Serveur d'exploration sur la Covid et les espaces publics

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

The Identification of First COVID-19 Cluster in Indonesia.

Identifieur interne : 000054 ( Main/Exploration ); précédent : 000053; suivant : 000055

The Identification of First COVID-19 Cluster in Indonesia.

Auteurs : Vivi Setiawaty [Indonésie] ; Herman Kosasih [Indonésie] ; Yan Mardian [Indonésie] ; Emita Ajis [Indonésie] ; Endang Burni Prasetyowati [Indonésie] ; Siswanto [Indonésie] ; Muhammad Karyana [Indonésie] ; Sars-CoV-Reference Laboratory Ministry Of Health Indonesia

Source :

RBID : pubmed:33069265

Abstract

We describe the first 11 detected COVID-19 cases in Indonesia, resulting from a local transmission occurring in a club and a restaurant. The virus was detected until an average of 21.3 days (range: 11-25, SD: 4.1) after the onset of illness, and the partial N gene sequences (28,321-28,707 nucleotide position) had 100% similarity with the SARS-CoV-2 sequence from Wuhan. Two subjects were asymptomatic, and one subject has died.

DOI: 10.4269/ajtmh.20-0554
PubMed: 33069265
PubMed Central: PMC7695062


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">The Identification of First COVID-19 Cluster in Indonesia.</title>
<author>
<name sortKey="Setiawaty, Vivi" sort="Setiawaty, Vivi" uniqKey="Setiawaty V" first="Vivi" last="Setiawaty">Vivi Setiawaty</name>
<affiliation wicri:level="1">
<nlm:affiliation>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Kosasih, Herman" sort="Kosasih, Herman" uniqKey="Kosasih H" first="Herman" last="Kosasih">Herman Kosasih</name>
<affiliation wicri:level="1">
<nlm:affiliation>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Mardian, Yan" sort="Mardian, Yan" uniqKey="Mardian Y" first="Yan" last="Mardian">Yan Mardian</name>
<affiliation wicri:level="1">
<nlm:affiliation>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Ajis, Emita" sort="Ajis, Emita" uniqKey="Ajis E" first="Emita" last="Ajis">Emita Ajis</name>
<affiliation wicri:level="1">
<nlm:affiliation>Directorate of Surveillance and Health Quarantine, Ministry of Health, Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>Directorate of Surveillance and Health Quarantine, Ministry of Health, Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Prasetyowati, Endang Burni" sort="Prasetyowati, Endang Burni" uniqKey="Prasetyowati E" first="Endang Burni" last="Prasetyowati">Endang Burni Prasetyowati</name>
<affiliation wicri:level="1">
<nlm:affiliation>Directorate of Surveillance and Health Quarantine, Ministry of Health, Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>Directorate of Surveillance and Health Quarantine, Ministry of Health, Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Siswanto" sort="Siswanto" uniqKey="Siswanto" last="Siswanto">Siswanto</name>
<affiliation wicri:level="1">
<nlm:affiliation>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Karyana, Muhammad" sort="Karyana, Muhammad" uniqKey="Karyana M" first="Muhammad" last="Karyana">Muhammad Karyana</name>
<affiliation wicri:level="1">
<nlm:affiliation>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1">
<nlm:affiliation>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Sars Cov Reference Laboratory Ministry Of Health Indonesia" sort="Sars Cov Reference Laboratory Ministry Of Health Indonesia" uniqKey="Sars Cov Reference Laboratory Ministry Of Health Indonesia" last="Sars-Cov-Reference Laboratory Ministry Of Health Indonesia">Sars-CoV-Reference Laboratory Ministry Of Health Indonesia</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2020">2020</date>
<idno type="RBID">pubmed:33069265</idno>
<idno type="pmid">33069265</idno>
<idno type="doi">10.4269/ajtmh.20-0554</idno>
<idno type="pmc">PMC7695062</idno>
<idno type="wicri:Area/Main/Corpus">000070</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000070</idno>
<idno type="wicri:Area/Main/Curation">000070</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000070</idno>
<idno type="wicri:Area/Main/Exploration">000070</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">The Identification of First COVID-19 Cluster in Indonesia.</title>
<author>
<name sortKey="Setiawaty, Vivi" sort="Setiawaty, Vivi" uniqKey="Setiawaty V" first="Vivi" last="Setiawaty">Vivi Setiawaty</name>
<affiliation wicri:level="1">
<nlm:affiliation>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Kosasih, Herman" sort="Kosasih, Herman" uniqKey="Kosasih H" first="Herman" last="Kosasih">Herman Kosasih</name>
<affiliation wicri:level="1">
<nlm:affiliation>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Mardian, Yan" sort="Mardian, Yan" uniqKey="Mardian Y" first="Yan" last="Mardian">Yan Mardian</name>
<affiliation wicri:level="1">
<nlm:affiliation>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Ajis, Emita" sort="Ajis, Emita" uniqKey="Ajis E" first="Emita" last="Ajis">Emita Ajis</name>
<affiliation wicri:level="1">
<nlm:affiliation>Directorate of Surveillance and Health Quarantine, Ministry of Health, Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>Directorate of Surveillance and Health Quarantine, Ministry of Health, Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Prasetyowati, Endang Burni" sort="Prasetyowati, Endang Burni" uniqKey="Prasetyowati E" first="Endang Burni" last="Prasetyowati">Endang Burni Prasetyowati</name>
<affiliation wicri:level="1">
<nlm:affiliation>Directorate of Surveillance and Health Quarantine, Ministry of Health, Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>Directorate of Surveillance and Health Quarantine, Ministry of Health, Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Siswanto" sort="Siswanto" uniqKey="Siswanto" last="Siswanto">Siswanto</name>
<affiliation wicri:level="1">
<nlm:affiliation>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Karyana, Muhammad" sort="Karyana, Muhammad" uniqKey="Karyana M" first="Muhammad" last="Karyana">Muhammad Karyana</name>
<affiliation wicri:level="1">
<nlm:affiliation>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1">
<nlm:affiliation>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta, Indonesia.</nlm:affiliation>
<country xml:lang="fr">Indonésie</country>
<wicri:regionArea>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta</wicri:regionArea>
<wicri:noRegion>Jakarta</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Sars Cov Reference Laboratory Ministry Of Health Indonesia" sort="Sars Cov Reference Laboratory Ministry Of Health Indonesia" uniqKey="Sars Cov Reference Laboratory Ministry Of Health Indonesia" last="Sars-Cov-Reference Laboratory Ministry Of Health Indonesia">Sars-CoV-Reference Laboratory Ministry Of Health Indonesia</name>
</author>
</analytic>
<series>
<title level="j">The American journal of tropical medicine and hygiene</title>
<idno type="eISSN">1476-1645</idno>
<imprint>
<date when="2020" type="published">2020</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">We describe the first 11 detected COVID-19 cases in Indonesia, resulting from a local transmission occurring in a club and a restaurant. The virus was detected until an average of 21.3 days (range: 11-25, SD: 4.1) after the onset of illness, and the partial
<i>N</i>
gene sequences (28,321-28,707 nucleotide position) had 100% similarity with the SARS-CoV-2 sequence from Wuhan. Two subjects were asymptomatic, and one subject has died.</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="In-Process" Owner="NLM">
<PMID Version="1">33069265</PMID>
<DateRevised>
<Year>2020</Year>
<Month>12</Month>
<Day>10</Day>
</DateRevised>
<Article PubModel="Print-Electronic">
<Journal>
<ISSN IssnType="Electronic">1476-1645</ISSN>
<JournalIssue CitedMedium="Internet">
<Volume>103</Volume>
<Issue>6</Issue>
<PubDate>
<Year>2020</Year>
<Month>Dec</Month>
</PubDate>
</JournalIssue>
<Title>The American journal of tropical medicine and hygiene</Title>
<ISOAbbreviation>Am J Trop Med Hyg</ISOAbbreviation>
</Journal>
<ArticleTitle>The Identification of First COVID-19 Cluster in Indonesia.</ArticleTitle>
<Pagination>
<MedlinePgn>2339-2342</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.4269/ajtmh.20-0554</ELocationID>
<Abstract>
<AbstractText>We describe the first 11 detected COVID-19 cases in Indonesia, resulting from a local transmission occurring in a club and a restaurant. The virus was detected until an average of 21.3 days (range: 11-25, SD: 4.1) after the onset of illness, and the partial
<i>N</i>
gene sequences (28,321-28,707 nucleotide position) had 100% similarity with the SARS-CoV-2 sequence from Wuhan. Two subjects were asymptomatic, and one subject has died.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Setiawaty</LastName>
<ForeName>Vivi</ForeName>
<Initials>V</Initials>
<AffiliationInfo>
<Affiliation>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta, Indonesia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Kosasih</LastName>
<ForeName>Herman</ForeName>
<Initials>H</Initials>
<AffiliationInfo>
<Affiliation>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta, Indonesia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Mardian</LastName>
<ForeName>Yan</ForeName>
<Initials>Y</Initials>
<AffiliationInfo>
<Affiliation>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta, Indonesia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Ajis</LastName>
<ForeName>Emita</ForeName>
<Initials>E</Initials>
<AffiliationInfo>
<Affiliation>Directorate of Surveillance and Health Quarantine, Ministry of Health, Jakarta, Indonesia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Prasetyowati</LastName>
<ForeName>Endang Burni</ForeName>
<Initials>EB</Initials>
<AffiliationInfo>
<Affiliation>Directorate of Surveillance and Health Quarantine, Ministry of Health, Jakarta, Indonesia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Siswanto</LastName>
<AffiliationInfo>
<Affiliation>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta, Indonesia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Karyana</LastName>
<ForeName>Muhammad</ForeName>
<Initials>M</Initials>
<AffiliationInfo>
<Affiliation>Indonesia Research Partnership on Infectious Disease (INA-RESPOND), Jakarta, Indonesia.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>National Institute of Health Research and Development (NIHRD), Ministry of Health, Jakarta, Indonesia.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Sars-CoV-Reference Laboratory Ministry Of Health Indonesia</LastName>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2020</Year>
<Month>10</Month>
<Day>12</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo>
<Country>United States</Country>
<MedlineTA>Am J Trop Med Hyg</MedlineTA>
<NlmUniqueID>0370507</NlmUniqueID>
<ISSNLinking>0002-9637</ISSNLinking>
</MedlineJournalInfo>
<CitationSubset>AIM</CitationSubset>
<CitationSubset>IM</CitationSubset>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="pubmed">
<Year>2020</Year>
<Month>10</Month>
<Day>19</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2020</Year>
<Month>10</Month>
<Day>19</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez">
<Year>2020</Year>
<Month>10</Month>
<Day>18</Day>
<Hour>20</Hour>
<Minute>19</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">33069265</ArticleId>
<ArticleId IdType="doi">10.4269/ajtmh.20-0554</ArticleId>
<ArticleId IdType="pmc">PMC7695062</ArticleId>
</ArticleIdList>
<ReferenceList>
<Reference>
<Citation>Science. 2013 Mar 15;339(6125):1287-8</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">23493705</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Viruses. 2018 Feb 24;10(2):</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">29495250</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>N Engl J Med. 2006 Nov 23;355(21):2186-94</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">17124016</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Emerg Infect Dis. 2020 Aug;26(8):</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">32396505</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Emerg Infect Dis. 2020 Aug;26(8):1917-1920</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">32412896</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Clin Infect Dis. 2020 Dec 3;71(9):2311-2313</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">32628269</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>N Engl J Med. 2020 Feb 20;382(8):727-733</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">31978945</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
<affiliations>
<list>
<country>
<li>Indonésie</li>
</country>
</list>
<tree>
<noCountry>
<name sortKey="Sars Cov Reference Laboratory Ministry Of Health Indonesia" sort="Sars Cov Reference Laboratory Ministry Of Health Indonesia" uniqKey="Sars Cov Reference Laboratory Ministry Of Health Indonesia" last="Sars-Cov-Reference Laboratory Ministry Of Health Indonesia">Sars-CoV-Reference Laboratory Ministry Of Health Indonesia</name>
</noCountry>
<country name="Indonésie">
<noRegion>
<name sortKey="Setiawaty, Vivi" sort="Setiawaty, Vivi" uniqKey="Setiawaty V" first="Vivi" last="Setiawaty">Vivi Setiawaty</name>
</noRegion>
<name sortKey="Ajis, Emita" sort="Ajis, Emita" uniqKey="Ajis E" first="Emita" last="Ajis">Emita Ajis</name>
<name sortKey="Karyana, Muhammad" sort="Karyana, Muhammad" uniqKey="Karyana M" first="Muhammad" last="Karyana">Muhammad Karyana</name>
<name sortKey="Karyana, Muhammad" sort="Karyana, Muhammad" uniqKey="Karyana M" first="Muhammad" last="Karyana">Muhammad Karyana</name>
<name sortKey="Kosasih, Herman" sort="Kosasih, Herman" uniqKey="Kosasih H" first="Herman" last="Kosasih">Herman Kosasih</name>
<name sortKey="Mardian, Yan" sort="Mardian, Yan" uniqKey="Mardian Y" first="Yan" last="Mardian">Yan Mardian</name>
<name sortKey="Prasetyowati, Endang Burni" sort="Prasetyowati, Endang Burni" uniqKey="Prasetyowati E" first="Endang Burni" last="Prasetyowati">Endang Burni Prasetyowati</name>
<name sortKey="Siswanto" sort="Siswanto" uniqKey="Siswanto" last="Siswanto">Siswanto</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Wicri/explor/CovidPublicV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000054 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000054 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Wicri
   |area=    CovidPublicV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:33069265
   |texte=   The Identification of First COVID-19 Cluster in Indonesia.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:33069265" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a CovidPublicV1 

Wicri

This area was generated with Dilib version V0.6.38.
Data generation: Tue Dec 15 17:23:28 2020. Site generation: Wed Jan 27 15:07:40 2021