Characterization of a novel PXR isoform with potential dominant-negative properties.
Identifieur interne : 003477 ( PubMed/Corpus ); précédent : 003476; suivant : 003478Characterization of a novel PXR isoform with potential dominant-negative properties.
Auteurs : Cyril Breuker ; Chris Planque ; Fatemeh Rajabi ; Jean-Charles Nault ; Gabrielle Couchy ; Jessica Zucman-Rossi ; Alexandre Evrard ; Jovana Kantar ; Eric Chevet ; Paulette Bioulac-Sage ; Jeanne Ramos ; Eric Assenat ; Dominique Joubert ; Julie Pannequin ; Frédéric Hollande ; Jean Marc PascussiSource :
- Journal of hepatology [ 1600-0641 ] ; 2014.
English descriptors
- KwdEn :
- Adenoma, Liver Cell (metabolism), Adenoma, Liver Cell (pathology), Adenoma, Liver Cell (surgery), Carcinoma, Hepatocellular (metabolism), Carcinoma, Hepatocellular (pathology), Carcinoma, Hepatocellular (surgery), Cell Line, Tumor, Cells, Cultured, DNA Methylation, Hepatectomy, Humans, In Vitro Techniques, Liver (metabolism), Liver (pathology), Liver Neoplasms (metabolism), Liver Neoplasms (pathology), Liver Neoplasms (surgery), Protein Isoforms (genetics), Protein Isoforms (metabolism), RNA, Messenger (genetics), RNA, Messenger (metabolism), Receptors, Steroid (genetics), Receptors, Steroid (metabolism), Treatment Outcome.
- MESH :
- chemical , genetics : Protein Isoforms, RNA, Messenger, Receptors, Steroid.
- metabolism : Adenoma, Liver Cell, Carcinoma, Hepatocellular, Liver, Liver Neoplasms, Protein Isoforms, RNA, Messenger, Receptors, Steroid.
- pathology : Adenoma, Liver Cell, Carcinoma, Hepatocellular, Liver, Liver Neoplasms.
- surgery : Adenoma, Liver Cell, Carcinoma, Hepatocellular, Liver Neoplasms.
- Cell Line, Tumor, Cells, Cultured, DNA Methylation, Hepatectomy, Humans, In Vitro Techniques, Treatment Outcome.
Abstract
The nuclear Pregnane X Receptor (PXR, NR1I2) plays a pivotal role in xenobiotic metabolism. Here, we sought to characterize a new PXR isoform (hereafter called small PXR or sPXR) stemming from alternative transcription starting sites downstream of a CpG Island located near exon 3 of the human PXR gene.
DOI: 10.1016/j.jhep.2014.04.030
PubMed: 24798619
Links to Exploration step
pubmed:24798619Le document en format XML
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<author><name sortKey="Nault, Jean Charles" sort="Nault, Jean Charles" uniqKey="Nault J" first="Jean-Charles" last="Nault">Jean-Charles Nault</name>
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<author><name sortKey="Pascussi, Jean Marc" sort="Pascussi, Jean Marc" uniqKey="Pascussi J" first="Jean Marc" last="Pascussi">Jean Marc Pascussi</name>
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<author><name sortKey="Bioulac Sage, Paulette" sort="Bioulac Sage, Paulette" uniqKey="Bioulac Sage P" first="Paulette" last="Bioulac-Sage">Paulette Bioulac-Sage</name>
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<author><name sortKey="Pascussi, Jean Marc" sort="Pascussi, Jean Marc" uniqKey="Pascussi J" first="Jean Marc" last="Pascussi">Jean Marc Pascussi</name>
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<term>Adenoma, Liver Cell (pathology)</term>
<term>Adenoma, Liver Cell (surgery)</term>
<term>Carcinoma, Hepatocellular (metabolism)</term>
<term>Carcinoma, Hepatocellular (pathology)</term>
<term>Carcinoma, Hepatocellular (surgery)</term>
<term>Cell Line, Tumor</term>
<term>Cells, Cultured</term>
<term>DNA Methylation</term>
<term>Hepatectomy</term>
<term>Humans</term>
<term>In Vitro Techniques</term>
<term>Liver (metabolism)</term>
<term>Liver (pathology)</term>
<term>Liver Neoplasms (metabolism)</term>
<term>Liver Neoplasms (pathology)</term>
<term>Liver Neoplasms (surgery)</term>
<term>Protein Isoforms (genetics)</term>
<term>Protein Isoforms (metabolism)</term>
<term>RNA, Messenger (genetics)</term>
<term>RNA, Messenger (metabolism)</term>
<term>Receptors, Steroid (genetics)</term>
<term>Receptors, Steroid (metabolism)</term>
<term>Treatment Outcome</term>
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<term>RNA, Messenger</term>
<term>Receptors, Steroid</term>
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<keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Adenoma, Liver Cell</term>
<term>Carcinoma, Hepatocellular</term>
<term>Liver</term>
<term>Liver Neoplasms</term>
<term>Protein Isoforms</term>
<term>RNA, Messenger</term>
<term>Receptors, Steroid</term>
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<term>Carcinoma, Hepatocellular</term>
<term>Liver</term>
<term>Liver Neoplasms</term>
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<term>Carcinoma, Hepatocellular</term>
<term>Liver Neoplasms</term>
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<term>Cells, Cultured</term>
<term>DNA Methylation</term>
<term>Hepatectomy</term>
<term>Humans</term>
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<front><div type="abstract" xml:lang="en">The nuclear Pregnane X Receptor (PXR, NR1I2) plays a pivotal role in xenobiotic metabolism. Here, we sought to characterize a new PXR isoform (hereafter called small PXR or sPXR) stemming from alternative transcription starting sites downstream of a CpG Island located near exon 3 of the human PXR gene.</div>
</front>
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<DateCreated><Year>2014</Year>
<Month>08</Month>
<Day>19</Day>
</DateCreated>
<DateCompleted><Year>2015</Year>
<Month>07</Month>
<Day>20</Day>
</DateCompleted>
<DateRevised><Year>2014</Year>
<Month>08</Month>
<Day>19</Day>
</DateRevised>
<Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1600-0641</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>61</Volume>
<Issue>3</Issue>
<PubDate><Year>2014</Year>
<Month>Sep</Month>
</PubDate>
</JournalIssue>
<Title>Journal of hepatology</Title>
<ISOAbbreviation>J. Hepatol.</ISOAbbreviation>
</Journal>
<ArticleTitle>Characterization of a novel PXR isoform with potential dominant-negative properties.</ArticleTitle>
<Pagination><MedlinePgn>609-16</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1016/j.jhep.2014.04.030</ELocationID>
<ELocationID EIdType="pii" ValidYN="Y">S0168-8278(14)00293-1</ELocationID>
<Abstract><AbstractText Label="BACKGROUND & AIMS" NlmCategory="OBJECTIVE">The nuclear Pregnane X Receptor (PXR, NR1I2) plays a pivotal role in xenobiotic metabolism. Here, we sought to characterize a new PXR isoform (hereafter called small PXR or sPXR) stemming from alternative transcription starting sites downstream of a CpG Island located near exon 3 of the human PXR gene.</AbstractText>
<AbstractText Label="METHODS" NlmCategory="METHODS">Quantitative RT-PCR, western blot, methylation-specific PCR, luciferase reporter assays, electro-mobility shift assays, and stable sPXR overexpression were used to examine sPXR expression and function in hepatocellular cell lines, healthy human liver (n=99), hepatocellular adenomas (HCA, n=91) and hepatocellular carcinoma samples (HCC, n=213).</AbstractText>
<AbstractText Label="RESULTS" NlmCategory="RESULTS">Liver sPXR mRNA expression varied importantly among individuals and encodes a 37kDa nuclear protein consisting of the ligand-binding domain of PXR that behaves as a dominant-negative of PXR transactivation properties. In vitro methylation of the sPXR upstream promoter abolished its activity, while the demethylation agent 5-aza-2-deoxycytidine increased sPXR mRNA expression in several cell lines. Finally, we observed that sPXR mRNA expression displayed significant differences related to HCA or HCC biology.</AbstractText>
<AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">This novel PXR isoform, displaying a dominant-negative activity and regulated by DNA methylation, is associated with outcomes of patients with HCC treated by resection, suggesting that it represents a key modulator of PXR.</AbstractText>
<CopyrightInformation>Copyright © 2014 European Association for the Study of the Liver. Published by Elsevier B.V. All rights reserved.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Breuker</LastName>
<ForeName>Cyril</ForeName>
<Initials>C</Initials>
<AffiliationInfo><Affiliation>Centre National de la Recherche Scientifique, UMR5203, Institut de Génomique Fonctionnelle, Montpellier, France; Institut National de la Santé et de la Recherche Médicale, U661, Montpellier, France; Université Montpellier 1 et 2, UMR5203, Montpellier, France; Service de Pharmacie, Centre Hospitalier Universitaire Lapeyronie, Montpellier, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Planque</LastName>
<ForeName>Chris</ForeName>
<Initials>C</Initials>
<AffiliationInfo><Affiliation>Centre National de la Recherche Scientifique, UMR5203, Institut de Génomique Fonctionnelle, Montpellier, France; Institut National de la Santé et de la Recherche Médicale, U661, Montpellier, France; Université Montpellier 1 et 2, UMR5203, Montpellier, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Rajabi</LastName>
<ForeName>Fatemeh</ForeName>
<Initials>F</Initials>
<AffiliationInfo><Affiliation>Centre National de la Recherche Scientifique, UMR5203, Institut de Génomique Fonctionnelle, Montpellier, France; Institut National de la Santé et de la Recherche Médicale, U661, Montpellier, France; Université Montpellier 1 et 2, UMR5203, Montpellier, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Nault</LastName>
<ForeName>Jean-Charles</ForeName>
<Initials>JC</Initials>
<AffiliationInfo><Affiliation>Institut National de la Santé et de la Recherche Médicale, U674, Paris, France; Université Paris Descartes, Paris, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Couchy</LastName>
<ForeName>Gabrielle</ForeName>
<Initials>G</Initials>
<AffiliationInfo><Affiliation>Institut National de la Santé et de la Recherche Médicale, U674, Paris, France; Université Paris Descartes, Paris, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Zucman-Rossi</LastName>
<ForeName>Jessica</ForeName>
<Initials>J</Initials>
<AffiliationInfo><Affiliation>Institut National de la Santé et de la Recherche Médicale, U674, Paris, France; Université Paris Descartes, Paris, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Evrard</LastName>
<ForeName>Alexandre</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>Centre National de la Recherche Scientifique, UMR5203, Institut de Génomique Fonctionnelle, Montpellier, France; Institut National de la Santé et de la Recherche Médicale, U661, Montpellier, France; Université Montpellier 1 et 2, UMR5203, Montpellier, France; Laboratoire de Biochimie, Centre Hospitalier Universitaire, Nîmes, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Kantar</LastName>
<ForeName>Jovana</ForeName>
<Initials>J</Initials>
<AffiliationInfo><Affiliation>Laboratoire de Biochimie, Centre Hospitalier Universitaire, Nîmes, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Chevet</LastName>
<ForeName>Eric</ForeName>
<Initials>E</Initials>
<AffiliationInfo><Affiliation>Institut National de la Santé et de la Recherche Médicale, U1053, Bordeaux, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Bioulac-Sage</LastName>
<ForeName>Paulette</ForeName>
<Initials>P</Initials>
<AffiliationInfo><Affiliation>Service d'anatomie pathologique, Centre Hospitalier Universitaire Gui de Chauliac, Montpellier, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Ramos</LastName>
<ForeName>Jeanne</ForeName>
<Initials>J</Initials>
<AffiliationInfo><Affiliation>Service d'anatomie pathologique, Centre Hospitalier Universitaire Gui de Chauliac, Montpellier, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Assenat</LastName>
<ForeName>Eric</ForeName>
<Initials>E</Initials>
<AffiliationInfo><Affiliation>Service d'anatomie pathologique, Centre Hospitalier Universitaire Gui de Chauliac, Montpellier, France; Centre Val d'Aurelle, Montpellier, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Joubert</LastName>
<ForeName>Dominique</ForeName>
<Initials>D</Initials>
<AffiliationInfo><Affiliation>Centre National de la Recherche Scientifique, UMR5203, Institut de Génomique Fonctionnelle, Montpellier, France; Institut National de la Santé et de la Recherche Médicale, U661, Montpellier, France; Université Montpellier 1 et 2, UMR5203, Montpellier, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Pannequin</LastName>
<ForeName>Julie</ForeName>
<Initials>J</Initials>
<AffiliationInfo><Affiliation>Centre National de la Recherche Scientifique, UMR5203, Institut de Génomique Fonctionnelle, Montpellier, France; Institut National de la Santé et de la Recherche Médicale, U661, Montpellier, France; Université Montpellier 1 et 2, UMR5203, Montpellier, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Hollande</LastName>
<ForeName>Frédéric</ForeName>
<Initials>F</Initials>
<AffiliationInfo><Affiliation>Centre National de la Recherche Scientifique, UMR5203, Institut de Génomique Fonctionnelle, Montpellier, France; Institut National de la Santé et de la Recherche Médicale, U661, Montpellier, France; Université Montpellier 1 et 2, UMR5203, Montpellier, France; Department of Pathology, University of Melbourne, Parkville, VIC 3010, Australia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Pascussi</LastName>
<ForeName>Jean Marc</ForeName>
<Initials>JM</Initials>
<AffiliationInfo><Affiliation>Centre National de la Recherche Scientifique, UMR5203, Institut de Génomique Fonctionnelle, Montpellier, France; Institut National de la Santé et de la Recherche Médicale, U661, Montpellier, France; Université Montpellier 1 et 2, UMR5203, Montpellier, France. Electronic address: jean-marc.pascussi@inserm.fr.</Affiliation>
</AffiliationInfo>
</Author>
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<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D003160">Comparative Study</PublicationType>
<PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
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<ArticleDate DateType="Electronic"><Year>2014</Year>
<Month>05</Month>
<Day>02</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>Netherlands</Country>
<MedlineTA>J Hepatol</MedlineTA>
<NlmUniqueID>8503886</NlmUniqueID>
<ISSNLinking>0168-8278</ISSNLinking>
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<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D020033">Protein Isoforms</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D012333">RNA, Messenger</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D011987">Receptors, Steroid</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="C110809">pregnane X receptor</NameOfSubstance>
</Chemical>
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<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D018248" MajorTopicYN="N">Adenoma, Liver Cell</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName>
<QualifierName UI="Q000473" MajorTopicYN="N">pathology</QualifierName>
<QualifierName UI="Q000601" MajorTopicYN="N">surgery</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D006528" MajorTopicYN="N">Carcinoma, Hepatocellular</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName>
<QualifierName UI="Q000473" MajorTopicYN="N">pathology</QualifierName>
<QualifierName UI="Q000601" MajorTopicYN="N">surgery</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D045744" MajorTopicYN="N">Cell Line, Tumor</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D002478" MajorTopicYN="N">Cells, Cultured</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D019175" MajorTopicYN="N">DNA Methylation</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D006498" MajorTopicYN="N">Hepatectomy</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D006801" MajorTopicYN="N">Humans</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D066298" MajorTopicYN="N">In Vitro Techniques</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D008099" MajorTopicYN="N">Liver</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName>
<QualifierName UI="Q000473" MajorTopicYN="N">pathology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D008113" MajorTopicYN="N">Liver Neoplasms</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName>
<QualifierName UI="Q000473" MajorTopicYN="N">pathology</QualifierName>
<QualifierName UI="Q000601" MajorTopicYN="N">surgery</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D020033" MajorTopicYN="N">Protein Isoforms</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012333" MajorTopicYN="N">RNA, Messenger</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D011987" MajorTopicYN="N">Receptors, Steroid</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016896" MajorTopicYN="N">Treatment Outcome</DescriptorName>
</MeshHeading>
</MeshHeadingList>
<KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Drug metabolism</Keyword>
<Keyword MajorTopicYN="N">Epigenetic regulation</Keyword>
<Keyword MajorTopicYN="N">Hepatocyte</Keyword>
<Keyword MajorTopicYN="N">Nuclear receptor</Keyword>
</KeywordList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="received"><Year>2013</Year>
<Month>05</Month>
<Day>14</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="revised"><Year>2014</Year>
<Month>04</Month>
<Day>08</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted"><Year>2014</Year>
<Month>04</Month>
<Day>24</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez"><Year>2014</Year>
<Month>5</Month>
<Day>7</Day>
<Hour>6</Hour>
<Minute>0</Minute>
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<PubMedPubDate PubStatus="pubmed"><Year>2014</Year>
<Month>5</Month>
<Day>7</Day>
<Hour>6</Hour>
<Minute>0</Minute>
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<PubMedPubDate PubStatus="medline"><Year>2015</Year>
<Month>7</Month>
<Day>21</Day>
<Hour>6</Hour>
<Minute>0</Minute>
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<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList><ArticleId IdType="pubmed">24798619</ArticleId>
<ArticleId IdType="pii">S0168-8278(14)00293-1</ArticleId>
<ArticleId IdType="doi">10.1016/j.jhep.2014.04.030</ArticleId>
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