Genome-wide identification of sweet orange (Citrus sinensis) histone modification gene families and their expression analysis during the fruit development and fruit-blue mold infection process
Identifieur interne : 001C78 ( Ncbi/Merge ); précédent : 001C77; suivant : 001C79Genome-wide identification of sweet orange (Citrus sinensis) histone modification gene families and their expression analysis during the fruit development and fruit-blue mold infection process
Auteurs : Jidi Xu ; Haidan Xu ; Yuanlong Liu ; Xia Wang ; Qiang Xu ; Xiuxin DengSource :
- Frontiers in Plant Science [ 1664-462X ] ; 2015.
Abstract
In eukaryotes, histone acetylation and methylation have been known to be involved in regulating diverse developmental processes and plant defense. These histone modification events are controlled by a series of histone modification gene families. To date, there is no study regarding genome-wide characterization of histone modification related genes in citrus species. Based on the two recent sequenced sweet orange genome databases, a total of 136
Url:
DOI: 10.3389/fpls.2015.00607
PubMed: 26300904
PubMed Central: 4525380
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: 000077
- to stream Pmc, to step Curation: 000077
- to stream Pmc, to step Checkpoint: 000483
- to stream PubMed, to step Corpus: 000144
- to stream PubMed, to step Curation: 000144
- to stream PubMed, to step Checkpoint: 000144
Links to Exploration step
PMC:4525380Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genome-wide identification of sweet orange (<italic>Citrus sinensis</italic>) histone modification gene families and their expression analysis during the fruit development and fruit-blue mold infection process</title><author><name sortKey="Xu, Jidi" sort="Xu, Jidi" uniqKey="Xu J" first="Jidi" last="Xu">Jidi Xu</name></author><author><name sortKey="Xu, Haidan" sort="Xu, Haidan" uniqKey="Xu H" first="Haidan" last="Xu">Haidan Xu</name></author><author><name sortKey="Liu, Yuanlong" sort="Liu, Yuanlong" uniqKey="Liu Y" first="Yuanlong" last="Liu">Yuanlong Liu</name></author><author><name sortKey="Wang, Xia" sort="Wang, Xia" uniqKey="Wang X" first="Xia" last="Wang">Xia Wang</name></author><author><name sortKey="Xu, Qiang" sort="Xu, Qiang" uniqKey="Xu Q" first="Qiang" last="Xu">Qiang Xu</name></author><author><name sortKey="Deng, Xiuxin" sort="Deng, Xiuxin" uniqKey="Deng X" first="Xiuxin" last="Deng">Xiuxin Deng</name></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">26300904</idno><idno type="pmc">4525380</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4525380</idno><idno type="RBID">PMC:4525380</idno><idno type="doi">10.3389/fpls.2015.00607</idno><date when="2015">2015</date><idno type="wicri:Area/Pmc/Corpus">000077</idno><idno type="wicri:Area/Pmc/Curation">000077</idno><idno type="wicri:Area/Pmc/Checkpoint">000483</idno><idno type="wicri:source">PubMed</idno><idno type="wicri:Area/PubMed/Corpus">000144</idno><idno type="wicri:Area/PubMed/Curation">000144</idno><idno type="wicri:Area/PubMed/Checkpoint">000144</idno><idno type="wicri:Area/Ncbi/Merge">001C78</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Genome-wide identification of sweet orange (<italic>Citrus sinensis</italic>) histone modification gene families and their expression analysis during the fruit development and fruit-blue mold infection process</title><author><name sortKey="Xu, Jidi" sort="Xu, Jidi" uniqKey="Xu J" first="Jidi" last="Xu">Jidi Xu</name></author><author><name sortKey="Xu, Haidan" sort="Xu, Haidan" uniqKey="Xu H" first="Haidan" last="Xu">Haidan Xu</name></author><author><name sortKey="Liu, Yuanlong" sort="Liu, Yuanlong" uniqKey="Liu Y" first="Yuanlong" last="Liu">Yuanlong Liu</name></author><author><name sortKey="Wang, Xia" sort="Wang, Xia" uniqKey="Wang X" first="Xia" last="Wang">Xia Wang</name></author><author><name sortKey="Xu, Qiang" sort="Xu, Qiang" uniqKey="Xu Q" first="Qiang" last="Xu">Qiang Xu</name></author><author><name sortKey="Deng, Xiuxin" sort="Deng, Xiuxin" uniqKey="Deng X" first="Xiuxin" last="Deng">Xiuxin Deng</name></author></analytic><series><title level="j">Frontiers in Plant Science</title><idno type="eISSN">1664-462X</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>In eukaryotes, histone acetylation and methylation have been known to be involved in regulating diverse developmental processes and plant defense. These histone modification events are controlled by a series of histone modification gene families. To date, there is no study regarding genome-wide characterization of histone modification related genes in citrus species. Based on the two recent sequenced sweet orange genome databases, a total of 136 <italic>CsHMs</italic> (<italic>Citrus sinensis</italic> histone modification genes), including 47 <italic>CsHMTs</italic> (histone methyltransferase genes), 23 <italic>CsHDMs</italic> (histone demethylase genes), 50 <italic>CsHATs</italic> (histone acetyltransferase genes), and 16 <italic>CsHDACs</italic> (histone deacetylase genes) were identified. These genes were categorized to 11 gene families. A comprehensive analysis of these 11 gene families was performed with chromosome locations, phylogenetic comparison, gene structures, and conserved domain compositions of proteins. In order to gain an insight into the potential roles of these genes in citrus fruit development, 42 <italic>CsHMs</italic> with high mRNA abundance in fruit tissues were selected to further analyze their expression profiles at six stages of fruit development. Interestingly, a numbers of genes were expressed highly in flesh of ripening fruit and some of them showed the increasing expression levels along with the fruit development. Furthermore, we analyzed the expression patterns of all 136 <italic>CsHMs</italic> response to the infection of blue mold (<italic>Penicillium digitatum</italic>), which is the most devastating pathogen in citrus post-harvest process. The results indicated that 20 of them showed the strong alterations of their expression levels during the fruit-pathogen infection. In conclusion, this study presents a comprehensive analysis of the histone modification gene families in sweet orange and further elucidates their behaviors during the fruit development and the blue mold infection responses.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Ahmad, A" uniqKey="Ahmad A">A. Ahmad</name></author><author><name sortKey="Cao, X" uniqKey="Cao X">X. Cao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Aiese Cigliano, R" uniqKey="Aiese Cigliano R">R. Aiese Cigliano</name></author><author><name sortKey="Sanseverino, W" uniqKey="Sanseverino W">W. Sanseverino</name></author><author><name sortKey="Cremona, G" uniqKey="Cremona G">G. Cremona</name></author><author><name sortKey="Ercolano, M R" uniqKey="Ercolano M">M. R. Ercolano</name></author><author><name sortKey="Conicella, C" uniqKey="Conicella C">C. Conicella</name></author><author><name sortKey="Consiglio, F M" uniqKey="Consiglio F">F. M. Consiglio</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Alinsug, M V" uniqKey="Alinsug M">M. V. Alinsug</name></author><author><name sortKey="Yu, C W" uniqKey="Yu C">C. W. Yu</name></author><author><name sortKey="Wu, K" uniqKey="Wu K">K. Wu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Alvarez, M E" uniqKey="Alvarez M">M. E. Alvarez</name></author><author><name sortKey="Nota, F" uniqKey="Nota F">F. Nota</name></author><author><name sortKey="Cambiagno, D A" uniqKey="Cambiagno D">D. A. Cambiagno</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Alvarez Venegas, R" uniqKey="Alvarez Venegas R">R. Alvarez-Venegas</name></author><author><name sortKey="Al Abdallat, A" uniqKey="Al Abdallat A">A. Al Abdallat</name></author><author><name sortKey="Guo, M" uniqKey="Guo M">M. Guo</name></author><author><name sortKey="Alfano, J R" uniqKey="Alfano J">J. R. Alfano</name></author><author><name sortKey="Avramova, Z" uniqKey="Avramova Z">Z. Avramova</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Aquea, F" uniqKey="Aquea F">F. Aquea</name></author><author><name sortKey="Vega, A" uniqKey="Vega A">A. Vega</name></author><author><name sortKey="Timmermann, T" uniqKey="Timmermann T">T. Timmermann</name></author><author><name sortKey="Poupin, M J" uniqKey="Poupin M">M. J. Poupin</name></author><author><name sortKey="Arce Johnson, P" uniqKey="Arce Johnson P">P. Arce-Johnson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bain, J M" uniqKey="Bain J">J. M. Bain</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Berger, S L" uniqKey="Berger S">S. L. Berger</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Berr, A" uniqKey="Berr A">A. Berr</name></author><author><name sortKey="Mccallum, E J" uniqKey="Mccallum E">E. J. Mccallum</name></author><author><name sortKey="Alioua, A" uniqKey="Alioua A">A. Alioua</name></author><author><name sortKey="Heintz, D" uniqKey="Heintz D">D. Heintz</name></author><author><name sortKey="Heitz, T" uniqKey="Heitz T">T. Heitz</name></author><author><name sortKey="Shen, W H" uniqKey="Shen W">W. H. Shen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Berr, A" uniqKey="Berr A">A. Berr</name></author><author><name sortKey="Mccallum, E J" uniqKey="Mccallum E">E. J. Mccallum</name></author><author><name sortKey="Menard, R" uniqKey="Menard R">R. Menard</name></author><author><name sortKey="Meyer, D" uniqKey="Meyer D">D. Meyer</name></author><author><name sortKey="Fuchs, J" uniqKey="Fuchs J">J. Fuchs</name></author><author><name sortKey="Dong, A W" uniqKey="Dong A">A. W. Dong</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Berr, A" uniqKey="Berr A">A. Berr</name></author><author><name sortKey="Shafiq, S" uniqKey="Shafiq S">S. Shafiq</name></author><author><name sortKey="Shen, W H" uniqKey="Shen W">W. H. Shen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cazzonelli, C I" uniqKey="Cazzonelli C">C. I. Cazzonelli</name></author><author><name sortKey="Cuttriss, A J" uniqKey="Cuttriss A">A. J. Cuttriss</name></author><author><name sortKey="Cossetto, S B" uniqKey="Cossetto S">S. B. Cossetto</name></author><author><name sortKey="Pye, W" uniqKey="Pye W">W. Pye</name></author><author><name sortKey="Crisp, P" uniqKey="Crisp P">P. Crisp</name></author><author><name sortKey="Whelan, J" uniqKey="Whelan J">J. Whelan</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cazzonelli, C I" uniqKey="Cazzonelli C">C. I. Cazzonelli</name></author><author><name sortKey="Nisar, N" uniqKey="Nisar N">N. Nisar</name></author><author><name sortKey="Roberts, A C" uniqKey="Roberts A">A. C. Roberts</name></author><author><name sortKey="Murray, K D" uniqKey="Murray K">K. D. Murray</name></author><author><name sortKey="Borevitz, J O" uniqKey="Borevitz J">J. O. Borevitz</name></author><author><name sortKey="Pogson, B J" uniqKey="Pogson B">B. J. Pogson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, X" uniqKey="Chen X">X. Chen</name></author><author><name sortKey="Hu, Y" uniqKey="Hu Y">Y. Hu</name></author><author><name sortKey="Zhou, D X" uniqKey="Zhou D">D. X. Zhou</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, Z J" uniqKey="Chen Z">Z. J. Chen</name></author><author><name sortKey="Tian, L" uniqKey="Tian L">L. Tian</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Choi, S M" uniqKey="Choi S">S. M. Choi</name></author><author><name sortKey="Song, H R" uniqKey="Song H">H. R. Song</name></author><author><name sortKey="Han, S K" uniqKey="Han S">S. K. Han</name></author><author><name sortKey="Han, M" uniqKey="Han M">M. Han</name></author><author><name sortKey="Kim, C Y" uniqKey="Kim C">C. Y. Kim</name></author><author><name sortKey="Park, J" uniqKey="Park J">J. Park</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cigliano, R A" uniqKey="Cigliano R">R. A. Cigliano</name></author><author><name sortKey="Cremona, G" uniqKey="Cremona G">G. Cremona</name></author><author><name sortKey="Paparo, R" uniqKey="Paparo R">R. Paparo</name></author><author><name sortKey="Termolino, P" uniqKey="Termolino P">P. Termolino</name></author><author><name sortKey="Perrella, G" uniqKey="Perrella G">G. Perrella</name></author><author><name sortKey="Gutzat, R" uniqKey="Gutzat R">R. Gutzat</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Deal, R B" uniqKey="Deal R">R. B. Deal</name></author><author><name sortKey="Henikoff, S" uniqKey="Henikoff S">S. Henikoff</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dong, G F" uniqKey="Dong G">G. F. Dong</name></author><author><name sortKey="Ma, D P" uniqKey="Ma D">D. P. Ma</name></author><author><name sortKey="Li, J X" uniqKey="Li J">J. X. Li</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Feng, Q" uniqKey="Feng Q">Q. Feng</name></author><author><name sortKey="Wang, H B" uniqKey="Wang H">H. B. Wang</name></author><author><name sortKey="Ng, H H" uniqKey="Ng H">H. H. Ng</name></author><author><name sortKey="Erdjument Bromage, H" uniqKey="Erdjument Bromage H">H. Erdjument-Bromage</name></author><author><name sortKey="Tempst, P" uniqKey="Tempst P">P. Tempst</name></author><author><name sortKey="Struhl, K" uniqKey="Struhl K">K. Struhl</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gu, X F" uniqKey="Gu X">X. F. Gu</name></author><author><name sortKey="Xu, T D" uniqKey="Xu T">T. D. Xu</name></author><author><name sortKey="He, Y H" uniqKey="He Y">Y. H. He</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ho, L" uniqKey="Ho L">L. Ho</name></author><author><name sortKey="Crabtree, G R" uniqKey="Crabtree G">G. R. Crabtree</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hollender, C" uniqKey="Hollender C">C. Hollender</name></author><author><name sortKey="Liu, Z C" uniqKey="Liu Z">Z. C. Liu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jiang, D" uniqKey="Jiang D">D. Jiang</name></author><author><name sortKey="Yang, W" uniqKey="Yang W">W. Yang</name></author><author><name sortKey="He, Y" uniqKey="He Y">Y. He</name></author><author><name sortKey="Amasino, R M" uniqKey="Amasino R">R. M. Amasino</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kato, M" uniqKey="Kato M">M. Kato</name></author><author><name sortKey="Ikoma, Y" uniqKey="Ikoma Y">Y. Ikoma</name></author><author><name sortKey="Matsumoto, H" uniqKey="Matsumoto H">H. Matsumoto</name></author><author><name sortKey="Sugiura, M" uniqKey="Sugiura M">M. Sugiura</name></author><author><name sortKey="Hyodo, H" uniqKey="Hyodo H">H. Hyodo</name></author><author><name sortKey="Yano, M" uniqKey="Yano M">M. Yano</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kim, J M" uniqKey="Kim J">J. M. Kim</name></author><author><name sortKey="Sasaki, T" uniqKey="Sasaki T">T. Sasaki</name></author><author><name sortKey="Ueda, M" uniqKey="Ueda M">M. Ueda</name></author><author><name sortKey="Sako, K" uniqKey="Sako K">K. Sako</name></author><author><name sortKey="Seki, M" uniqKey="Seki M">M. Seki</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kim, J M" uniqKey="Kim J">J. M. Kim</name></author><author><name sortKey="To, T K" uniqKey="To T">T. K. To</name></author><author><name sortKey="Nishioka, T" uniqKey="Nishioka T">T. Nishioka</name></author><author><name sortKey="Seki, M" uniqKey="Seki M">M. Seki</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kim, S" uniqKey="Kim S">S. Kim</name></author><author><name sortKey="Lee, J" uniqKey="Lee J">J. Lee</name></author><author><name sortKey="Yang, J Y" uniqKey="Yang J">J. Y. Yang</name></author><author><name sortKey="Jung, C" uniqKey="Jung C">C. Jung</name></author><author><name sortKey="Chua, N H" uniqKey="Chua N">N. H. Chua</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kim, W" uniqKey="Kim W">W. Kim</name></author><author><name sortKey="Latrasse, D" uniqKey="Latrasse D">D. Latrasse</name></author><author><name sortKey="Servet, C" uniqKey="Servet C">C. Servet</name></author><author><name sortKey="Zhou, D X" uniqKey="Zhou D">D. X. Zhou</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Krogan, N T" uniqKey="Krogan N">N. T. Krogan</name></author><author><name sortKey="Hogan, K" uniqKey="Hogan K">K. Hogan</name></author><author><name sortKey="Long, J A" uniqKey="Long J">J. A. Long</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, C" uniqKey="Liu C">C. Liu</name></author><author><name sortKey="Lu, F" uniqKey="Lu F">F. Lu</name></author><author><name sortKey="Cui, X" uniqKey="Cui X">X. Cui</name></author><author><name sortKey="Cao, X" uniqKey="Cao X">X. Cao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, Q" uniqKey="Liu Q">Q. Liu</name></author><author><name sortKey="Xu, J" uniqKey="Xu J">J. Xu</name></author><author><name sortKey="Liu, Y" uniqKey="Liu Y">Y. Liu</name></author><author><name sortKey="Zhao, X" uniqKey="Zhao X">X. Zhao</name></author><author><name sortKey="Deng, X" uniqKey="Deng X">X. Deng</name></author><author><name sortKey="Guo, L" uniqKey="Guo L">L. Guo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, Y" uniqKey="Liu Y">Y. Liu</name></author><author><name sortKey="Liu, Q" uniqKey="Liu Q">Q. Liu</name></author><author><name sortKey="Tao, N" uniqKey="Tao N">N. Tao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lu, F" uniqKey="Lu F">F. Lu</name></author><author><name sortKey="Cui, X" uniqKey="Cui X">X. Cui</name></author><author><name sortKey="Zhang, S" uniqKey="Zhang S">S. Zhang</name></author><author><name sortKey="Liu, C" uniqKey="Liu C">C. Liu</name></author><author><name sortKey="Cao, X" uniqKey="Cao X">X. Cao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lu, F" uniqKey="Lu F">F. Lu</name></author><author><name sortKey="Li, G" uniqKey="Li G">G. Li</name></author><author><name sortKey="Cui, X" uniqKey="Cui X">X. Cui</name></author><author><name sortKey="Liu, C" uniqKey="Liu C">C. Liu</name></author><author><name sortKey="Wang, X J" uniqKey="Wang X">X. J. Wang</name></author><author><name sortKey="Cao, X" uniqKey="Cao X">X. Cao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Luo, M" uniqKey="Luo M">M. Luo</name></author><author><name sortKey="Liu, X C" uniqKey="Liu X">X. C. Liu</name></author><author><name sortKey="Singh, P" uniqKey="Singh P">P. Singh</name></author><author><name sortKey="Cui, Y H" uniqKey="Cui Y">Y. H. Cui</name></author><author><name sortKey="Zimmerli, L" uniqKey="Zimmerli L">L. Zimmerli</name></author><author><name sortKey="Wu, K Q" uniqKey="Wu K">K. Q. Wu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ma, X" uniqKey="Ma X">X. Ma</name></author><author><name sortKey="Lv, S" uniqKey="Lv S">S. Lv</name></author><author><name sortKey="Zhang, C" uniqKey="Zhang C">C. Zhang</name></author><author><name sortKey="Yang, C" uniqKey="Yang C">C. Yang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Macarisin, D" uniqKey="Macarisin D">D. Macarisin</name></author><author><name sortKey="Cohen, L" uniqKey="Cohen L">L. Cohen</name></author><author><name sortKey="Eick, A" uniqKey="Eick A">A. Eick</name></author><author><name sortKey="Rafael, G" uniqKey="Rafael G">G. Rafael</name></author><author><name sortKey="Belausov, E" uniqKey="Belausov E">E. Belausov</name></author><author><name sortKey="Wisniewski, M" uniqKey="Wisniewski M">M. Wisniewski</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ning, Y Q" uniqKey="Ning Y">Y.-Q. Ning</name></author><author><name sortKey="Ma, Z Y" uniqKey="Ma Z">Z.-Y. Ma</name></author><author><name sortKey="Huang, H W" uniqKey="Huang H">H.-W. Huang</name></author><author><name sortKey="Mo, H" uniqKey="Mo H">H. Mo</name></author><author><name sortKey="Zhao, T T" uniqKey="Zhao T">T.-T. Zhao</name></author><author><name sortKey="Li, L" uniqKey="Li L">L. Li</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Niu, L" uniqKey="Niu L">L. Niu</name></author><author><name sortKey="Zhang, Y" uniqKey="Zhang Y">Y. Zhang</name></author><author><name sortKey="Pei, Y" uniqKey="Pei Y">Y. Pei</name></author><author><name sortKey="Liu, C" uniqKey="Liu C">C. Liu</name></author><author><name sortKey="Cao, X" uniqKey="Cao X">X. Cao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pahlich, S" uniqKey="Pahlich S">S. Pahlich</name></author><author><name sortKey="Zakaryan, R P" uniqKey="Zakaryan R">R. P. Zakaryan</name></author><author><name sortKey="Gehring, H" uniqKey="Gehring H">H. Gehring</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pandey, R" uniqKey="Pandey R">R. Pandey</name></author><author><name sortKey="Muller, A" uniqKey="Muller A">A. Muller</name></author><author><name sortKey="Napoli, C A" uniqKey="Napoli C">C. A. Napoli</name></author><author><name sortKey="Selinger, D A" uniqKey="Selinger D">D. A. Selinger</name></author><author><name sortKey="Pikaard, C S" uniqKey="Pikaard C">C. S. Pikaard</name></author><author><name sortKey="Richards, E J" uniqKey="Richards E">E. J. Richards</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Patel, D J" uniqKey="Patel D">D. J. Patel</name></author><author><name sortKey="Wang, Z" uniqKey="Wang Z">Z. Wang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pei, Y" uniqKey="Pei Y">Y. Pei</name></author><author><name sortKey="Niu, L" uniqKey="Niu L">L. Niu</name></author><author><name sortKey="Lu, F" uniqKey="Lu F">F. Lu</name></author><author><name sortKey="Liu, C" uniqKey="Liu C">C. Liu</name></author><author><name sortKey="Zhai, J" uniqKey="Zhai J">J. Zhai</name></author><author><name sortKey="Kong, X" uniqKey="Kong X">X. Kong</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rouseff, R" uniqKey="Rouseff R">R. Rouseff</name></author><author><name sortKey="Raley, L" uniqKey="Raley L">L. Raley</name></author><author><name sortKey="Hofsommer, H J" uniqKey="Hofsommer H">H.-J. Hofsommer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Saeed, A I" uniqKey="Saeed A">A. I. Saeed</name></author><author><name sortKey="Hagabati, N K" uniqKey="Hagabati N">N. K. Hagabati</name></author><author><name sortKey="Braisted, J C" uniqKey="Braisted J">J. C. Braisted</name></author><author><name sortKey="Liang, W" uniqKey="Liang W">W. Liang</name></author><author><name sortKey="Sharov, V" uniqKey="Sharov V">V. Sharov</name></author><author><name sortKey="Howe, E A" uniqKey="Howe E">E. A. Howe</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Saito, T" uniqKey="Saito T">T. Saito</name></author><author><name sortKey="Bai, S" uniqKey="Bai S">S. Bai</name></author><author><name sortKey="Imai, T" uniqKey="Imai T">T. Imai</name></author><author><name sortKey="Ito, A" uniqKey="Ito A">A. Ito</name></author><author><name sortKey="Nakajima, I" uniqKey="Nakajima I">I. Nakajima</name></author><author><name sortKey="Moriguchi, T" uniqKey="Moriguchi T">T. Moriguchi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schmitz, R J" uniqKey="Schmitz R">R. J. Schmitz</name></author><author><name sortKey="Sung, S" uniqKey="Sung S">S. Sung</name></author><author><name sortKey="Amasino, R M" uniqKey="Amasino R">R. M. Amasino</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sheldon, C C" uniqKey="Sheldon C">C. C. Sheldon</name></author><author><name sortKey="Finnegan, E J" uniqKey="Finnegan E">E. J. Finnegan</name></author><author><name sortKey="Dennis, E S" uniqKey="Dennis E">E. S. Dennis</name></author><author><name sortKey="Peacock, W J" uniqKey="Peacock W">W. J. Peacock</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Springer, N M" uniqKey="Springer N">N. M. Springer</name></author><author><name sortKey="Napoli, C A" uniqKey="Napoli C">C. A. Napoli</name></author><author><name sortKey="Selinger, D A" uniqKey="Selinger D">D. A. Selinger</name></author><author><name sortKey="Pandey, R" uniqKey="Pandey R">R. Pandey</name></author><author><name sortKey="Cone, K C" uniqKey="Cone K">K. C. Cone</name></author><author><name sortKey="Chandler, V L" uniqKey="Chandler V">V. L. Chandler</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Strahl, B D" uniqKey="Strahl B">B. D. Strahl</name></author><author><name sortKey="Allis, C D" uniqKey="Allis C">C. D. Allis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sui, P F" uniqKey="Sui P">P. F. Sui</name></author><author><name sortKey="Jin, J" uniqKey="Jin J">J. Jin</name></author><author><name sortKey="Ye, S" uniqKey="Ye S">S. Ye</name></author><author><name sortKey="Mu, C" uniqKey="Mu C">C. Mu</name></author><author><name sortKey="Gao, J" uniqKey="Gao J">J. Gao</name></author><author><name sortKey="Feng, H Y" uniqKey="Feng H">H. Y. Feng</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sun, C" uniqKey="Sun C">C. Sun</name></author><author><name sortKey="Fang, J" uniqKey="Fang J">J. Fang</name></author><author><name sortKey="Zhao, T" uniqKey="Zhao T">T. Zhao</name></author><author><name sortKey="Xu, B" uniqKey="Xu B">B. Xu</name></author><author><name sortKey="Zhang, F" uniqKey="Zhang F">F. Zhang</name></author><author><name sortKey="Liu, L" uniqKey="Liu L">L. Liu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tanaka, M" uniqKey="Tanaka M">M. Tanaka</name></author><author><name sortKey="Kikuchi, A" uniqKey="Kikuchi A">A. Kikuchi</name></author><author><name sortKey="Kamada, H" uniqKey="Kamada H">H. Kamada</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tian, L" uniqKey="Tian L">L. Tian</name></author><author><name sortKey="Fong, M P" uniqKey="Fong M">M. P. Fong</name></author><author><name sortKey="Wang, J J" uniqKey="Wang J">J. J. Wang</name></author><author><name sortKey="Wei, N E" uniqKey="Wei N">N. E. Wei</name></author><author><name sortKey="Jiang, H" uniqKey="Jiang H">H. Jiang</name></author><author><name sortKey="Doerge, R W" uniqKey="Doerge R">R. W. Doerge</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Voorrips, R E" uniqKey="Voorrips R">R. E. Voorrips</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wang, Z" uniqKey="Wang Z">Z. Wang</name></author><author><name sortKey="Cao, H" uniqKey="Cao H">H. Cao</name></author><author><name sortKey="Chen, F" uniqKey="Chen F">F. Chen</name></author><author><name sortKey="Liu, Y" uniqKey="Liu Y">Y. Liu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wu, G A" uniqKey="Wu G">G. A. Wu</name></author><author><name sortKey="Prochnik, S" uniqKey="Prochnik S">S. Prochnik</name></author><author><name sortKey="Jenkins, J" uniqKey="Jenkins J">J. Jenkins</name></author><author><name sortKey="Salse, J" uniqKey="Salse J">J. Salse</name></author><author><name sortKey="Hellsten, U" uniqKey="Hellsten U">U. Hellsten</name></author><author><name sortKey="Murat, F" uniqKey="Murat F">F. Murat</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Xu, Q" uniqKey="Xu Q">Q. Xu</name></author><author><name sortKey="Chen, L L" uniqKey="Chen L">L. L. Chen</name></author><author><name sortKey="Ruan, X" uniqKey="Ruan X">X. Ruan</name></author><author><name sortKey="Chen, D" uniqKey="Chen D">D. Chen</name></author><author><name sortKey="Zhu, A" uniqKey="Zhu A">A. Zhu</name></author><author><name sortKey="Chen, C" uniqKey="Chen C">C. Chen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yang, H C" uniqKey="Yang H">H. C. Yang</name></author><author><name sortKey="Mo, H X" uniqKey="Mo H">H. X. Mo</name></author><author><name sortKey="Fan, D" uniqKey="Fan D">D. Fan</name></author><author><name sortKey="Cao, Y" uniqKey="Cao Y">Y. Cao</name></author><author><name sortKey="Cui, S J" uniqKey="Cui S">S. J. Cui</name></author><author><name sortKey="Ma, L G" uniqKey="Ma L">L. G. Ma</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhou, C H" uniqKey="Zhou C">C. H. Zhou</name></author><author><name sortKey="Zhang, L" uniqKey="Zhang L">L. Zhang</name></author><author><name sortKey="Duan, J" uniqKey="Duan J">J. Duan</name></author><author><name sortKey="Miki, B" uniqKey="Miki B">B. Miki</name></author><author><name sortKey="Wu, K Q" uniqKey="Wu K">K. Q. Wu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhu, Z" uniqKey="Zhu Z">Z. Zhu</name></author><author><name sortKey="An, F" uniqKey="An F">F. An</name></author><author><name sortKey="Feng, Y" uniqKey="Feng Y">Y. Feng</name></author><author><name sortKey="Li, P" uniqKey="Li P">P. Li</name></author><author><name sortKey="Xue, L" uniqKey="Xue L">L. Xue</name></author><author><name sortKey="Mu, A" uniqKey="Mu A">A. Mu</name></author></analytic></biblStruct></listBibl></div1></back></TEI><double pmid="26300904"><pmc><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genome-wide identification of sweet orange (<italic>Citrus sinensis</italic>) histone modification gene families and their expression analysis during the fruit development and fruit-blue mold infection process</title><author><name sortKey="Xu, Jidi" sort="Xu, Jidi" uniqKey="Xu J" first="Jidi" last="Xu">Jidi Xu</name></author><author><name sortKey="Xu, Haidan" sort="Xu, Haidan" uniqKey="Xu H" first="Haidan" last="Xu">Haidan Xu</name></author><author><name sortKey="Liu, Yuanlong" sort="Liu, Yuanlong" uniqKey="Liu Y" first="Yuanlong" last="Liu">Yuanlong Liu</name></author><author><name sortKey="Wang, Xia" sort="Wang, Xia" uniqKey="Wang X" first="Xia" last="Wang">Xia Wang</name></author><author><name sortKey="Xu, Qiang" sort="Xu, Qiang" uniqKey="Xu Q" first="Qiang" last="Xu">Qiang Xu</name></author><author><name sortKey="Deng, Xiuxin" sort="Deng, Xiuxin" uniqKey="Deng X" first="Xiuxin" last="Deng">Xiuxin Deng</name></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">26300904</idno><idno type="pmc">4525380</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4525380</idno><idno type="RBID">PMC:4525380</idno><idno type="doi">10.3389/fpls.2015.00607</idno><date when="2015">2015</date><idno type="wicri:Area/Pmc/Corpus">000077</idno><idno type="wicri:Area/Pmc/Curation">000077</idno><idno type="wicri:Area/Pmc/Checkpoint">000483</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Genome-wide identification of sweet orange (<italic>Citrus sinensis</italic>) histone modification gene families and their expression analysis during the fruit development and fruit-blue mold infection process</title><author><name sortKey="Xu, Jidi" sort="Xu, Jidi" uniqKey="Xu J" first="Jidi" last="Xu">Jidi Xu</name></author><author><name sortKey="Xu, Haidan" sort="Xu, Haidan" uniqKey="Xu H" first="Haidan" last="Xu">Haidan Xu</name></author><author><name sortKey="Liu, Yuanlong" sort="Liu, Yuanlong" uniqKey="Liu Y" first="Yuanlong" last="Liu">Yuanlong Liu</name></author><author><name sortKey="Wang, Xia" sort="Wang, Xia" uniqKey="Wang X" first="Xia" last="Wang">Xia Wang</name></author><author><name sortKey="Xu, Qiang" sort="Xu, Qiang" uniqKey="Xu Q" first="Qiang" last="Xu">Qiang Xu</name></author><author><name sortKey="Deng, Xiuxin" sort="Deng, Xiuxin" uniqKey="Deng X" first="Xiuxin" last="Deng">Xiuxin Deng</name></author></analytic><series><title level="j">Frontiers in Plant Science</title><idno type="eISSN">1664-462X</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>In eukaryotes, histone acetylation and methylation have been known to be involved in regulating diverse developmental processes and plant defense. These histone modification events are controlled by a series of histone modification gene families. To date, there is no study regarding genome-wide characterization of histone modification related genes in citrus species. Based on the two recent sequenced sweet orange genome databases, a total of 136 <italic>CsHMs</italic> (<italic>Citrus sinensis</italic> histone modification genes), including 47 <italic>CsHMTs</italic> (histone methyltransferase genes), 23 <italic>CsHDMs</italic> (histone demethylase genes), 50 <italic>CsHATs</italic> (histone acetyltransferase genes), and 16 <italic>CsHDACs</italic> (histone deacetylase genes) were identified. These genes were categorized to 11 gene families. A comprehensive analysis of these 11 gene families was performed with chromosome locations, phylogenetic comparison, gene structures, and conserved domain compositions of proteins. In order to gain an insight into the potential roles of these genes in citrus fruit development, 42 <italic>CsHMs</italic> with high mRNA abundance in fruit tissues were selected to further analyze their expression profiles at six stages of fruit development. Interestingly, a numbers of genes were expressed highly in flesh of ripening fruit and some of them showed the increasing expression levels along with the fruit development. Furthermore, we analyzed the expression patterns of all 136 <italic>CsHMs</italic> response to the infection of blue mold (<italic>Penicillium digitatum</italic>), which is the most devastating pathogen in citrus post-harvest process. The results indicated that 20 of them showed the strong alterations of their expression levels during the fruit-pathogen infection. In conclusion, this study presents a comprehensive analysis of the histone modification gene families in sweet orange and further elucidates their behaviors during the fruit development and the blue mold infection responses.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Ahmad, A" uniqKey="Ahmad A">A. Ahmad</name></author><author><name sortKey="Cao, X" uniqKey="Cao X">X. Cao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Aiese Cigliano, R" uniqKey="Aiese Cigliano R">R. Aiese Cigliano</name></author><author><name sortKey="Sanseverino, W" uniqKey="Sanseverino W">W. Sanseverino</name></author><author><name sortKey="Cremona, G" uniqKey="Cremona G">G. Cremona</name></author><author><name sortKey="Ercolano, M R" uniqKey="Ercolano M">M. R. Ercolano</name></author><author><name sortKey="Conicella, C" uniqKey="Conicella C">C. Conicella</name></author><author><name sortKey="Consiglio, F M" uniqKey="Consiglio F">F. M. Consiglio</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Alinsug, M V" uniqKey="Alinsug M">M. V. Alinsug</name></author><author><name sortKey="Yu, C W" uniqKey="Yu C">C. W. Yu</name></author><author><name sortKey="Wu, K" uniqKey="Wu K">K. Wu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Alvarez, M E" uniqKey="Alvarez M">M. E. Alvarez</name></author><author><name sortKey="Nota, F" uniqKey="Nota F">F. Nota</name></author><author><name sortKey="Cambiagno, D A" uniqKey="Cambiagno D">D. A. Cambiagno</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Alvarez Venegas, R" uniqKey="Alvarez Venegas R">R. Alvarez-Venegas</name></author><author><name sortKey="Al Abdallat, A" uniqKey="Al Abdallat A">A. Al Abdallat</name></author><author><name sortKey="Guo, M" uniqKey="Guo M">M. Guo</name></author><author><name sortKey="Alfano, J R" uniqKey="Alfano J">J. R. Alfano</name></author><author><name sortKey="Avramova, Z" uniqKey="Avramova Z">Z. Avramova</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Aquea, F" uniqKey="Aquea F">F. Aquea</name></author><author><name sortKey="Vega, A" uniqKey="Vega A">A. Vega</name></author><author><name sortKey="Timmermann, T" uniqKey="Timmermann T">T. Timmermann</name></author><author><name sortKey="Poupin, M J" uniqKey="Poupin M">M. J. Poupin</name></author><author><name sortKey="Arce Johnson, P" uniqKey="Arce Johnson P">P. Arce-Johnson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bain, J M" uniqKey="Bain J">J. M. Bain</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Berger, S L" uniqKey="Berger S">S. L. Berger</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Berr, A" uniqKey="Berr A">A. Berr</name></author><author><name sortKey="Mccallum, E J" uniqKey="Mccallum E">E. J. Mccallum</name></author><author><name sortKey="Alioua, A" uniqKey="Alioua A">A. Alioua</name></author><author><name sortKey="Heintz, D" uniqKey="Heintz D">D. Heintz</name></author><author><name sortKey="Heitz, T" uniqKey="Heitz T">T. Heitz</name></author><author><name sortKey="Shen, W H" uniqKey="Shen W">W. H. Shen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Berr, A" uniqKey="Berr A">A. Berr</name></author><author><name sortKey="Mccallum, E J" uniqKey="Mccallum E">E. J. Mccallum</name></author><author><name sortKey="Menard, R" uniqKey="Menard R">R. Menard</name></author><author><name sortKey="Meyer, D" uniqKey="Meyer D">D. Meyer</name></author><author><name sortKey="Fuchs, J" uniqKey="Fuchs J">J. Fuchs</name></author><author><name sortKey="Dong, A W" uniqKey="Dong A">A. W. Dong</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Berr, A" uniqKey="Berr A">A. Berr</name></author><author><name sortKey="Shafiq, S" uniqKey="Shafiq S">S. Shafiq</name></author><author><name sortKey="Shen, W H" uniqKey="Shen W">W. H. Shen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cazzonelli, C I" uniqKey="Cazzonelli C">C. I. Cazzonelli</name></author><author><name sortKey="Cuttriss, A J" uniqKey="Cuttriss A">A. J. Cuttriss</name></author><author><name sortKey="Cossetto, S B" uniqKey="Cossetto S">S. B. Cossetto</name></author><author><name sortKey="Pye, W" uniqKey="Pye W">W. Pye</name></author><author><name sortKey="Crisp, P" uniqKey="Crisp P">P. Crisp</name></author><author><name sortKey="Whelan, J" uniqKey="Whelan J">J. Whelan</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cazzonelli, C I" uniqKey="Cazzonelli C">C. I. Cazzonelli</name></author><author><name sortKey="Nisar, N" uniqKey="Nisar N">N. Nisar</name></author><author><name sortKey="Roberts, A C" uniqKey="Roberts A">A. C. Roberts</name></author><author><name sortKey="Murray, K D" uniqKey="Murray K">K. D. Murray</name></author><author><name sortKey="Borevitz, J O" uniqKey="Borevitz J">J. O. Borevitz</name></author><author><name sortKey="Pogson, B J" uniqKey="Pogson B">B. J. Pogson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, X" uniqKey="Chen X">X. Chen</name></author><author><name sortKey="Hu, Y" uniqKey="Hu Y">Y. Hu</name></author><author><name sortKey="Zhou, D X" uniqKey="Zhou D">D. X. Zhou</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, Z J" uniqKey="Chen Z">Z. J. Chen</name></author><author><name sortKey="Tian, L" uniqKey="Tian L">L. Tian</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Choi, S M" uniqKey="Choi S">S. M. Choi</name></author><author><name sortKey="Song, H R" uniqKey="Song H">H. R. Song</name></author><author><name sortKey="Han, S K" uniqKey="Han S">S. K. Han</name></author><author><name sortKey="Han, M" uniqKey="Han M">M. Han</name></author><author><name sortKey="Kim, C Y" uniqKey="Kim C">C. Y. Kim</name></author><author><name sortKey="Park, J" uniqKey="Park J">J. Park</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cigliano, R A" uniqKey="Cigliano R">R. A. Cigliano</name></author><author><name sortKey="Cremona, G" uniqKey="Cremona G">G. Cremona</name></author><author><name sortKey="Paparo, R" uniqKey="Paparo R">R. Paparo</name></author><author><name sortKey="Termolino, P" uniqKey="Termolino P">P. Termolino</name></author><author><name sortKey="Perrella, G" uniqKey="Perrella G">G. Perrella</name></author><author><name sortKey="Gutzat, R" uniqKey="Gutzat R">R. Gutzat</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Deal, R B" uniqKey="Deal R">R. B. Deal</name></author><author><name sortKey="Henikoff, S" uniqKey="Henikoff S">S. Henikoff</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dong, G F" uniqKey="Dong G">G. F. Dong</name></author><author><name sortKey="Ma, D P" uniqKey="Ma D">D. P. Ma</name></author><author><name sortKey="Li, J X" uniqKey="Li J">J. X. Li</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Feng, Q" uniqKey="Feng Q">Q. Feng</name></author><author><name sortKey="Wang, H B" uniqKey="Wang H">H. B. Wang</name></author><author><name sortKey="Ng, H H" uniqKey="Ng H">H. H. Ng</name></author><author><name sortKey="Erdjument Bromage, H" uniqKey="Erdjument Bromage H">H. Erdjument-Bromage</name></author><author><name sortKey="Tempst, P" uniqKey="Tempst P">P. Tempst</name></author><author><name sortKey="Struhl, K" uniqKey="Struhl K">K. Struhl</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gu, X F" uniqKey="Gu X">X. F. Gu</name></author><author><name sortKey="Xu, T D" uniqKey="Xu T">T. D. Xu</name></author><author><name sortKey="He, Y H" uniqKey="He Y">Y. H. He</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ho, L" uniqKey="Ho L">L. Ho</name></author><author><name sortKey="Crabtree, G R" uniqKey="Crabtree G">G. R. Crabtree</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hollender, C" uniqKey="Hollender C">C. Hollender</name></author><author><name sortKey="Liu, Z C" uniqKey="Liu Z">Z. C. Liu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jiang, D" uniqKey="Jiang D">D. Jiang</name></author><author><name sortKey="Yang, W" uniqKey="Yang W">W. Yang</name></author><author><name sortKey="He, Y" uniqKey="He Y">Y. He</name></author><author><name sortKey="Amasino, R M" uniqKey="Amasino R">R. M. Amasino</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kato, M" uniqKey="Kato M">M. Kato</name></author><author><name sortKey="Ikoma, Y" uniqKey="Ikoma Y">Y. Ikoma</name></author><author><name sortKey="Matsumoto, H" uniqKey="Matsumoto H">H. Matsumoto</name></author><author><name sortKey="Sugiura, M" uniqKey="Sugiura M">M. Sugiura</name></author><author><name sortKey="Hyodo, H" uniqKey="Hyodo H">H. Hyodo</name></author><author><name sortKey="Yano, M" uniqKey="Yano M">M. Yano</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kim, J M" uniqKey="Kim J">J. M. Kim</name></author><author><name sortKey="Sasaki, T" uniqKey="Sasaki T">T. Sasaki</name></author><author><name sortKey="Ueda, M" uniqKey="Ueda M">M. Ueda</name></author><author><name sortKey="Sako, K" uniqKey="Sako K">K. Sako</name></author><author><name sortKey="Seki, M" uniqKey="Seki M">M. Seki</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kim, J M" uniqKey="Kim J">J. M. Kim</name></author><author><name sortKey="To, T K" uniqKey="To T">T. K. To</name></author><author><name sortKey="Nishioka, T" uniqKey="Nishioka T">T. Nishioka</name></author><author><name sortKey="Seki, M" uniqKey="Seki M">M. Seki</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kim, S" uniqKey="Kim S">S. Kim</name></author><author><name sortKey="Lee, J" uniqKey="Lee J">J. Lee</name></author><author><name sortKey="Yang, J Y" uniqKey="Yang J">J. Y. Yang</name></author><author><name sortKey="Jung, C" uniqKey="Jung C">C. Jung</name></author><author><name sortKey="Chua, N H" uniqKey="Chua N">N. H. Chua</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kim, W" uniqKey="Kim W">W. Kim</name></author><author><name sortKey="Latrasse, D" uniqKey="Latrasse D">D. Latrasse</name></author><author><name sortKey="Servet, C" uniqKey="Servet C">C. Servet</name></author><author><name sortKey="Zhou, D X" uniqKey="Zhou D">D. X. Zhou</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Krogan, N T" uniqKey="Krogan N">N. T. Krogan</name></author><author><name sortKey="Hogan, K" uniqKey="Hogan K">K. Hogan</name></author><author><name sortKey="Long, J A" uniqKey="Long J">J. A. Long</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, C" uniqKey="Liu C">C. Liu</name></author><author><name sortKey="Lu, F" uniqKey="Lu F">F. Lu</name></author><author><name sortKey="Cui, X" uniqKey="Cui X">X. Cui</name></author><author><name sortKey="Cao, X" uniqKey="Cao X">X. Cao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, Q" uniqKey="Liu Q">Q. Liu</name></author><author><name sortKey="Xu, J" uniqKey="Xu J">J. Xu</name></author><author><name sortKey="Liu, Y" uniqKey="Liu Y">Y. Liu</name></author><author><name sortKey="Zhao, X" uniqKey="Zhao X">X. Zhao</name></author><author><name sortKey="Deng, X" uniqKey="Deng X">X. Deng</name></author><author><name sortKey="Guo, L" uniqKey="Guo L">L. Guo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Liu, Y" uniqKey="Liu Y">Y. Liu</name></author><author><name sortKey="Liu, Q" uniqKey="Liu Q">Q. Liu</name></author><author><name sortKey="Tao, N" uniqKey="Tao N">N. Tao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lu, F" uniqKey="Lu F">F. Lu</name></author><author><name sortKey="Cui, X" uniqKey="Cui X">X. Cui</name></author><author><name sortKey="Zhang, S" uniqKey="Zhang S">S. Zhang</name></author><author><name sortKey="Liu, C" uniqKey="Liu C">C. Liu</name></author><author><name sortKey="Cao, X" uniqKey="Cao X">X. Cao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lu, F" uniqKey="Lu F">F. Lu</name></author><author><name sortKey="Li, G" uniqKey="Li G">G. Li</name></author><author><name sortKey="Cui, X" uniqKey="Cui X">X. Cui</name></author><author><name sortKey="Liu, C" uniqKey="Liu C">C. Liu</name></author><author><name sortKey="Wang, X J" uniqKey="Wang X">X. J. Wang</name></author><author><name sortKey="Cao, X" uniqKey="Cao X">X. Cao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Luo, M" uniqKey="Luo M">M. Luo</name></author><author><name sortKey="Liu, X C" uniqKey="Liu X">X. C. Liu</name></author><author><name sortKey="Singh, P" uniqKey="Singh P">P. Singh</name></author><author><name sortKey="Cui, Y H" uniqKey="Cui Y">Y. H. Cui</name></author><author><name sortKey="Zimmerli, L" uniqKey="Zimmerli L">L. Zimmerli</name></author><author><name sortKey="Wu, K Q" uniqKey="Wu K">K. Q. Wu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ma, X" uniqKey="Ma X">X. Ma</name></author><author><name sortKey="Lv, S" uniqKey="Lv S">S. Lv</name></author><author><name sortKey="Zhang, C" uniqKey="Zhang C">C. Zhang</name></author><author><name sortKey="Yang, C" uniqKey="Yang C">C. Yang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Macarisin, D" uniqKey="Macarisin D">D. Macarisin</name></author><author><name sortKey="Cohen, L" uniqKey="Cohen L">L. Cohen</name></author><author><name sortKey="Eick, A" uniqKey="Eick A">A. Eick</name></author><author><name sortKey="Rafael, G" uniqKey="Rafael G">G. Rafael</name></author><author><name sortKey="Belausov, E" uniqKey="Belausov E">E. Belausov</name></author><author><name sortKey="Wisniewski, M" uniqKey="Wisniewski M">M. Wisniewski</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ning, Y Q" uniqKey="Ning Y">Y.-Q. Ning</name></author><author><name sortKey="Ma, Z Y" uniqKey="Ma Z">Z.-Y. Ma</name></author><author><name sortKey="Huang, H W" uniqKey="Huang H">H.-W. Huang</name></author><author><name sortKey="Mo, H" uniqKey="Mo H">H. Mo</name></author><author><name sortKey="Zhao, T T" uniqKey="Zhao T">T.-T. Zhao</name></author><author><name sortKey="Li, L" uniqKey="Li L">L. Li</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Niu, L" uniqKey="Niu L">L. Niu</name></author><author><name sortKey="Zhang, Y" uniqKey="Zhang Y">Y. Zhang</name></author><author><name sortKey="Pei, Y" uniqKey="Pei Y">Y. Pei</name></author><author><name sortKey="Liu, C" uniqKey="Liu C">C. Liu</name></author><author><name sortKey="Cao, X" uniqKey="Cao X">X. Cao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pahlich, S" uniqKey="Pahlich S">S. Pahlich</name></author><author><name sortKey="Zakaryan, R P" uniqKey="Zakaryan R">R. P. Zakaryan</name></author><author><name sortKey="Gehring, H" uniqKey="Gehring H">H. Gehring</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pandey, R" uniqKey="Pandey R">R. Pandey</name></author><author><name sortKey="Muller, A" uniqKey="Muller A">A. Muller</name></author><author><name sortKey="Napoli, C A" uniqKey="Napoli C">C. A. Napoli</name></author><author><name sortKey="Selinger, D A" uniqKey="Selinger D">D. A. Selinger</name></author><author><name sortKey="Pikaard, C S" uniqKey="Pikaard C">C. S. Pikaard</name></author><author><name sortKey="Richards, E J" uniqKey="Richards E">E. J. Richards</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Patel, D J" uniqKey="Patel D">D. J. Patel</name></author><author><name sortKey="Wang, Z" uniqKey="Wang Z">Z. Wang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pei, Y" uniqKey="Pei Y">Y. Pei</name></author><author><name sortKey="Niu, L" uniqKey="Niu L">L. Niu</name></author><author><name sortKey="Lu, F" uniqKey="Lu F">F. Lu</name></author><author><name sortKey="Liu, C" uniqKey="Liu C">C. Liu</name></author><author><name sortKey="Zhai, J" uniqKey="Zhai J">J. Zhai</name></author><author><name sortKey="Kong, X" uniqKey="Kong X">X. Kong</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rouseff, R" uniqKey="Rouseff R">R. Rouseff</name></author><author><name sortKey="Raley, L" uniqKey="Raley L">L. Raley</name></author><author><name sortKey="Hofsommer, H J" uniqKey="Hofsommer H">H.-J. Hofsommer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Saeed, A I" uniqKey="Saeed A">A. I. Saeed</name></author><author><name sortKey="Hagabati, N K" uniqKey="Hagabati N">N. K. Hagabati</name></author><author><name sortKey="Braisted, J C" uniqKey="Braisted J">J. C. Braisted</name></author><author><name sortKey="Liang, W" uniqKey="Liang W">W. Liang</name></author><author><name sortKey="Sharov, V" uniqKey="Sharov V">V. Sharov</name></author><author><name sortKey="Howe, E A" uniqKey="Howe E">E. A. Howe</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Saito, T" uniqKey="Saito T">T. Saito</name></author><author><name sortKey="Bai, S" uniqKey="Bai S">S. Bai</name></author><author><name sortKey="Imai, T" uniqKey="Imai T">T. Imai</name></author><author><name sortKey="Ito, A" uniqKey="Ito A">A. Ito</name></author><author><name sortKey="Nakajima, I" uniqKey="Nakajima I">I. Nakajima</name></author><author><name sortKey="Moriguchi, T" uniqKey="Moriguchi T">T. Moriguchi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Schmitz, R J" uniqKey="Schmitz R">R. J. Schmitz</name></author><author><name sortKey="Sung, S" uniqKey="Sung S">S. Sung</name></author><author><name sortKey="Amasino, R M" uniqKey="Amasino R">R. M. Amasino</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sheldon, C C" uniqKey="Sheldon C">C. C. Sheldon</name></author><author><name sortKey="Finnegan, E J" uniqKey="Finnegan E">E. J. Finnegan</name></author><author><name sortKey="Dennis, E S" uniqKey="Dennis E">E. S. Dennis</name></author><author><name sortKey="Peacock, W J" uniqKey="Peacock W">W. J. Peacock</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Springer, N M" uniqKey="Springer N">N. M. Springer</name></author><author><name sortKey="Napoli, C A" uniqKey="Napoli C">C. A. Napoli</name></author><author><name sortKey="Selinger, D A" uniqKey="Selinger D">D. A. Selinger</name></author><author><name sortKey="Pandey, R" uniqKey="Pandey R">R. Pandey</name></author><author><name sortKey="Cone, K C" uniqKey="Cone K">K. C. Cone</name></author><author><name sortKey="Chandler, V L" uniqKey="Chandler V">V. L. Chandler</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Strahl, B D" uniqKey="Strahl B">B. D. Strahl</name></author><author><name sortKey="Allis, C D" uniqKey="Allis C">C. D. Allis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sui, P F" uniqKey="Sui P">P. F. Sui</name></author><author><name sortKey="Jin, J" uniqKey="Jin J">J. Jin</name></author><author><name sortKey="Ye, S" uniqKey="Ye S">S. Ye</name></author><author><name sortKey="Mu, C" uniqKey="Mu C">C. Mu</name></author><author><name sortKey="Gao, J" uniqKey="Gao J">J. Gao</name></author><author><name sortKey="Feng, H Y" uniqKey="Feng H">H. Y. Feng</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sun, C" uniqKey="Sun C">C. Sun</name></author><author><name sortKey="Fang, J" uniqKey="Fang J">J. Fang</name></author><author><name sortKey="Zhao, T" uniqKey="Zhao T">T. Zhao</name></author><author><name sortKey="Xu, B" uniqKey="Xu B">B. Xu</name></author><author><name sortKey="Zhang, F" uniqKey="Zhang F">F. Zhang</name></author><author><name sortKey="Liu, L" uniqKey="Liu L">L. Liu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tanaka, M" uniqKey="Tanaka M">M. Tanaka</name></author><author><name sortKey="Kikuchi, A" uniqKey="Kikuchi A">A. Kikuchi</name></author><author><name sortKey="Kamada, H" uniqKey="Kamada H">H. Kamada</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tian, L" uniqKey="Tian L">L. Tian</name></author><author><name sortKey="Fong, M P" uniqKey="Fong M">M. P. Fong</name></author><author><name sortKey="Wang, J J" uniqKey="Wang J">J. J. Wang</name></author><author><name sortKey="Wei, N E" uniqKey="Wei N">N. E. Wei</name></author><author><name sortKey="Jiang, H" uniqKey="Jiang H">H. Jiang</name></author><author><name sortKey="Doerge, R W" uniqKey="Doerge R">R. W. Doerge</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Voorrips, R E" uniqKey="Voorrips R">R. E. Voorrips</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wang, Z" uniqKey="Wang Z">Z. Wang</name></author><author><name sortKey="Cao, H" uniqKey="Cao H">H. Cao</name></author><author><name sortKey="Chen, F" uniqKey="Chen F">F. Chen</name></author><author><name sortKey="Liu, Y" uniqKey="Liu Y">Y. Liu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wu, G A" uniqKey="Wu G">G. A. Wu</name></author><author><name sortKey="Prochnik, S" uniqKey="Prochnik S">S. Prochnik</name></author><author><name sortKey="Jenkins, J" uniqKey="Jenkins J">J. Jenkins</name></author><author><name sortKey="Salse, J" uniqKey="Salse J">J. Salse</name></author><author><name sortKey="Hellsten, U" uniqKey="Hellsten U">U. Hellsten</name></author><author><name sortKey="Murat, F" uniqKey="Murat F">F. Murat</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Xu, Q" uniqKey="Xu Q">Q. Xu</name></author><author><name sortKey="Chen, L L" uniqKey="Chen L">L. L. Chen</name></author><author><name sortKey="Ruan, X" uniqKey="Ruan X">X. Ruan</name></author><author><name sortKey="Chen, D" uniqKey="Chen D">D. Chen</name></author><author><name sortKey="Zhu, A" uniqKey="Zhu A">A. Zhu</name></author><author><name sortKey="Chen, C" uniqKey="Chen C">C. Chen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yang, H C" uniqKey="Yang H">H. C. Yang</name></author><author><name sortKey="Mo, H X" uniqKey="Mo H">H. X. Mo</name></author><author><name sortKey="Fan, D" uniqKey="Fan D">D. Fan</name></author><author><name sortKey="Cao, Y" uniqKey="Cao Y">Y. Cao</name></author><author><name sortKey="Cui, S J" uniqKey="Cui S">S. J. Cui</name></author><author><name sortKey="Ma, L G" uniqKey="Ma L">L. G. Ma</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhou, C H" uniqKey="Zhou C">C. H. Zhou</name></author><author><name sortKey="Zhang, L" uniqKey="Zhang L">L. Zhang</name></author><author><name sortKey="Duan, J" uniqKey="Duan J">J. Duan</name></author><author><name sortKey="Miki, B" uniqKey="Miki B">B. Miki</name></author><author><name sortKey="Wu, K Q" uniqKey="Wu K">K. Q. Wu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhu, Z" uniqKey="Zhu Z">Z. Zhu</name></author><author><name sortKey="An, F" uniqKey="An F">F. An</name></author><author><name sortKey="Feng, Y" uniqKey="Feng Y">Y. Feng</name></author><author><name sortKey="Li, P" uniqKey="Li P">P. Li</name></author><author><name sortKey="Xue, L" uniqKey="Xue L">L. Xue</name></author><author><name sortKey="Mu, A" uniqKey="Mu A">A. Mu</name></author></analytic></biblStruct></listBibl></div1></back></TEI></pmc><pubmed><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Genome-wide identification of sweet orange (Citrus sinensis) histone modification gene families and their expression analysis during the fruit development and fruit-blue mold infection process.</title><author><name sortKey="Xu, Jidi" sort="Xu, Jidi" uniqKey="Xu J" first="Jidi" last="Xu">Jidi Xu</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan</wicri:regionArea><wicri:noRegion>Huazhong Agricultural University Wuhan</wicri:noRegion></affiliation></author><author><name sortKey="Xu, Haidan" sort="Xu, Haidan" uniqKey="Xu H" first="Haidan" last="Xu">Haidan Xu</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan</wicri:regionArea><wicri:noRegion>Huazhong Agricultural University Wuhan</wicri:noRegion></affiliation></author><author><name sortKey="Liu, Yuanlong" sort="Liu, Yuanlong" uniqKey="Liu Y" first="Yuanlong" last="Liu">Yuanlong Liu</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan</wicri:regionArea><wicri:noRegion>Huazhong Agricultural University Wuhan</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Xia" sort="Wang, Xia" uniqKey="Wang X" first="Xia" last="Wang">Xia Wang</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan</wicri:regionArea><wicri:noRegion>Huazhong Agricultural University Wuhan</wicri:noRegion></affiliation></author><author><name sortKey="Xu, Qiang" sort="Xu, Qiang" uniqKey="Xu Q" first="Qiang" last="Xu">Qiang Xu</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan</wicri:regionArea><wicri:noRegion>Huazhong Agricultural University Wuhan</wicri:noRegion></affiliation></author><author><name sortKey="Deng, Xiuxin" sort="Deng, Xiuxin" uniqKey="Deng X" first="Xiuxin" last="Deng">Xiuxin Deng</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan</wicri:regionArea><wicri:noRegion>Huazhong Agricultural University Wuhan</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2015">2015</date><idno type="RBID">pubmed:26300904</idno><idno type="pmid">26300904</idno><idno type="doi">10.3389/fpls.2015.00607</idno><idno type="wicri:Area/PubMed/Corpus">000144</idno><idno type="wicri:Area/PubMed/Curation">000144</idno><idno type="wicri:Area/PubMed/Checkpoint">000144</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Genome-wide identification of sweet orange (Citrus sinensis) histone modification gene families and their expression analysis during the fruit development and fruit-blue mold infection process.</title><author><name sortKey="Xu, Jidi" sort="Xu, Jidi" uniqKey="Xu J" first="Jidi" last="Xu">Jidi Xu</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan</wicri:regionArea><wicri:noRegion>Huazhong Agricultural University Wuhan</wicri:noRegion></affiliation></author><author><name sortKey="Xu, Haidan" sort="Xu, Haidan" uniqKey="Xu H" first="Haidan" last="Xu">Haidan Xu</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan</wicri:regionArea><wicri:noRegion>Huazhong Agricultural University Wuhan</wicri:noRegion></affiliation></author><author><name sortKey="Liu, Yuanlong" sort="Liu, Yuanlong" uniqKey="Liu Y" first="Yuanlong" last="Liu">Yuanlong Liu</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan</wicri:regionArea><wicri:noRegion>Huazhong Agricultural University Wuhan</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Xia" sort="Wang, Xia" uniqKey="Wang X" first="Xia" last="Wang">Xia Wang</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan</wicri:regionArea><wicri:noRegion>Huazhong Agricultural University Wuhan</wicri:noRegion></affiliation></author><author><name sortKey="Xu, Qiang" sort="Xu, Qiang" uniqKey="Xu Q" first="Qiang" last="Xu">Qiang Xu</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan</wicri:regionArea><wicri:noRegion>Huazhong Agricultural University Wuhan</wicri:noRegion></affiliation></author><author><name sortKey="Deng, Xiuxin" sort="Deng, Xiuxin" uniqKey="Deng X" first="Xiuxin" last="Deng">Xiuxin Deng</name><affiliation wicri:level="1"><nlm:affiliation>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University Wuhan</wicri:regionArea><wicri:noRegion>Huazhong Agricultural University Wuhan</wicri:noRegion></affiliation></author></analytic><series><title level="j">Frontiers in plant science</title><imprint><date when="2015" type="published">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">In eukaryotes, histone acetylation and methylation have been known to be involved in regulating diverse developmental processes and plant defense. These histone modification events are controlled by a series of histone modification gene families. To date, there is no study regarding genome-wide characterization of histone modification related genes in citrus species. Based on the two recent sequenced sweet orange genome databases, a total of 136 CsHMs (Citrus sinensis histone modification genes), including 47 CsHMTs (histone methyltransferase genes), 23 CsHDMs (histone demethylase genes), 50 CsHATs (histone acetyltransferase genes), and 16 CsHDACs (histone deacetylase genes) were identified. These genes were categorized to 11 gene families. A comprehensive analysis of these 11 gene families was performed with chromosome locations, phylogenetic comparison, gene structures, and conserved domain compositions of proteins. In order to gain an insight into the potential roles of these genes in citrus fruit development, 42 CsHMs with high mRNA abundance in fruit tissues were selected to further analyze their expression profiles at six stages of fruit development. Interestingly, a numbers of genes were expressed highly in flesh of ripening fruit and some of them showed the increasing expression levels along with the fruit development. Furthermore, we analyzed the expression patterns of all 136 CsHMs response to the infection of blue mold (Penicillium digitatum), which is the most devastating pathogen in citrus post-harvest process. The results indicated that 20 of them showed the strong alterations of their expression levels during the fruit-pathogen infection. In conclusion, this study presents a comprehensive analysis of the histone modification gene families in sweet orange and further elucidates their behaviors during the fruit development and the blue mold infection responses.</div></front></TEI></pubmed></double></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/OrangerV1/Data/Ncbi/Merge
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001C78 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Ncbi/Merge/biblio.hfd -nk 001C78 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Wicri/Bois
|area= OrangerV1
|flux= Ncbi
|étape= Merge
|type= RBID
|clé= PMC:4525380
|texte= Genome-wide identification of sweet orange (Citrus sinensis) histone modification gene families and their expression analysis during the fruit development and fruit-blue mold infection process
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Ncbi/Merge/RBID.i -Sk "pubmed:26300904" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Ncbi/Merge/biblio.hfd \
| NlmPubMed2Wicri -a OrangerV1
| This area was generated with Dilib version V0.6.25. |  |