An emerging cyberinfrastructure for biodefense pathogen and pathogen-host data.
Identifieur interne : 000079 ( PubMed/Corpus ); précédent : 000078; suivant : 000080An emerging cyberinfrastructure for biodefense pathogen and pathogen-host data.
Auteurs : C. Zhang ; O. Crasta ; S. Cammer ; R. Will ; R. Kenyon ; D. Sullivan ; Q. Yu ; W. Sun ; R. Jha ; D. Liu ; T. Xue ; Y. Zhang ; M. Moore ; P. Mcgarvey ; H. Huang ; Y. Chen ; J. Zhang ; R. Mazumder ; C. Wu ; B. SobralSource :
- Nucleic acids research [ 1362-4962 ] ; 2008.
English descriptors
- KwdEn :
- Animals, Bacterial Proteins (chemistry), Bacterial Proteins (genetics), Bacterial Proteins (metabolism), Bioterrorism, Computer Graphics, Databases, Protein, Gene Expression Profiling, Host-Pathogen Interactions, Humans, Infection (diagnosis), Infection (therapy), Internet, Mice, Proteomics, Protozoan Proteins (chemistry), Protozoan Proteins (genetics), Protozoan Proteins (metabolism), Software, User-Computer Interface, Viral Proteins (chemistry), Viral Proteins (genetics), Viral Proteins (metabolism).
- MESH :
- chemical , chemistry : Bacterial Proteins, Protozoan Proteins, Viral Proteins.
- chemical , genetics : Bacterial Proteins, Protozoan Proteins, Viral Proteins.
- chemical , metabolism : Bacterial Proteins, Protozoan Proteins, Viral Proteins.
- diagnosis : Infection.
- therapy : Infection.
- Animals, Bioterrorism, Computer Graphics, Databases, Protein, Gene Expression Profiling, Host-Pathogen Interactions, Humans, Internet, Mice, Proteomics, Software, User-Computer Interface.
Abstract
The NIAID-funded Biodefense Proteomics Resource Center (RC) provides storage, dissemination, visualization and analysis capabilities for the experimental data deposited by seven Proteomics Research Centers (PRCs). The data and its publication is to support researchers working to discover candidates for the next generation of vaccines, therapeutics and diagnostics against NIAID's Category A, B and C priority pathogens. The data includes transcriptional profiles, protein profiles, protein structural data and host-pathogen protein interactions, in the context of the pathogen life cycle in vivo and in vitro. The database has stored and supported host or pathogen data derived from Bacillus, Brucella, Cryptosporidium, Salmonella, SARS, Toxoplasma, Vibrio and Yersinia, human tissue libraries, and mouse macrophages. These publicly available data cover diverse data types such as mass spectrometry, yeast two-hybrid (Y2H), gene expression profiles, X-ray and NMR determined protein structures and protein expression clones. The growing database covers over 23 000 unique genes/proteins from different experiments and organisms. All of the genes/proteins are annotated and integrated across experiments using UniProt Knowledgebase (UniProtKB) accession numbers. The web-interface for the database enables searching, querying and downloading at the level of experiment, group and individual gene(s)/protein(s) via UniProtKB accession numbers or protein function keywords. The system is accessible at http://www.proteomicsresource.org/.
DOI: 10.1093/nar/gkm903
PubMed: 17984082
Links to Exploration step
pubmed:17984082Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">An emerging cyberinfrastructure for biodefense pathogen and pathogen-host data.</title><author><name sortKey="Zhang, C" sort="Zhang, C" uniqKey="Zhang C" first="C" last="Zhang">C. Zhang</name><affiliation><nlm:affiliation>Virginia Bioinformatics Institute at Virginia Polytechnic Institute and State University, Washington Street (0477), Blacksburg, VA 24061, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Crasta, O" sort="Crasta, O" uniqKey="Crasta O" first="O" last="Crasta">O. Crasta</name></author><author><name sortKey="Cammer, S" sort="Cammer, S" uniqKey="Cammer S" first="S" last="Cammer">S. Cammer</name></author><author><name sortKey="Will, R" sort="Will, R" uniqKey="Will R" first="R" last="Will">R. Will</name></author><author><name sortKey="Kenyon, R" sort="Kenyon, R" uniqKey="Kenyon R" first="R" last="Kenyon">R. Kenyon</name></author><author><name sortKey="Sullivan, D" sort="Sullivan, D" uniqKey="Sullivan D" first="D" last="Sullivan">D. Sullivan</name></author><author><name sortKey="Yu, Q" sort="Yu, Q" uniqKey="Yu Q" first="Q" last="Yu">Q. Yu</name></author><author><name sortKey="Sun, W" sort="Sun, W" uniqKey="Sun W" first="W" last="Sun">W. Sun</name></author><author><name sortKey="Jha, R" sort="Jha, R" uniqKey="Jha R" first="R" last="Jha">R. Jha</name></author><author><name sortKey="Liu, D" sort="Liu, D" uniqKey="Liu D" first="D" last="Liu">D. Liu</name></author><author><name sortKey="Xue, T" sort="Xue, T" uniqKey="Xue T" first="T" last="Xue">T. Xue</name></author><author><name sortKey="Zhang, Y" sort="Zhang, Y" uniqKey="Zhang Y" first="Y" last="Zhang">Y. Zhang</name></author><author><name sortKey="Moore, M" sort="Moore, M" uniqKey="Moore M" first="M" last="Moore">M. Moore</name></author><author><name sortKey="Mcgarvey, P" sort="Mcgarvey, P" uniqKey="Mcgarvey P" first="P" last="Mcgarvey">P. 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Sobral</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2008">2008</date><idno type="doi">10.1093/nar/gkm903</idno><idno type="RBID">pubmed:17984082</idno><idno type="pmid">17984082</idno><idno type="wicri:Area/PubMed/Corpus">000079</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">An emerging cyberinfrastructure for biodefense pathogen and pathogen-host data.</title><author><name sortKey="Zhang, C" sort="Zhang, C" uniqKey="Zhang C" first="C" last="Zhang">C. Zhang</name><affiliation><nlm:affiliation>Virginia Bioinformatics Institute at Virginia Polytechnic Institute and State University, Washington Street (0477), Blacksburg, VA 24061, USA.</nlm:affiliation></affiliation></author><author><name sortKey="Crasta, O" sort="Crasta, O" uniqKey="Crasta O" first="O" last="Crasta">O. Crasta</name></author><author><name sortKey="Cammer, S" sort="Cammer, S" uniqKey="Cammer S" first="S" last="Cammer">S. Cammer</name></author><author><name sortKey="Will, R" sort="Will, R" uniqKey="Will R" first="R" last="Will">R. Will</name></author><author><name sortKey="Kenyon, R" sort="Kenyon, R" uniqKey="Kenyon R" first="R" last="Kenyon">R. Kenyon</name></author><author><name sortKey="Sullivan, D" sort="Sullivan, D" uniqKey="Sullivan D" first="D" last="Sullivan">D. Sullivan</name></author><author><name sortKey="Yu, Q" sort="Yu, Q" uniqKey="Yu Q" first="Q" last="Yu">Q. Yu</name></author><author><name sortKey="Sun, W" sort="Sun, W" uniqKey="Sun W" first="W" last="Sun">W. Sun</name></author><author><name sortKey="Jha, R" sort="Jha, R" uniqKey="Jha R" first="R" last="Jha">R. Jha</name></author><author><name sortKey="Liu, D" sort="Liu, D" uniqKey="Liu D" first="D" last="Liu">D. Liu</name></author><author><name sortKey="Xue, T" sort="Xue, T" uniqKey="Xue T" first="T" last="Xue">T. Xue</name></author><author><name sortKey="Zhang, Y" sort="Zhang, Y" uniqKey="Zhang Y" first="Y" last="Zhang">Y. Zhang</name></author><author><name sortKey="Moore, M" sort="Moore, M" uniqKey="Moore M" first="M" last="Moore">M. Moore</name></author><author><name sortKey="Mcgarvey, P" sort="Mcgarvey, P" uniqKey="Mcgarvey P" first="P" last="Mcgarvey">P. Mcgarvey</name></author><author><name sortKey="Huang, H" sort="Huang, H" uniqKey="Huang H" first="H" last="Huang">H. Huang</name></author><author><name sortKey="Chen, Y" sort="Chen, Y" uniqKey="Chen Y" first="Y" last="Chen">Y. Chen</name></author><author><name sortKey="Zhang, J" sort="Zhang, J" uniqKey="Zhang J" first="J" last="Zhang">J. Zhang</name></author><author><name sortKey="Mazumder, R" sort="Mazumder, R" uniqKey="Mazumder R" first="R" last="Mazumder">R. Mazumder</name></author><author><name sortKey="Wu, C" sort="Wu, C" uniqKey="Wu C" first="C" last="Wu">C. Wu</name></author><author><name sortKey="Sobral, B" sort="Sobral, B" uniqKey="Sobral B" first="B" last="Sobral">B. Sobral</name></author></analytic><series><title level="j">Nucleic acids research</title><idno type="eISSN">1362-4962</idno><imprint><date when="2008" type="published">2008</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>Bacterial Proteins (chemistry)</term><term>Bacterial Proteins (genetics)</term><term>Bacterial Proteins (metabolism)</term><term>Bioterrorism</term><term>Computer Graphics</term><term>Databases, Protein</term><term>Gene Expression Profiling</term><term>Host-Pathogen Interactions</term><term>Humans</term><term>Infection (diagnosis)</term><term>Infection (therapy)</term><term>Internet</term><term>Mice</term><term>Proteomics</term><term>Protozoan Proteins (chemistry)</term><term>Protozoan Proteins (genetics)</term><term>Protozoan Proteins (metabolism)</term><term>Software</term><term>User-Computer Interface</term><term>Viral Proteins (chemistry)</term><term>Viral Proteins (genetics)</term><term>Viral Proteins (metabolism)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Bacterial Proteins</term><term>Protozoan Proteins</term><term>Viral Proteins</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Bacterial Proteins</term><term>Protozoan Proteins</term><term>Viral Proteins</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Bacterial Proteins</term><term>Protozoan Proteins</term><term>Viral Proteins</term></keywords><keywords scheme="MESH" qualifier="diagnosis" xml:lang="en"><term>Infection</term></keywords><keywords scheme="MESH" qualifier="therapy" xml:lang="en"><term>Infection</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Bioterrorism</term><term>Computer Graphics</term><term>Databases, Protein</term><term>Gene Expression Profiling</term><term>Host-Pathogen Interactions</term><term>Humans</term><term>Internet</term><term>Mice</term><term>Proteomics</term><term>Software</term><term>User-Computer Interface</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The NIAID-funded Biodefense Proteomics Resource Center (RC) provides storage, dissemination, visualization and analysis capabilities for the experimental data deposited by seven Proteomics Research Centers (PRCs). The data and its publication is to support researchers working to discover candidates for the next generation of vaccines, therapeutics and diagnostics against NIAID's Category A, B and C priority pathogens. The data includes transcriptional profiles, protein profiles, protein structural data and host-pathogen protein interactions, in the context of the pathogen life cycle in vivo and in vitro. The database has stored and supported host or pathogen data derived from Bacillus, Brucella, Cryptosporidium, Salmonella, SARS, Toxoplasma, Vibrio and Yersinia, human tissue libraries, and mouse macrophages. These publicly available data cover diverse data types such as mass spectrometry, yeast two-hybrid (Y2H), gene expression profiles, X-ray and NMR determined protein structures and protein expression clones. The growing database covers over 23 000 unique genes/proteins from different experiments and organisms. All of the genes/proteins are annotated and integrated across experiments using UniProt Knowledgebase (UniProtKB) accession numbers. The web-interface for the database enables searching, querying and downloading at the level of experiment, group and individual gene(s)/protein(s) via UniProtKB accession numbers or protein function keywords. The system is accessible at http://www.proteomicsresource.org/.</div></front></TEI><pubmed><MedlineCitation Owner="NLM" Status="MEDLINE"><PMID Version="1">17984082</PMID><DateCreated><Year>2008</Year><Month>01</Month><Day>15</Day></DateCreated><DateCompleted><Year>2008</Year><Month>03</Month><Day>17</Day></DateCompleted><DateRevised><Year>2014</Year><Month>09</Month><Day>04</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1362-4962</ISSN><JournalIssue CitedMedium="Internet"><Volume>36</Volume><Issue>Database issue</Issue><PubDate><Year>2008</Year><Month>Jan</Month></PubDate></JournalIssue><Title>Nucleic acids research</Title><ISOAbbreviation>Nucleic Acids Res.</ISOAbbreviation></Journal><ArticleTitle>An emerging cyberinfrastructure for biodefense pathogen and pathogen-host data.</ArticleTitle><Pagination><MedlinePgn>D884-91</MedlinePgn></Pagination><Abstract><AbstractText>The NIAID-funded Biodefense Proteomics Resource Center (RC) provides storage, dissemination, visualization and analysis capabilities for the experimental data deposited by seven Proteomics Research Centers (PRCs). The data and its publication is to support researchers working to discover candidates for the next generation of vaccines, therapeutics and diagnostics against NIAID's Category A, B and C priority pathogens. The data includes transcriptional profiles, protein profiles, protein structural data and host-pathogen protein interactions, in the context of the pathogen life cycle in vivo and in vitro. The database has stored and supported host or pathogen data derived from Bacillus, Brucella, Cryptosporidium, Salmonella, SARS, Toxoplasma, Vibrio and Yersinia, human tissue libraries, and mouse macrophages. These publicly available data cover diverse data types such as mass spectrometry, yeast two-hybrid (Y2H), gene expression profiles, X-ray and NMR determined protein structures and protein expression clones. The growing database covers over 23 000 unique genes/proteins from different experiments and organisms. All of the genes/proteins are annotated and integrated across experiments using UniProt Knowledgebase (UniProtKB) accession numbers. The web-interface for the database enables searching, querying and downloading at the level of experiment, group and individual gene(s)/protein(s) via UniProtKB accession numbers or protein function keywords. The system is accessible at http://www.proteomicsresource.org/.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>C</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Virginia Bioinformatics Institute at Virginia Polytechnic Institute and State University, Washington Street (0477), Blacksburg, VA 24061, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Crasta</LastName><ForeName>O</ForeName><Initials>O</Initials></Author><Author ValidYN="Y"><LastName>Cammer</LastName><ForeName>S</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Will</LastName><ForeName>R</ForeName><Initials>R</Initials></Author><Author ValidYN="Y"><LastName>Kenyon</LastName><ForeName>R</ForeName><Initials>R</Initials></Author><Author ValidYN="Y"><LastName>Sullivan</LastName><ForeName>D</ForeName><Initials>D</Initials></Author><Author ValidYN="Y"><LastName>Yu</LastName><ForeName>Q</ForeName><Initials>Q</Initials></Author><Author ValidYN="Y"><LastName>Sun</LastName><ForeName>W</ForeName><Initials>W</Initials></Author><Author ValidYN="Y"><LastName>Jha</LastName><ForeName>R</ForeName><Initials>R</Initials></Author><Author ValidYN="Y"><LastName>Liu</LastName><ForeName>D</ForeName><Initials>D</Initials></Author><Author ValidYN="Y"><LastName>Xue</LastName><ForeName>T</ForeName><Initials>T</Initials></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Y</ForeName><Initials>Y</Initials></Author><Author ValidYN="Y"><LastName>Moore</LastName><ForeName>M</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>McGarvey</LastName><ForeName>P</ForeName><Initials>P</Initials></Author><Author ValidYN="Y"><LastName>Huang</LastName><ForeName>H</ForeName><Initials>H</Initials></Author><Author ValidYN="Y"><LastName>Chen</LastName><ForeName>Y</ForeName><Initials>Y</Initials></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>J</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Mazumder</LastName><ForeName>R</ForeName><Initials>R</Initials></Author><Author ValidYN="Y"><LastName>Wu</LastName><ForeName>C</ForeName><Initials>C</Initials></Author><Author ValidYN="Y"><LastName>Sobral</LastName><ForeName>B</ForeName><Initials>B</Initials></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><GrantID>HHSN266200400061C</GrantID><Agency>PHS HHS</Agency><Country>United States</Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D052061">Research Support, N.I.H., Extramural</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2007</Year><Month>11</Month><Day>04</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Nucleic Acids Res</MedlineTA><NlmUniqueID>0411011</NlmUniqueID><ISSNLinking>0305-1048</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D001426">Bacterial Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D015800">Protozoan Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D014764">Viral Proteins</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><CommentsCorrectionsList><CommentsCorrections RefType="Cites"><RefSource>Annu Rev Genomics Hum Genet. 2001;2:343-72</RefSource><PMID Version="1">11701654</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Bioinformatics. 2007 Feb 1;23(3):383-4</RefSource><PMID Version="1">17204464</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Comput Biol Chem. 2004 Feb;28(1):87-96</RefSource><PMID Version="1">15022647</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nat Biotechnol. 2004 Apr;22(4):473-5</RefSource><PMID Version="1">15085805</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Science. 2004 Jul 2;305(5680):86-90</RefSource><PMID Version="1">15232106</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Annu Rev Genomics Hum Genet. 2004;5:267-93</RefSource><PMID Version="1">15485350</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Bioinformatics. 2004 Nov 22;20(17):3236-7</RefSource><PMID Version="1">15044231</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2005 Jan 1;33(Database issue):D46-53</RefSource><PMID Version="1">15608238</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Bioinformatics. 2005 Jan 1;21(1):116-21</RefSource><PMID Version="1">15297293</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Infect Immun. 2005 Feb;73(2):1069-80</RefSource><PMID Version="1">15664951</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Virol. 2005 Oct;79(20):12905-13</RefSource><PMID Version="1">16188992</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Virol. 2006 Aug;80(16):7894-901</RefSource><PMID Version="1">16873246</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Virol. 2007 Apr;81(7):3151-61</RefSource><PMID Version="1">17202208</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Virol. 2007 Apr;81(8):3913-21</RefSource><PMID Version="1">17229691</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Mol Cell Proteomics. 2007 Apr;6(4):717-27</RefSource><PMID Version="1">17228056</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Virol. 2007 Jun;81(12):6700-8</RefSource><PMID Version="1">17409150</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Infect Immun. 2007 Jul;75(7):3434-44</RefSource><PMID Version="1">17470545</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>BMC Bioinformatics. 2007;8:183</RefSource><PMID Version="1">17553167</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Structure. 2005 Nov;13(11):1665-75</RefSource><PMID Version="1">16271890</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2006 Jan 1;34(Database issue):D187-91</RefSource><PMID Version="1">16381842</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2006 Jan 1;34(Database issue):D655-8</RefSource><PMID Version="1">16381952</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2006 Jan 1;34(Database issue):D659-63</RefSource><PMID Version="1">16381953</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nat Rev Mol Cell Biol. 2006 Mar;7(3):198-210</RefSource><PMID Version="1">16496022</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Ann Biomed Eng. 2006 Feb;34(2):257-64</RefSource><PMID Version="1">16474915</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Proc Natl Acad Sci U S A. 2006 Apr 11;103(15):5717-22</RefSource><PMID Version="1">16581910</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>BMC Bioinformatics. 2006;7:70</RefSource><PMID Version="1">16480510</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>BMC Bioinformatics. 2006;7:176</RefSource><PMID Version="1">16569235</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Methods Mol Biol. 2006;328:217-28</RefSource><PMID Version="1">16785652</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Curr Opin Chem Biol. 2006 Aug;10(4):294-302</RefSource><PMID Version="1">16822703</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Mol Biosyst. 2006 Aug;2(8):364-70</RefSource><PMID Version="1">16880956</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Mol Cell Proteomics. 2006 Aug;5(8):1450-61</RefSource><PMID Version="1">16684765</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Bacteriol. 2006 Sep;188(17):6092-100</RefSource><PMID Version="1">16923876</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>J Biol Chem. 2006 Sep 29;281(39):29131-40</RefSource><PMID Version="1">16893888</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Mol Microbiol. 2006 Dec;62(5):1239-50</RefSource><PMID Version="1">17040488</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Brief Bioinform. 2006 Dec;7(4):318-30</RefSource><PMID Version="1">17040977</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Brief Funct Genomic Proteomic. 2006 Dec;5(4):261-72</RefSource><PMID Version="1">16772273</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>BMC Bioinformatics. 2006;7:532</RefSource><PMID Version="1">17169146</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2007 Jan;35(Database issue):D301-3</RefSource><PMID Version="1">17142228</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2007 Jan;35(Database issue):D401-6</RefSource><PMID Version="1">17142235</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>Nucleic Acids Res. 2007 Jan;35(Database issue):D5-12</RefSource><PMID Version="1">17170002</PMID></CommentsCorrections><CommentsCorrections RefType="Cites"><RefSource>OMICS. 2003 Spring;7(1):79-88</RefSource><PMID 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PubStatus="medline"><Year>2008</Year><Month>3</Month><Day>18</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2007</Year><Month>11</Month><Day>7</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pii">gkm903</ArticleId><ArticleId IdType="doi">10.1093/nar/gkm903</ArticleId><ArticleId IdType="pubmed">17984082</ArticleId><ArticleId IdType="pmc">PMC2239001</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
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|texte= An emerging cyberinfrastructure for biodefense pathogen and pathogen-host data.
}}
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