Biodiversity in the Cladosporium herbarum complex (Davidiellaceae, Capnodiales), with standardisation of methods for Cladosporium taxonomy and diagnostics
Identifieur interne : 000048 ( Ncbi/Checkpoint ); précédent : 000047; suivant : 000049Biodiversity in the Cladosporium herbarum complex (Davidiellaceae, Capnodiales), with standardisation of methods for Cladosporium taxonomy and diagnostics
Auteurs : K. Schubert ; J. Z. Groenewald ; U. Braun ; J. Dijksterhuis ; M. Starink ; C. F. Hill ; P. Zalar ; G. S. De Hoog ; P. W. CrousSource :
- Studies in Mycology [ 0166-0616 ] ; 2007.
Abstract
The
Url:
DOI: 10.3114/sim.2007.58.05
PubMed: 18490998
PubMed Central: 2104742
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: 000104
- to stream Pmc, to step Curation: 000104
- to stream Pmc, to step Checkpoint: 000259
- to stream Ncbi, to step Merge: 00048
- to stream Ncbi, to step Curation: 000048
Links to Exploration step
PMC:2104742Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Biodiversity in the <italic>Cladosporium herbarum</italic>
complex
(<italic>Davidiellaceae</italic>
, <italic>Capnodiales</italic>
), with standardisation of
methods for <italic>Cladosporium</italic>
taxonomy and diagnostics</title>
<author><name sortKey="Schubert, K" sort="Schubert, K" uniqKey="Schubert K" first="K." last="Schubert">K. Schubert</name>
<affiliation><nlm:aff id="aff1"><italic>Botanische Staatssammlung München, Menzinger Strasse 67, D-80638 München, Germany</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Groenewald, J Z" sort="Groenewald, J Z" uniqKey="Groenewald J" first="J. Z." last="Groenewald">J. Z. Groenewald</name>
<affiliation><nlm:aff id="aff2"><italic>CBS Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Braun, U" sort="Braun, U" uniqKey="Braun U" first="U." last="Braun">U. Braun</name>
<affiliation><nlm:aff id="aff3"><italic>Martin-Luther-Universität, Institut für Biologie, Geobotanik und Botanischer Garten, Herbarium, Neuwerk 21, D-06099 Halle (Saale), Germany</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Dijksterhuis, J" sort="Dijksterhuis, J" uniqKey="Dijksterhuis J" first="J." last="Dijksterhuis">J. Dijksterhuis</name>
<affiliation><nlm:aff id="aff2"><italic>CBS Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Starink, M" sort="Starink, M" uniqKey="Starink M" first="M." last="Starink">M. Starink</name>
<affiliation><nlm:aff id="aff2"><italic>CBS Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Hill, C F" sort="Hill, C F" uniqKey="Hill C" first="C. F." last="Hill">C. F. Hill</name>
<affiliation><nlm:aff id="aff4"><italic>Plant & Environment Laboratory Biosecurity NZ, Ministry of Agriculture & Forestry, P.O. Box 2095, Auckland 1140, New Zealand</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Zalar, P" sort="Zalar, P" uniqKey="Zalar P" first="P." last="Zalar">P. Zalar</name>
<affiliation><nlm:aff id="aff5"><italic>Biotechnical Faculty, Department of Biology, Večna pot 111, SI-1000 Ljubljana, Slovenia</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="De Hoog, G S" sort="De Hoog, G S" uniqKey="De Hoog G" first="G. S." last="De Hoog">G. S. De Hoog</name>
<affiliation><nlm:aff id="aff2"><italic>CBS Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name>
<affiliation><nlm:aff id="aff2"><italic>CBS Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PMC</idno>
<idno type="pmid">18490998</idno>
<idno type="pmc">2104742</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2104742</idno>
<idno type="RBID">PMC:2104742</idno>
<idno type="doi">10.3114/sim.2007.58.05</idno>
<date when="2007">2007</date>
<idno type="wicri:Area/Pmc/Corpus">000104</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000104</idno>
<idno type="wicri:Area/Pmc/Curation">000104</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000104</idno>
<idno type="wicri:Area/Pmc/Checkpoint">000259</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000259</idno>
<idno type="wicri:Area/Ncbi/Merge">00048</idno>
<idno type="wicri:Area/Ncbi/Curation">000048</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000048</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Biodiversity in the <italic>Cladosporium herbarum</italic>
complex
(<italic>Davidiellaceae</italic>
, <italic>Capnodiales</italic>
), with standardisation of
methods for <italic>Cladosporium</italic>
taxonomy and diagnostics</title>
<author><name sortKey="Schubert, K" sort="Schubert, K" uniqKey="Schubert K" first="K." last="Schubert">K. Schubert</name>
<affiliation><nlm:aff id="aff1"><italic>Botanische Staatssammlung München, Menzinger Strasse 67, D-80638 München, Germany</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Groenewald, J Z" sort="Groenewald, J Z" uniqKey="Groenewald J" first="J. Z." last="Groenewald">J. Z. Groenewald</name>
<affiliation><nlm:aff id="aff2"><italic>CBS Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Braun, U" sort="Braun, U" uniqKey="Braun U" first="U." last="Braun">U. Braun</name>
<affiliation><nlm:aff id="aff3"><italic>Martin-Luther-Universität, Institut für Biologie, Geobotanik und Botanischer Garten, Herbarium, Neuwerk 21, D-06099 Halle (Saale), Germany</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Dijksterhuis, J" sort="Dijksterhuis, J" uniqKey="Dijksterhuis J" first="J." last="Dijksterhuis">J. Dijksterhuis</name>
<affiliation><nlm:aff id="aff2"><italic>CBS Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Starink, M" sort="Starink, M" uniqKey="Starink M" first="M." last="Starink">M. Starink</name>
<affiliation><nlm:aff id="aff2"><italic>CBS Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Hill, C F" sort="Hill, C F" uniqKey="Hill C" first="C. F." last="Hill">C. F. Hill</name>
<affiliation><nlm:aff id="aff4"><italic>Plant & Environment Laboratory Biosecurity NZ, Ministry of Agriculture & Forestry, P.O. Box 2095, Auckland 1140, New Zealand</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Zalar, P" sort="Zalar, P" uniqKey="Zalar P" first="P." last="Zalar">P. Zalar</name>
<affiliation><nlm:aff id="aff5"><italic>Biotechnical Faculty, Department of Biology, Večna pot 111, SI-1000 Ljubljana, Slovenia</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="De Hoog, G S" sort="De Hoog, G S" uniqKey="De Hoog G" first="G. S." last="De Hoog">G. S. De Hoog</name>
<affiliation><nlm:aff id="aff2"><italic>CBS Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name>
<affiliation><nlm:aff id="aff2"><italic>CBS Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands</italic>
</nlm:aff>
</affiliation>
</author>
</analytic>
<series><title level="j">Studies in Mycology</title>
<idno type="ISSN">0166-0616</idno>
<idno type="eISSN">1872-9797</idno>
<imprint><date when="2007">2007</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en"><p>The <italic>Cladosporium herbarum</italic>
complex comprises five species for which
<italic>Davidiella</italic>
teleomorphs are known. <italic>Cladosporium herbarum s.
str.</italic>
(<italic>D. tassiana</italic>
), <italic>C. macrocarpum</italic>
(<italic>D.
macrocarpa</italic>
) and <italic>C. bruhnei</italic>
(<italic>D. allicina</italic>
) are
distinguishable by having conidia of different width, and by teleomorph
characters. <italic>Davidiella variabile</italic>
is introduced as teleomorph of
<italic>C. variabile</italic>
, a homothallic species occurring on <italic>Spinacia</italic>
,
and <italic>D. macrospora</italic>
is known to be the teleomorph of <italic>C. iridis</italic>
on <italic>Iris</italic>
spp. The <italic>C. herbarum</italic>
complex combines low molecular
distance with a high degree of clonal or inbreeding diversity. Entities differ
from each other by multilocus sequence data and by phenetic differences, and
thus can be interpreted to represent individual taxa. Isolates of the <italic>C.
herbarum</italic>
complex that were formerly associated with opportunistic human
infections, cluster with <italic>C. bruhnei</italic>
. Several species are newly
described from hypersaline water, namely <italic>C. ramotenellum</italic>
, <italic>C.
tenellum</italic>
, <italic>C. subinflatum</italic>
, and <italic>C. herbaroides</italic>
.
<italic>Cladosporium pseudiridis</italic>
collected from <italic>Iris</italic>
sp. in New
Zealand, is also a member of this species complex and shown to be distinct
from <italic>C. iridis</italic>
that occurs on this host elsewhere in the world. A
further new species from New Zealand is <italic>C. sinuosum</italic>
on <italic>Fuchsia
excorticata</italic>
. <italic>Cladosporium antarcticum</italic>
is newly described from a
lichen, <italic>Caloplaca regalis</italic>
, collected in Antarctica, and <italic>C.
subtilissimum</italic>
from grape berries in the U.S.A., while the new combination
<italic>C. ossifragi</italic>
, the oldest valid name of the <italic>Cladosporium</italic>
known from <italic>Narthecium</italic>
in Europe, is proposed. Standard protocols and
media are herewith proposed to facilitate future morphological examination of
<italic>Cladosporium</italic>
spp. in culture, and neotypes or epitypes are proposed
for all species treated.</p>
</div>
</front>
<back><div1 type="bibliography"><listBibl><biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
</listBibl>
</div1>
</back>
</TEI>
<affiliations><list></list>
<tree><noCountry><name sortKey="Braun, U" sort="Braun, U" uniqKey="Braun U" first="U." last="Braun">U. Braun</name>
<name sortKey="Crous, P W" sort="Crous, P W" uniqKey="Crous P" first="P. W." last="Crous">P. W. Crous</name>
<name sortKey="De Hoog, G S" sort="De Hoog, G S" uniqKey="De Hoog G" first="G. S." last="De Hoog">G. S. De Hoog</name>
<name sortKey="Dijksterhuis, J" sort="Dijksterhuis, J" uniqKey="Dijksterhuis J" first="J." last="Dijksterhuis">J. Dijksterhuis</name>
<name sortKey="Groenewald, J Z" sort="Groenewald, J Z" uniqKey="Groenewald J" first="J. Z." last="Groenewald">J. Z. Groenewald</name>
<name sortKey="Hill, C F" sort="Hill, C F" uniqKey="Hill C" first="C. F." last="Hill">C. F. Hill</name>
<name sortKey="Schubert, K" sort="Schubert, K" uniqKey="Schubert K" first="K." last="Schubert">K. Schubert</name>
<name sortKey="Starink, M" sort="Starink, M" uniqKey="Starink M" first="M." last="Starink">M. Starink</name>
<name sortKey="Zalar, P" sort="Zalar, P" uniqKey="Zalar P" first="P." last="Zalar">P. Zalar</name>
</noCountry>
</tree>
</affiliations>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/CheneBelgiqueV1/Data/Ncbi/Checkpoint
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000048 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Ncbi/Checkpoint/biblio.hfd -nk 000048 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Wicri/Bois |area= CheneBelgiqueV1 |flux= Ncbi |étape= Checkpoint |type= RBID |clé= PMC:2104742 |texte= Biodiversity in the Cladosporium herbarum complex (Davidiellaceae, Capnodiales), with standardisation of methods for Cladosporium taxonomy and diagnostics }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Ncbi/Checkpoint/RBID.i -Sk "pubmed:18490998" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Ncbi/Checkpoint/biblio.hfd \ | NlmPubMed2Wicri -a CheneBelgiqueV1
![]() | This area was generated with Dilib version V0.6.27. | ![]() |