">19685248</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>ISME J. 2009 Dec;3(12):1387-95</RefSource><PMID Version="1">19571893</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Appl Microbiol Biotechnol. 2010 Feb;85(6):1869-79</RefSource><PMID Version="1">19756587</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Basic Microbiol. 2010 Feb;50(1):5-20</RefSource><PMID Version="1">20175122</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Curr Drug Metab. 2010 Feb;11(2):162-70</RefSource><PMID Version="1">20359288</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>PLoS One. 2010;5(6):e10971</RefSource><PMID Version="1">20532045</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Appl Microbiol Biotechnol. 2010 Jul;87(3):871-97</RefSource><PMID Version="1">20495915</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Water Sci Technol. 2010;62(2):340-6</RefSource><PMID Version="1">20651438</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>FEMS Microbiol Ecol. 2011 Feb;75(2):291-303</RefSource><PMID Version="1">21114504</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>FEBS J. 2011 Jul;278(13):2387-94</RefSource><PMID Version="1">21569205</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>PLoS One. 2011;6(6):e20421</RefSource><PMID Version="1">21701691</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Mol Biol Evol. 2011 Oct;28(10):2731-9</RefSource><PMID Version="1">21546353</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Environ Microbiol. 2011 Oct;13(10):2778-93</RefSource><PMID Version="1">21883796</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>FEMS Microbiol Ecol. 2011 Oct;78(1):91-102</RefSource><PMID Version="1">21631549</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Chemosphere. 2012 Aug;88(10):1154-60</RefSource><PMID Version="1">22475148</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Science. 2012 Jun 29;336(6089):1715-9</RefSource><PMID Version="1">22745431</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Appl Microbiol Biotechnol. 2000 Dec;54(6):819-25</RefSource><PMID Version="1">11152075</PMID></CommentsCorrections></CommentsCorrectionsList><MeshHeadingList><MeshHeading><DescriptorName UI="D000595" MajorTopicYN="N">Amino Acid Sequence</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D001487" MajorTopicYN="N">Basidiomycota</DescriptorName><QualifierName UI="Q000201" MajorTopicYN="Y">enzymology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D065928" MajorTopicYN="N">Forests</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005656" MajorTopicYN="N">Fungal Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName><QualifierName UI="Q000557" MajorTopicYN="N">secretion</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010544" MajorTopicYN="N">Peroxidases</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName><QualifierName UI="Q000557" MajorTopicYN="N">secretion</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012988" MajorTopicYN="Y">Soil Microbiology</DescriptorName></MeshHeading></MeshHeadingList><OtherID Source="NLM">PMC3999038</OtherID></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2013</Year><Month>12</Month><Day>23</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2014</Year><Month>03</Month><Day>28</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2014</Year><Month>4</Month><Day>26</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2014</Year><Month>4</Month><Day>26</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2015</Year><Month>1</Month><Day>21</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">24763280</ArticleId><ArticleId IdType="doi">10.1371/journal.pone.0095557</ArticleId><ArticleId IdType="pii">PONE-D-13-51780</ArticleId><ArticleId IdType="pmc">PMC3999038</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
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