Identifying and sharing data for secondary data analysis of physical activity, sedentary behaviour and their determinants across the life course in Europe: general principles and an example from DEDIPAC
Identifieur interne : 000256 ( Pmc/Checkpoint ); précédent : 000255; suivant : 000257Identifying and sharing data for secondary data analysis of physical activity, sedentary behaviour and their determinants across the life course in Europe: general principles and an example from DEDIPAC
Auteurs : Jeroen Lakerveld [Pays-Bas] ; Anne Loyen [Pays-Bas] ; Fiona Chun Man Ling [Irlande (pays), Australie, Royaume-Uni] ; Marieke De Craemer [Belgique] ; Hidde P. Van Der Ploeg [Pays-Bas] ; Donal J. O Orman [Irlande (pays)] ; Angela Carlin [Irlande (pays)] ; Laura Caprinica [Italie] ; Joeri Kalter [Pays-Bas] ; Jean-Michel Oppert [France] ; Sebastian Chastin [Royaume-Uni] ; Greet Cardon [Belgique] ; Johannes Brug [Pays-Bas] ; Ciaran Macdonncha [Irlande (pays)]Source :
- BMJ Open [ 2044-6055 ] ; 2017.
Abstract
The utilisation of available cross-European data for secondary data analyses on physical activity, sedentary behaviours and their underlying determinants may benefit from the wide variation that exists across Europe in terms of these behaviours and their determinants. Such reuse of existing data for further research requires Findable; Accessible; Interoperable; Reusable (FAIR) data management and stewardship. We here describe the inventory and development of a comprehensive European dataset compendium and the process towards cross-European secondary data analyses of pooled data on physical activity, sedentary behaviour and their correlates across the life course.
A five-step methodology was followed by the European Determinants of Diet and Physical Activity (DEDIPAC) Knowledge Hub, covering the (1) identification of relevant datasets across Europe, (2) development of a compendium including details on the design, study population, measures and level of accessibility of data from each study, (3) definition of key topics and approaches for secondary analyses, (4) process of gaining access to datasets and (5) pooling and harmonisation of the data and the development of a data harmonisation platform.
A total of 114 unique datasets were found for inclusion within the DEDIPAC compendium. Of these datasets, 14 were eventually obtained and reused to address 10 exemplar research questions. The DEDIPAC data harmonisation platform proved to be useful for pooling, but in general, harmonisation was often restricted to just a few core (crude) outcome variables and some individual-level sociodemographic correlates of these behaviours.
Obtaining, pooling and harmonising data for secondary data analyses proved to be difficult and sometimes even impossible. Compliance to FAIR data management and stewardship principles currently appears to be limited for research in the field of physical activity and sedentary behaviour. We discuss some of the reasons why this might be the case and present recommendations based on our experience.
Url:
DOI: 10.1136/bmjopen-2017-017489
PubMed: 29061620
PubMed Central: 5665252
Affiliations:
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PMC:5665252Le document en format XML
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<author><name sortKey="Van Der Ploeg, Hidde P" sort="Van Der Ploeg, Hidde P" uniqKey="Van Der Ploeg H" first="Hidde P" last="Van Der Ploeg">Hidde P. Van Der Ploeg</name>
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<author><name sortKey="Kalter, Joeri" sort="Kalter, Joeri" uniqKey="Kalter J" first="Joeri" last="Kalter">Joeri Kalter</name>
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,<institution>Institute of Cardiometabolism and Nutrition (ICAN), University Pierre et Marie Curie-Paris6</institution>
,<addr-line content-type="city">Paris</addr-line>
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<country xml:lang="fr">France</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
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<author><name sortKey="Chastin, Sebastian" sort="Chastin, Sebastian" uniqKey="Chastin S" first="Sebastian" last="Chastin">Sebastian Chastin</name>
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,<country>UK</country>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
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<author><name sortKey="Cardon, Greet" sort="Cardon, Greet" uniqKey="Cardon G" first="Greet" last="Cardon">Greet Cardon</name>
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,<institution>Ghent University</institution>
,<addr-line content-type="city">Ghent</addr-line>
,<country>Belgium</country>
</nlm:aff>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
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<author><name sortKey="Brug, Johannes" sort="Brug, Johannes" uniqKey="Brug J" first="Johannes" last="Brug">Johannes Brug</name>
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,<institution>AmsterdamPublic Health research institute, VU University Medical Center</institution>
,<addr-line content-type="city">Amsterdam</addr-line>
,<country>Netherlands</country>
</nlm:aff>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
<affiliation wicri:level="1"><nlm:aff id="aff11"><institution>Amsterdam School for Communication Research, University of Amsterdam</institution>
,<addr-line content-type="city">Amsterdam</addr-line>
,<country>Netherlands</country>
</nlm:aff>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
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<author><name sortKey="Macdonncha, Ciaran" sort="Macdonncha, Ciaran" uniqKey="Macdonncha C" first="Ciaran" last="Macdonncha">Ciaran Macdonncha</name>
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,<institution>Centre for Physical Activity and Health Research, University of Limerick</institution>
,<addr-line content-type="city">Limerick</addr-line>
,<country>Ireland</country>
</nlm:aff>
<country xml:lang="fr">Irlande (pays)</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
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<front><div type="abstract" xml:lang="en"><sec><title>Background</title>
<p>The utilisation of available cross-European data for secondary data analyses on physical activity, sedentary behaviours and their underlying determinants may benefit from the wide variation that exists across Europe in terms of these behaviours and their determinants. Such reuse of existing data for further research requires Findable; Accessible; Interoperable; Reusable (FAIR) data management and stewardship. We here describe the inventory and development of a comprehensive European dataset compendium and the process towards cross-European secondary data analyses of pooled data on physical activity, sedentary behaviour and their correlates across the life course.</p>
</sec>
<sec><title>Methods</title>
<p>A five-step methodology was followed by the European Determinants of Diet and Physical Activity (DEDIPAC) Knowledge Hub, covering the (1) identification of relevant datasets across Europe, (2) development of a compendium including details on the design, study population, measures and level of accessibility of data from each study, (3) definition of key topics and approaches for secondary analyses, (4) process of gaining access to datasets and (5) pooling and harmonisation of the data and the development of a data harmonisation platform.</p>
</sec>
<sec><title>Results</title>
<p>A total of 114 unique datasets were found for inclusion within the DEDIPAC compendium. Of these datasets, 14 were eventually obtained and reused to address 10 exemplar research questions. The DEDIPAC data harmonisation platform proved to be useful for pooling, but in general, harmonisation was often restricted to just a few core (crude) outcome variables and some individual-level sociodemographic correlates of these behaviours.</p>
</sec>
<sec><title>Conclusions</title>
<p>Obtaining, pooling and harmonising data for secondary data analyses proved to be difficult and sometimes even impossible. Compliance to FAIR data management and stewardship principles currently appears to be limited for research in the field of physical activity and sedentary behaviour. We discuss some of the reasons why this might be the case and present recommendations based on our experience.</p>
</sec>
</div>
</front>
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<front><journal-meta><journal-id journal-id-type="nlm-ta">BMJ Open</journal-id>
<journal-id journal-id-type="iso-abbrev">BMJ Open</journal-id>
<journal-id journal-id-type="hwp">bmjopen</journal-id>
<journal-id journal-id-type="publisher-id">bmjopen</journal-id>
<journal-title-group><journal-title>BMJ Open</journal-title>
</journal-title-group>
<issn pub-type="epub">2044-6055</issn>
<publisher><publisher-name>BMJ Publishing Group</publisher-name>
<publisher-loc>BMA House, Tavistock Square, London, WC1H 9JR</publisher-loc>
</publisher>
</journal-meta>
<article-meta><article-id pub-id-type="pmid">29061620</article-id>
<article-id pub-id-type="pmc">5665252</article-id>
<article-id pub-id-type="publisher-id">bmjopen-2017-017489</article-id>
<article-id pub-id-type="doi">10.1136/bmjopen-2017-017489</article-id>
<article-categories><subj-group subj-group-type="heading"><subject>Epidemiology</subject>
<subj-group><subject>Research</subject>
</subj-group>
</subj-group>
<subj-group subj-group-type="hwp-journal-coll"><subject>1506</subject>
<subject>1692</subject>
<subject>655</subject>
</subj-group>
</article-categories>
<title-group><article-title>Identifying and sharing data for secondary data analysis of physical activity, sedentary behaviour and their determinants across the life course in Europe: general principles and an example from DEDIPAC</article-title>
</title-group>
<contrib-group><contrib id="author-34248240" contrib-type="author"><name><surname>Lakerveld</surname>
<given-names>Jeroen</given-names>
</name>
<xref ref-type="aff" rid="aff1">1</xref>
</contrib>
<contrib id="author-50553656" contrib-type="author"><name><surname>Loyen</surname>
<given-names>Anne</given-names>
</name>
<xref ref-type="aff" rid="aff1">1</xref>
</contrib>
<contrib id="author-53531702" contrib-type="author"><name><surname>Ling</surname>
<given-names>Fiona Chun Man</given-names>
</name>
<xref ref-type="aff" rid="aff2">2</xref>
<xref ref-type="aff" rid="aff3">3</xref>
<xref ref-type="aff" rid="aff4">4</xref>
</contrib>
<contrib id="author-53527999" contrib-type="author"><name><surname>De Craemer</surname>
<given-names>Marieke</given-names>
</name>
<xref ref-type="aff" rid="aff5">5</xref>
</contrib>
<contrib id="author-31796033" contrib-type="author"><name><surname>van der Ploeg</surname>
<given-names>Hidde P</given-names>
</name>
<xref ref-type="aff" rid="aff6">6</xref>
</contrib>
<contrib id="author-53531991" contrib-type="author"><name><surname>O’Gorman</surname>
<given-names>Donal J</given-names>
</name>
<xref ref-type="aff" rid="aff7">7</xref>
</contrib>
<contrib id="author-55352119" contrib-type="author"><name><surname>Carlin</surname>
<given-names>Angela</given-names>
</name>
<xref ref-type="aff" rid="aff2">2</xref>
</contrib>
<contrib id="author-53527717" contrib-type="author"><name><surname>Caprinica</surname>
<given-names>Laura</given-names>
</name>
<xref ref-type="aff" rid="aff8">8</xref>
</contrib>
<contrib id="author-55352178" contrib-type="author"><name><surname>Kalter</surname>
<given-names>Joeri</given-names>
</name>
<xref ref-type="aff" rid="aff1">1</xref>
</contrib>
<contrib id="author-53534605" contrib-type="author"><name><surname>Oppert</surname>
<given-names>Jean-Michel</given-names>
</name>
<xref ref-type="aff" rid="aff9">9</xref>
</contrib>
<contrib id="author-41728748" contrib-type="author"><name><surname>Chastin</surname>
<given-names>Sebastian</given-names>
</name>
<xref ref-type="aff" rid="aff10">10</xref>
</contrib>
<contrib id="author-40454999" contrib-type="author"><name><surname>Cardon</surname>
<given-names>Greet</given-names>
</name>
<xref ref-type="aff" rid="aff5">5</xref>
</contrib>
<contrib id="author-53527596" contrib-type="author"><name><surname>Brug</surname>
<given-names>Johannes</given-names>
</name>
<xref ref-type="aff" rid="aff1">1</xref>
<xref ref-type="aff" rid="aff11">11</xref>
</contrib>
<contrib id="author-53531840" contrib-type="author"><name><surname>MacDonncha</surname>
<given-names>Ciaran</given-names>
</name>
<xref ref-type="aff" rid="aff2">2</xref>
</contrib>
</contrib-group>
<aff id="aff1"><label>1</label>
<institution content-type="department">Department of Epidemiology and Biostatistics</institution>
,<institution>AmsterdamPublic Health research institute, VU University Medical Center</institution>
,<addr-line content-type="city">Amsterdam</addr-line>
,<country>Netherlands</country>
</aff>
<aff id="aff2"><label>2</label>
<institution content-type="department">Department of Physical Education and Sport Sciences</institution>
,<institution>Centre for Physical Activity and Health Research, University of Limerick</institution>
,<addr-line content-type="city">Limerick</addr-line>
,<country>Ireland</country>
</aff>
<aff id="aff3"><label>3</label>
<institution>Institute of Sport, Exercise and Active Living, Victoria University</institution>
,<addr-line content-type="city">Melbourne</addr-line>
,<addr-line content-type="state">Victoria</addr-line>
,<country>Australia</country>
</aff>
<aff id="aff4"><label>4</label>
<institution content-type="department">Department of Psychology</institution>
,<institution>Bournemouth University</institution>
,<addr-line content-type="city">Bournemouth</addr-line>
,<country>UK</country>
</aff>
<aff id="aff5"><label>5</label>
<institution content-type="department">Department of Movement and Sports Sciences</institution>
,<institution>Ghent University</institution>
,<addr-line content-type="city">Ghent</addr-line>
,<country>Belgium</country>
</aff>
<aff id="aff6"><label>6</label>
<institution content-type="department">Department of Public and Occupational Health</institution>
,<institution>AmsterdamPublic Health research institute, VU University Medical Center</institution>
,<addr-line content-type="city">Amsterdam</addr-line>
,<country>Netherlands</country>
</aff>
<aff id="aff7"><label>7</label>
<institution content-type="department">Centre for Preventive Medicine</institution>
,<institution>School of Health and Human Performance, Dublin City University</institution>
,<addr-line content-type="city">Dublin</addr-line>
,<country>Ireland</country>
</aff>
<aff id="aff8"><label>8</label>
<institution content-type="department">Department of Movement, Human and Health Sciences</institution>
,<institution>University of Rome Foro Italico</institution>
,<addr-line content-type="city">Rome</addr-line>
,<country>Italy</country>
</aff>
<aff id="aff9"><label>9</label>
<institution content-type="department">Department of Nutrition, Pitie-Salpetriere hospital (AP-HP)</institution>
,<institution>Institute of Cardiometabolism and Nutrition (ICAN), University Pierre et Marie Curie-Paris6</institution>
,<addr-line content-type="city">Paris</addr-line>
,<country>France</country>
</aff>
<aff id="aff10"><label>10</label>
<institution>Institute of Applied Health Research, School of Health and Life Sciences, Glasgow Caledonian University</institution>
,<addr-line content-type="city">Glasgow</addr-line>
,<country>UK</country>
</aff>
<aff id="aff11"><label>11</label>
<institution>Amsterdam School for Communication Research, University of Amsterdam</institution>
,<addr-line content-type="city">Amsterdam</addr-line>
,<country>Netherlands</country>
</aff>
<author-notes><corresp><label>Correspondence to</label>
Dr Jeroen Lakerveld; <email>j.lakerveld@vumc.nl</email>
</corresp>
</author-notes>
<pub-date pub-type="collection"><year>2017</year>
</pub-date>
<pub-date pub-type="epub"><day>22</day>
<month>10</month>
<year>2017</year>
</pub-date>
<volume>7</volume>
<issue>10</issue>
<elocation-id>e017489</elocation-id>
<history><date date-type="received"><day>01</day>
<month>5</month>
<year>2017</year>
</date>
<date date-type="rev-recd"><day>17</day>
<month>8</month>
<year>2017</year>
</date>
<date date-type="accepted"><day>20</day>
<month>9</month>
<year>2017</year>
</date>
</history>
<permissions><copyright-statement>© Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2017. All rights reserved. No commercial use is permitted unless otherwise expressly granted.</copyright-statement>
<copyright-year>2017</copyright-year>
<license license-type="open-access"><license-p>This is an Open Access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by-nc/4.0/">http://creativecommons.org/licenses/by-nc/4.0/</ext-link>
</license-p>
</license>
</permissions>
<self-uri xlink:title="pdf" xlink:href="bmjopen-2017-017489.pdf"></self-uri>
<self-uri content-type="reviewers-comments-pdf" xlink:href="bmjopen-2017-017489.reviewer_comments.pdf"></self-uri>
<self-uri content-type="draft-revisions-pdf" xlink:href="bmjopen-2017-017489.draft_revisions.pdf"></self-uri>
<abstract><sec><title>Background</title>
<p>The utilisation of available cross-European data for secondary data analyses on physical activity, sedentary behaviours and their underlying determinants may benefit from the wide variation that exists across Europe in terms of these behaviours and their determinants. Such reuse of existing data for further research requires Findable; Accessible; Interoperable; Reusable (FAIR) data management and stewardship. We here describe the inventory and development of a comprehensive European dataset compendium and the process towards cross-European secondary data analyses of pooled data on physical activity, sedentary behaviour and their correlates across the life course.</p>
</sec>
<sec><title>Methods</title>
<p>A five-step methodology was followed by the European Determinants of Diet and Physical Activity (DEDIPAC) Knowledge Hub, covering the (1) identification of relevant datasets across Europe, (2) development of a compendium including details on the design, study population, measures and level of accessibility of data from each study, (3) definition of key topics and approaches for secondary analyses, (4) process of gaining access to datasets and (5) pooling and harmonisation of the data and the development of a data harmonisation platform.</p>
</sec>
<sec><title>Results</title>
<p>A total of 114 unique datasets were found for inclusion within the DEDIPAC compendium. Of these datasets, 14 were eventually obtained and reused to address 10 exemplar research questions. The DEDIPAC data harmonisation platform proved to be useful for pooling, but in general, harmonisation was often restricted to just a few core (crude) outcome variables and some individual-level sociodemographic correlates of these behaviours.</p>
</sec>
<sec><title>Conclusions</title>
<p>Obtaining, pooling and harmonising data for secondary data analyses proved to be difficult and sometimes even impossible. Compliance to FAIR data management and stewardship principles currently appears to be limited for research in the field of physical activity and sedentary behaviour. We discuss some of the reasons why this might be the case and present recommendations based on our experience.</p>
</sec>
</abstract>
<kwd-group><kwd>epidemiology</kwd>
<kwd>preventive medicine</kwd>
<kwd>public health</kwd>
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<funding-group><award-group id="funding-1"><funding-source><institution-wrap><institution>Research Foundation – Flanders</institution>
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<award-group id="funding-2"><funding-source><institution-wrap><institution>The Medical Research Council (MRC)</institution>
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</funding-source>
</award-group>
<award-group id="funding-3"><funding-source><institution-wrap><institution>Institut National de la Recherche Agronomique (INRA)</institution>
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<award-group id="funding-4"><funding-source><institution-wrap><institution>Federal Ministry of Education and Research</institution>
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<award-group id="funding-5"><funding-source><institution-wrap><institution>Ministry of Education, University and Research</institution>
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<award-group id="funding-6"><funding-source><institution-wrap><institution>: The Netherlands Organisation for Health Research and Development (ZonMw)</institution>
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</funding-source>
</award-group>
<award-group id="funding-7"><funding-source><institution-wrap><institution>The Health Research Board (HRB)</institution>
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<affiliations><list><country><li>Australie</li>
<li>Belgique</li>
<li>France</li>
<li>Irlande (pays)</li>
<li>Italie</li>
<li>Pays-Bas</li>
<li>Royaume-Uni</li>
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<tree><country name="Pays-Bas"><noRegion><name sortKey="Lakerveld, Jeroen" sort="Lakerveld, Jeroen" uniqKey="Lakerveld J" first="Jeroen" last="Lakerveld">Jeroen Lakerveld</name>
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<name sortKey="Brug, Johannes" sort="Brug, Johannes" uniqKey="Brug J" first="Johannes" last="Brug">Johannes Brug</name>
<name sortKey="Kalter, Joeri" sort="Kalter, Joeri" uniqKey="Kalter J" first="Joeri" last="Kalter">Joeri Kalter</name>
<name sortKey="Loyen, Anne" sort="Loyen, Anne" uniqKey="Loyen A" first="Anne" last="Loyen">Anne Loyen</name>
<name sortKey="Van Der Ploeg, Hidde P" sort="Van Der Ploeg, Hidde P" uniqKey="Van Der Ploeg H" first="Hidde P" last="Van Der Ploeg">Hidde P. Van Der Ploeg</name>
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<country name="Irlande (pays)"><noRegion><name sortKey="Ling, Fiona Chun Man" sort="Ling, Fiona Chun Man" uniqKey="Ling F" first="Fiona Chun Man" last="Ling">Fiona Chun Man Ling</name>
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<name sortKey="Carlin, Angela" sort="Carlin, Angela" uniqKey="Carlin A" first="Angela" last="Carlin">Angela Carlin</name>
<name sortKey="Macdonncha, Ciaran" sort="Macdonncha, Ciaran" uniqKey="Macdonncha C" first="Ciaran" last="Macdonncha">Ciaran Macdonncha</name>
<name sortKey="O Orman, Donal J" sort="O Orman, Donal J" uniqKey="O Orman D" first="Donal J" last="O Orman">Donal J. O Orman</name>
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<country name="Australie"><noRegion><name sortKey="Ling, Fiona Chun Man" sort="Ling, Fiona Chun Man" uniqKey="Ling F" first="Fiona Chun Man" last="Ling">Fiona Chun Man Ling</name>
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<country name="Royaume-Uni"><noRegion><name sortKey="Ling, Fiona Chun Man" sort="Ling, Fiona Chun Man" uniqKey="Ling F" first="Fiona Chun Man" last="Ling">Fiona Chun Man Ling</name>
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<name sortKey="Chastin, Sebastian" sort="Chastin, Sebastian" uniqKey="Chastin S" first="Sebastian" last="Chastin">Sebastian Chastin</name>
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<country name="Belgique"><noRegion><name sortKey="De Craemer, Marieke" sort="De Craemer, Marieke" uniqKey="De Craemer M" first="Marieke" last="De Craemer">Marieke De Craemer</name>
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<name sortKey="Cardon, Greet" sort="Cardon, Greet" uniqKey="Cardon G" first="Greet" last="Cardon">Greet Cardon</name>
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<country name="Italie"><noRegion><name sortKey="Caprinica, Laura" sort="Caprinica, Laura" uniqKey="Caprinica L" first="Laura" last="Caprinica">Laura Caprinica</name>
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<country name="France"><noRegion><name sortKey="Oppert, Jean Michel" sort="Oppert, Jean Michel" uniqKey="Oppert J" first="Jean-Michel" last="Oppert">Jean-Michel Oppert</name>
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