Arabidopsis tRNA Adenosine Deaminase Arginine Edits the Wobble Nucleotide of Chloroplast tRNAArg(ACG) and Is Essential for Efficient Chloroplast Translation[W]
Identifieur interne : 007C71 ( Main/Exploration ); précédent : 007C70; suivant : 007C72Arabidopsis tRNA Adenosine Deaminase Arginine Edits the Wobble Nucleotide of Chloroplast tRNAArg(ACG) and Is Essential for Efficient Chloroplast Translation[W]
Auteurs : Etienne Delannoy [Australie] ; Monique Le Ret [France] ; Emmanuelle Faivre-Nitschke [France] ; Gonzalo M. Estavillo [Australie] ; Marc Bergdoll [France] ; Nicolas L. Taylor [Australie] ; Barry J. Pogson [Australie] ; Ian Small [Australie] ; Patrice Imbault [France] ; José M. Gualberto [Australie, France]Source :
- The Plant Cell [ 1040-4651 ] ; 2009.
Abstract
RNA editing changes the coding/decoding information relayed by transcripts via nucleotide insertion, deletion, or conversion. Editing of tRNA anticodons by deamination of adenine to inosine is used both by eukaryotes and prokaryotes to expand the decoding capacity of individual tRNAs. This limits the number of tRNA species required for codon-anticodon recognition. We have identified the
Url:
DOI: 10.1105/tpc.109.066654
PubMed: 19602623
PubMed Central: 2729595
Affiliations:
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xml:lang="fr">Australie</country><wicri:regionArea>Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, 6008 WA</wicri:regionArea><wicri:noRegion>6008 WA</wicri:noRegion></affiliation></author><author><name sortKey="Le Ret, Monique" sort="Le Ret, Monique" uniqKey="Le Ret M" first="Monique" last="Le Ret">Monique Le Ret</name><affiliation wicri:level="4"><nlm:aff id="aff2">Institut de Biologie Moléculaire des Plantes du Centre National de la Recherche Scientifique, Université de Strasbourg, 67084 Strasbourg Cedex, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Institut de Biologie Moléculaire des Plantes du Centre National de la Recherche Scientifique, Université de Strasbourg, 67084 Strasbourg Cedex</wicri:regionArea><wicri:noRegion>67084 Strasbourg Cedex</wicri:noRegion><orgName type="university">Université de Strasbourg</orgName><placeName><settlement type="city">Strasbourg</settlement><region type="region" nuts="2">Grand Est</region><region type="old region" nuts="2">Alsace (région administrative)</region></placeName></affiliation></author><author><name sortKey="Faivre Nitschke, Emmanuelle" sort="Faivre Nitschke, Emmanuelle" uniqKey="Faivre Nitschke E" first="Emmanuelle" last="Faivre-Nitschke">Emmanuelle Faivre-Nitschke</name><affiliation wicri:level="4"><nlm:aff id="aff2">Institut de Biologie Moléculaire des Plantes du Centre National de la Recherche Scientifique, Université de Strasbourg, 67084 Strasbourg Cedex, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Institut de Biologie Moléculaire des Plantes du Centre National de la Recherche Scientifique, Université de Strasbourg, 67084 Strasbourg Cedex</wicri:regionArea><wicri:noRegion>67084 Strasbourg Cedex</wicri:noRegion><orgName type="university">Université de Strasbourg</orgName><placeName><settlement type="city">Strasbourg</settlement><region type="region" nuts="2">Grand Est</region><region type="old region" nuts="2">Alsace (région administrative)</region></placeName></affiliation></author><author><name sortKey="Estavillo, Gonzalo M" sort="Estavillo, Gonzalo M" uniqKey="Estavillo G" first="Gonzalo M." last="Estavillo">Gonzalo M. Estavillo</name><affiliation wicri:level="1"><nlm:aff id="aff3">Australian Research Council Centre of Excellence in Plant Energy Biology, School of Biology, Australian National University, Canberra, 0200 ACT, Australia</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Australian Research Council Centre of Excellence in Plant Energy Biology, School of Biology, Australian National University, Canberra, 0200 ACT</wicri:regionArea><wicri:noRegion>0200 ACT</wicri:noRegion></affiliation></author><author><name sortKey="Bergdoll, Marc" sort="Bergdoll, Marc" uniqKey="Bergdoll M" first="Marc" last="Bergdoll">Marc Bergdoll</name><affiliation wicri:level="4"><nlm:aff id="aff2">Institut de Biologie Moléculaire des Plantes du Centre National de la Recherche Scientifique, Université de Strasbourg, 67084 Strasbourg Cedex, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Institut de Biologie Moléculaire des Plantes du Centre National de la Recherche Scientifique, Université de Strasbourg, 67084 Strasbourg Cedex</wicri:regionArea><wicri:noRegion>67084 Strasbourg Cedex</wicri:noRegion><orgName type="university">Université de Strasbourg</orgName><placeName><settlement type="city">Strasbourg</settlement><region type="region" nuts="2">Grand Est</region><region type="old region" nuts="2">Alsace (région administrative)</region></placeName></affiliation></author><author><name sortKey="Taylor, Nicolas L" sort="Taylor, Nicolas L" uniqKey="Taylor N" first="Nicolas L." last="Taylor">Nicolas L. Taylor</name><affiliation wicri:level="1"><nlm:aff id="aff1">Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, 6008 WA, Australia</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, 6008 WA</wicri:regionArea><wicri:noRegion>6008 WA</wicri:noRegion></affiliation></author><author><name sortKey="Pogson, Barry J" sort="Pogson, Barry J" uniqKey="Pogson B" first="Barry J." last="Pogson">Barry J. Pogson</name><affiliation wicri:level="1"><nlm:aff id="aff3">Australian Research Council Centre of Excellence in Plant Energy Biology, School of Biology, Australian National University, Canberra, 0200 ACT, Australia</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Australian Research Council Centre of Excellence in Plant Energy Biology, School of Biology, Australian National University, Canberra, 0200 ACT</wicri:regionArea><wicri:noRegion>0200 ACT</wicri:noRegion></affiliation></author><author><name sortKey="Small, Ian" sort="Small, Ian" uniqKey="Small I" first="Ian" last="Small">Ian Small</name><affiliation wicri:level="1"><nlm:aff id="aff1">Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, 6008 WA, Australia</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, 6008 WA</wicri:regionArea><wicri:noRegion>6008 WA</wicri:noRegion></affiliation></author><author><name sortKey="Imbault, Patrice" sort="Imbault, Patrice" uniqKey="Imbault P" first="Patrice" last="Imbault">Patrice Imbault</name><affiliation wicri:level="4"><nlm:aff id="aff2">Institut de Biologie Moléculaire des Plantes du Centre National de la Recherche Scientifique, Université de Strasbourg, 67084 Strasbourg Cedex, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Institut de Biologie Moléculaire des Plantes du Centre National de la Recherche Scientifique, Université de Strasbourg, 67084 Strasbourg Cedex</wicri:regionArea><wicri:noRegion>67084 Strasbourg Cedex</wicri:noRegion><orgName type="university">Université de Strasbourg</orgName><placeName><settlement type="city">Strasbourg</settlement><region type="region" nuts="2">Grand Est</region><region type="old region" nuts="2">Alsace (région administrative)</region></placeName></affiliation></author><author><name sortKey="Gualberto, Jose M" sort="Gualberto, Jose M" uniqKey="Gualberto J" first="José M." last="Gualberto">José M. Gualberto</name><affiliation wicri:level="1"><nlm:aff id="aff1">Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, 6008 WA, Australia</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, 6008 WA</wicri:regionArea><wicri:noRegion>6008 WA</wicri:noRegion></affiliation><affiliation wicri:level="4"><nlm:aff id="aff2">Institut de Biologie Moléculaire des Plantes du Centre National de la Recherche Scientifique, Université de Strasbourg, 67084 Strasbourg Cedex, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>Institut de Biologie Moléculaire des Plantes du Centre National de la Recherche Scientifique, Université de Strasbourg, 67084 Strasbourg Cedex</wicri:regionArea><wicri:noRegion>67084 Strasbourg Cedex</wicri:noRegion><orgName type="university">Université de Strasbourg</orgName><placeName><settlement type="city">Strasbourg</settlement><region type="region" nuts="2">Grand Est</region><region type="old region" nuts="2">Alsace (région administrative)</region></placeName></affiliation></author></analytic><series><title level="j">The Plant Cell</title><idno type="ISSN">1040-4651</idno><idno type="eISSN">1532-298X</idno><imprint><date when="2009">2009</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>RNA editing changes the coding/decoding information relayed by transcripts via nucleotide insertion, deletion, or conversion. Editing of tRNA anticodons by deamination of adenine to inosine is used both by eukaryotes and prokaryotes to expand the decoding capacity of individual tRNAs. This limits the number of tRNA species required for codon-anticodon recognition. We have identified the <italic>Arabidopsis thaliana</italic> gene that codes for tRNA adenosine deaminase arginine (TADA), a chloroplast tRNA editing protein specifically required for deamination of chloroplast (cp)-tRNA<sup>Arg</sup>(ACG) to cp-tRNA<sup>Arg</sup>(ICG). Land plant TADAs have a C-terminal domain similar in sequence and predicted structure to prokaryotic tRNA deaminases and also have very long N-terminal extensions of unknown origin and function. Biochemical and mutant complementation studies showed that the C-terminal domain is sufficient for cognate tRNA deamination both in vitro and in planta. Disruption of <italic>TADA</italic> has profound effects on chloroplast translation efficiency, leading to reduced yields of chloroplast-encoded proteins and impaired photosynthetic function. By contrast, chloroplast transcripts accumulate to levels significantly above those of wild-type plants. Nevertheless, absence of cp-tRNA<sup>Arg</sup>(ICG) is compatible with plant survival, implying that two out of three CGN codon recognition occurs in chloroplasts, though this mechanism is less efficient than wobble pairing.</p></div></front></TEI><affiliations><list><country><li>Australie</li><li>France</li></country><region><li>Alsace (région administrative)</li><li>Grand Est</li></region><settlement><li>Strasbourg</li></settlement><orgName><li>Université de Strasbourg</li></orgName></list><tree><country name="Australie"><noRegion><name sortKey="Delannoy, Etienne" sort="Delannoy, Etienne" uniqKey="Delannoy E" first="Etienne" last="Delannoy">Etienne Delannoy</name></noRegion><name sortKey="Estavillo, Gonzalo M" sort="Estavillo, Gonzalo M" uniqKey="Estavillo G" first="Gonzalo M." last="Estavillo">Gonzalo M. Estavillo</name><name sortKey="Gualberto, Jose M" sort="Gualberto, Jose M" uniqKey="Gualberto J" first="José M." last="Gualberto">José M. Gualberto</name><name sortKey="Pogson, Barry J" sort="Pogson, Barry J" uniqKey="Pogson B" first="Barry J." last="Pogson">Barry J. Pogson</name><name sortKey="Small, Ian" sort="Small, Ian" uniqKey="Small I" first="Ian" last="Small">Ian Small</name><name sortKey="Taylor, Nicolas L" sort="Taylor, Nicolas L" uniqKey="Taylor N" first="Nicolas L." last="Taylor">Nicolas L. Taylor</name></country><country name="France"><region name="Grand Est"><name sortKey="Le Ret, Monique" sort="Le Ret, Monique" uniqKey="Le Ret M" first="Monique" last="Le Ret">Monique Le Ret</name></region><name sortKey="Bergdoll, Marc" sort="Bergdoll, Marc" uniqKey="Bergdoll M" first="Marc" last="Bergdoll">Marc Bergdoll</name><name sortKey="Faivre Nitschke, Emmanuelle" sort="Faivre Nitschke, Emmanuelle" uniqKey="Faivre Nitschke E" first="Emmanuelle" last="Faivre-Nitschke">Emmanuelle Faivre-Nitschke</name><name sortKey="Gualberto, Jose M" sort="Gualberto, Jose M" uniqKey="Gualberto J" first="José M." last="Gualberto">José M. Gualberto</name><name sortKey="Imbault, Patrice" sort="Imbault, Patrice" uniqKey="Imbault P" first="Patrice" last="Imbault">Patrice Imbault</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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