SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes
Identifieur interne : 000527 ( Pmc/Curation ); précédent : 000526; suivant : 000528SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes
Auteurs : Jennifer Wyffels [États-Unis] ; Benjamin L. King [États-Unis] ; James Vincent [États-Unis] ; Chuming Chen [États-Unis] ; Cathy H. Wu [États-Unis] ; Shawn W. Polson [États-Unis]Source :
- F1000Research [ 2046-1402 ] ; 2014.
Abstract
Chondrichthyan fishes are a diverse class of gnathostomes that provide a valuable perspective on fundamental characteristics shared by all jawed and limbed vertebrates. Studies of phylogeny, species diversity, population structure, conservation, and physiology are accelerated by genomic, transcriptomic and protein sequence data. These data are widely available for many sarcopterygii (coelacanth, lungfish and tetrapods) and actinoptergii (ray-finned fish including teleosts) taxa, but limited for chondrichthyan fishes. In this study, we summarize available data for chondrichthyes and describe resources for one of the largest projects to characterize one of these fish,
Url:
DOI: 10.12688/f1000research.4996.1
PubMed: 25309735
PubMed Central: 4184313
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King</name><affiliation wicri:level="1"><nlm:aff id="a2">Mount Desert Island Biological Laboratory, Salisbury Cove, ME, 04672, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Mount Desert Island Biological Laboratory, Salisbury Cove, ME, 04672</wicri:regionArea></affiliation></author><author><name sortKey="Vincent, James" sort="Vincent, James" uniqKey="Vincent J" first="James" last="Vincent">James Vincent</name><affiliation wicri:level="1"><nlm:aff id="a3">Vermont Genetics Network, University of Vermont, Burlington, VT, 05405, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Vermont Genetics Network, University of Vermont, Burlington, VT, 05405</wicri:regionArea></affiliation></author><author><name sortKey="Chen, Chuming" sort="Chen, Chuming" uniqKey="Chen C" first="Chuming" last="Chen">Chuming Chen</name><affiliation wicri:level="1"><nlm:aff id="a1">Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711</wicri:regionArea></affiliation></author><author><name sortKey="Wu, Cathy H" sort="Wu, Cathy H" uniqKey="Wu C" first="Cathy H." last="Wu">Cathy H. Wu</name><affiliation wicri:level="1"><nlm:aff id="a1">Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711</wicri:regionArea></affiliation></author><author><name sortKey="Polson, Shawn W" sort="Polson, Shawn W" uniqKey="Polson S" first="Shawn W." last="Polson">Shawn W. Polson</name><affiliation wicri:level="1"><nlm:aff id="a1">Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711</wicri:regionArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">25309735</idno><idno type="pmc">4184313</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4184313</idno><idno type="RBID">PMC:4184313</idno><idno type="doi">10.12688/f1000research.4996.1</idno><date when="2014">2014</date><idno type="wicri:Area/Pmc/Corpus">000527</idno><idno type="wicri:Area/Pmc/Curation">000527</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes</title><author><name sortKey="Wyffels, Jennifer" sort="Wyffels, Jennifer" uniqKey="Wyffels J" first="Jennifer" last="Wyffels">Jennifer Wyffels</name><affiliation wicri:level="1"><nlm:aff id="a1">Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711</wicri:regionArea></affiliation></author><author><name sortKey="L King, Benjamin" sort="L King, Benjamin" uniqKey="L King B" first="Benjamin" last="L. King">Benjamin L. King</name><affiliation wicri:level="1"><nlm:aff id="a2">Mount Desert Island Biological Laboratory, Salisbury Cove, ME, 04672, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Mount Desert Island Biological Laboratory, Salisbury Cove, ME, 04672</wicri:regionArea></affiliation></author><author><name sortKey="Vincent, James" sort="Vincent, James" uniqKey="Vincent J" first="James" last="Vincent">James Vincent</name><affiliation wicri:level="1"><nlm:aff id="a3">Vermont Genetics Network, University of Vermont, Burlington, VT, 05405, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Vermont Genetics Network, University of Vermont, Burlington, VT, 05405</wicri:regionArea></affiliation></author><author><name sortKey="Chen, Chuming" sort="Chen, Chuming" uniqKey="Chen C" first="Chuming" last="Chen">Chuming Chen</name><affiliation wicri:level="1"><nlm:aff id="a1">Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711</wicri:regionArea></affiliation></author><author><name sortKey="Wu, Cathy H" sort="Wu, Cathy H" uniqKey="Wu C" first="Cathy H." last="Wu">Cathy H. Wu</name><affiliation wicri:level="1"><nlm:aff id="a1">Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711</wicri:regionArea></affiliation></author><author><name sortKey="Polson, Shawn W" sort="Polson, Shawn W" uniqKey="Polson S" first="Shawn W." last="Polson">Shawn W. Polson</name><affiliation wicri:level="1"><nlm:aff id="a1">Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711</wicri:regionArea></affiliation></author></analytic><series><title level="j">F1000Research</title><idno type="eISSN">2046-1402</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Chondrichthyan fishes are a diverse class of gnathostomes that provide a valuable perspective on fundamental characteristics shared by all jawed and limbed vertebrates. Studies of phylogeny, species diversity, population structure, conservation, and physiology are accelerated by genomic, transcriptomic and protein sequence data. These data are widely available for many sarcopterygii (coelacanth, lungfish and tetrapods) and actinoptergii (ray-finned fish including teleosts) taxa, but limited for chondrichthyan fishes. In this study, we summarize available data for chondrichthyes and describe resources for one of the largest projects to characterize one of these fish,
<italic>Leucoraja erinacea</italic>, the little skate. SkateBase (
<ext-link ext-link-type="uri" xlink:href="http://skatebase.org">http://skatebase.org</ext-link>) serves as the skate genome project portal linking data, research tools, and teaching resources.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Inoue, Jg" uniqKey="Inoue J">JG Inoue</name></author><author><name sortKey="Miya, M" uniqKey="Miya M">M Miya</name></author><author><name sortKey="Lam, K" uniqKey="Lam K">K Lam</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ebert, Da" uniqKey="Ebert D">DA Ebert</name></author><author><name sortKey="Ho, H" uniqKey="Ho H">H Ho</name></author><author><name sortKey="White, Wt" uniqKey="White W">WT White</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Stevens, J" uniqKey="Stevens J">J Stevens</name></author><author><name sortKey="Bonfil, R" uniqKey="Bonfil R">R Bonfil</name></author><author><name sortKey="Dulvy, Nk" 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<front><journal-meta><journal-id journal-id-type="nlm-ta">F1000Res</journal-id><journal-id journal-id-type="iso-abbrev">F1000Res</journal-id><journal-id journal-id-type="pmc">F1000Research</journal-id><journal-title-group><journal-title>F1000Research</journal-title></journal-title-group><issn pub-type="epub">2046-1402</issn><publisher><publisher-name>F1000Research</publisher-name><publisher-loc>London, UK</publisher-loc></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">25309735</article-id><article-id pub-id-type="pmc">4184313</article-id><article-id pub-id-type="doi">10.12688/f1000research.4996.1</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group><subject>Articles</subject><subj-group><subject>Animal Genetics</subject></subj-group><subj-group><subject>Bioinformatics</subject></subj-group><subj-group><subject>Evolutionary/Comparative Genetics</subject></subj-group><subj-group><subject>Marine & Freshwater Ecology</subject></subj-group></subj-group></article-categories><title-group><article-title>SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes</article-title><fn-group content-type="pub-status"><fn><p>v1; ref status: indexed</p></fn></fn-group></title-group><contrib-group><contrib contrib-type="author"><name><surname>Wyffels</surname><given-names>Jennifer</given-names></name><xref ref-type="corresp" rid="c1">a</xref><xref ref-type="aff" rid="a1">1</xref></contrib><contrib contrib-type="author"><name><surname>L. King</surname><given-names>Benjamin</given-names></name><xref ref-type="aff" rid="a2">2</xref></contrib><contrib contrib-type="author"><name><surname>Vincent</surname><given-names>James</given-names></name><xref ref-type="aff" rid="a3">3</xref></contrib><contrib contrib-type="author"><name><surname>Chen</surname><given-names>Chuming</given-names></name><xref ref-type="aff" rid="a1">1</xref></contrib><contrib contrib-type="author"><name><surname>Wu</surname><given-names>Cathy H.</given-names></name><xref ref-type="aff" rid="a1">1</xref></contrib><contrib contrib-type="author"><name><surname>Polson</surname><given-names>Shawn W.</given-names></name><xref ref-type="aff" rid="a1">1</xref></contrib><aff id="a1"><label>1</label>Department of Computer and Information Sciences, Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA</aff><aff id="a2"><label>2</label>Mount Desert Island Biological Laboratory, Salisbury Cove, ME, 04672, USA</aff><aff id="a3"><label>3</label>Vermont Genetics Network, University of Vermont, Burlington, VT, 05405, USA</aff></contrib-group><author-notes><corresp id="c1"><label>a</label><email xlink:href="mailto:wyffels@udel.edu">wyffels@udel.edu</email></corresp><fn fn-type="con"><p>The little skate genome project is a collaborative effort with participation from all authors. JTW and BLK prepared the first draft of the manuscript. SWP oversaw the design and implementation of the SkateBase web portal and SkateBLAST tool. All authors were involved with the revision of the draft manuscript and have agreed to the final content.</p></fn><fn fn-type="conflict"><p><bold>Competing interests: </bold>The authors declare to have no competing interests.</p></fn></author-notes><pub-date pub-type="epub"><day>12</day><month>8</month><year>2014</year></pub-date><pub-date pub-type="collection"><year>2014</year></pub-date><volume>3</volume><elocation-id>191</elocation-id><history><date date-type="accepted"><day>12</day><month>8</month><year>2014</year></date></history><permissions><copyright-statement>Copyright: © 2014 Wyffels J et al.</copyright-statement><copyright-year>2014</copyright-year><license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/4.0/"><license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p></license><license license-type="open-access" xlink:href="http://creativecommons.org/publicdomain/zero/1.0/"><license-p>Data associated with the article are available under the terms of the Creative Commons Zero "No rights reserved" data waiver (CC0 1.0 Public domain dedication).</license-p></license></permissions><self-uri content-type="pdf" xlink:type="simple" xlink:href="f1000research-3-5333.pdf"></self-uri><abstract><p>Chondrichthyan fishes are a diverse class of gnathostomes that provide a valuable perspective on fundamental characteristics shared by all jawed and limbed vertebrates. Studies of phylogeny, species diversity, population structure, conservation, and physiology are accelerated by genomic, transcriptomic and protein sequence data. These data are widely available for many sarcopterygii (coelacanth, lungfish and tetrapods) and actinoptergii (ray-finned fish including teleosts) taxa, but limited for chondrichthyan fishes. In this study, we summarize available data for chondrichthyes and describe resources for one of the largest projects to characterize one of these fish,
<italic>Leucoraja erinacea</italic>, the little skate. SkateBase (
<ext-link ext-link-type="uri" xlink:href="http://skatebase.org">http://skatebase.org</ext-link>) serves as the skate genome project portal linking data, research tools, and teaching resources.</p></abstract><funding-group><award-group id="fund-1"><funding-source>National Institute of General Medical Sciences</funding-source></award-group><award-group id="fund-2"><funding-source>IDeA Networks of Biomedical Research Excellence</funding-source><award-id>3P20GM103446-12S1</award-id></award-group><award-group id="fund-3"><funding-source>National Institutes of Health</funding-source><award-id>5P20RR016463-12</award-id><award-id>5P20RR016472-12</award-id><award-id>5 P20 RR16462</award-id><award-id>5P20RR016457-11</award-id><award-id>5P20RR030360-03</award-id><award-id>8 P20 GM103423-12</award-id><award-id>8P20GM103446-12</award-id><award-id>8P20GM103449</award-id><award-id>8 P20 GM103430-11</award-id><award-id>8P20GM103506-03</award-id></award-group><award-group id="fund-4"><funding-source>National Center for Research Resources</funding-source></award-group><award-group id="fund-5"><funding-source>ARRA Supplements</funding-source></award-group><award-group id="fund-6"><funding-source>North East Cyberinfrastructure Consortium</funding-source></award-group><award-group id="fund-7"><funding-source>NSF Experimental Program to Stimulate Competitive Research</funding-source><award-id>EPS-0904155</award-id><award-id>EPS-1101317</award-id><award-id>EPS-1004057</award-id><award-id>EPS-1101245</award-id></award-group><funding-statement>This work was supported by a re-entry career award to JTW, National Institute of General Medical Sciences (NIGMS) IDeA Networks of Biomedical Research Excellence (INBRE) 3P20GM103446-12S1. Skate genome sequencing was funded by National Institutes of Health (NIH) National Center for Research Resources (NCRR) ARRA Supplements to 5P20RR016463-12 (MDIBL), 5P20RR016472-12 (UD), and 5P20RR16462 (UVM). The North East Cyberinfrastructure Consortium (NECC) is funded by NIH NCRR grants 5P20RR016463-12 (MDIBL), 5P20RR016472-12 (UD), 5 P20 RR16462 (UVM), 5P20RR016457-11 (URI), and 5P20RR030360-03 (UNH) and NIH NIGMS grants 8 P20 GM103423-12 (MDIBL), 8P20GM103446-12 (UD), 8P20GM103449 (UVM), 8 P20 GM103430-11 (URI), and 8P20GM103506-03 (Dartmouth), and NSF Experimental Program to Stimulate Competitive Research (EPSCoR) grants EPS-0904155 (UM), EPS-081425 (UD), EPS-1101317 (UVM), EPS-1004057 (URI), and EPS-1101245 (UNH).</funding-statement></funding-group></article-meta></front><sub-article id="report5798" article-type="peer-review"><front-stub><article-id pub-id-type="doi">10.5256/f1000research.5333.r5798</article-id><title-group><article-title>Referee response for version 1</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Heist</surname><given-names>Ed</given-names></name><xref ref-type="aff" rid="r5798a1">1</xref><role>Referee</role></contrib><aff id="r5798a1"><label>1</label>Department of Zoology, Southern Illinois University, Carbondale, USA</aff></contrib-group><author-notes><fn fn-type="conflict"><p><bold>Competing interests: </bold>No competing interests were disclosed.</p></fn></author-notes><pub-date pub-type="epub"><day>1</day><month>9</month><year>2014</year></pub-date><related-article id="d35e9332" related-article-type="peer-reviewed-article" ext-link-type="doi" xlink:href="10.12688/f1000research.4996.1">Version </related-article><custom-meta-group><custom-meta><meta-name>recommendation</meta-name><meta-value>approve</meta-value></custom-meta></custom-meta-group></front-stub><body><p>This manuscript has two components: a description of current genomic, proteomic, and transcriptomic resources for chondrichthyan fishes and a description of the SkateBase project. Of the two, I would rather have seen more emphasis on SkateBase since the rate at which new data are being generated will make the survey data presented in the manuscript increasingly incomplete. Nevertheless I think it is a good paper worthy of publication and SkateBase seems to be a valuable resource.</p><p>Specific comments include:</p><p>Abstract – capitalize Sarcopterygii, Actinopterygii misspelled. Throughout the manuscript there are numerous inconsistencies in capitalization, e.g. “order Chimaeriformes” and “Fish barcode of life (FISH-BOL) a working group of the International Barcode of Life Project (iBOL)” both on page 8.</p><p>Introduction – In the first sentence replace “Chondrichthyan fishes” with “Living chondrichthyan fishes.”</p><p>Paragraph 2 – The text implies that the only benefits of chondrichthyans are ecotourism and fisheries. Perhaps a mention of ecological services (e.g. food-web dynamics) or other benefits of chondrichthyan conservation would be appropriate here.</p><p>Paragraph 4 – “asexual” parthenogenesis seems redundant.</p><p>Paragraph 5 – perhaps some more details on the distribution, life history, reproductive mode, genome size etc. of little skate is in order. Why is the geographic location of the species relevant?</p><p>Figure 1 is hard for me to decipher. I can’t figure out what the two separate outer rings indicate and why the spacing between them is different for the orders vs. the families, genera, and species. I really think this figure is too complex and tries to cram too much information that is peripheral to the goals of the paper into a single figure. I may be old fashioned, but I think a table that listed the numbers of families, genera, and species would have been sufficient. There also needs to be a citation on the source of the information as the taxonomy and number of recognized species of chondrichthyans is changing. </p><p>Figure 4B – A citation is needed for the cladogram.</p><p>I have read this submission. I believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard.</p></body></sub-article><sub-article id="report5793" article-type="peer-review"><front-stub><article-id pub-id-type="doi">10.5256/f1000research.5333.r5793</article-id><title-group><article-title>Referee response for version 1</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Feldheim</surname><given-names>Kevin</given-names></name><xref ref-type="aff" rid="r5793a1">1</xref><role>Referee</role></contrib><aff id="r5793a1"><label>1</label>Pritzker Laboratory for Molecular Systematics and Evolution, Field Museum of Natural History, Chicago, USA</aff></contrib-group><author-notes><fn fn-type="conflict"><p><bold>Competing interests: </bold>No competing interests were disclosed.</p></fn></author-notes><pub-date pub-type="epub"><day>26</day><month>8</month><year>2014</year></pub-date><related-article id="d35e9396" related-article-type="peer-reviewed-article" ext-link-type="doi" xlink:href="10.12688/f1000research.4996.1">Version </related-article><custom-meta-group><custom-meta><meta-name>recommendation</meta-name><meta-value>approve</meta-value></custom-meta></custom-meta-group></front-stub><body><p>The authors describe a publicly accessible database SkateBase, a public site for the little skate genome project. This paper is well written, and I have just a few comments and suggestions:</p><p>
<list list-type="bullet"><list-item><p>Why was the little skate picked for genome size? Is it small and manageable? Is it a typical size compared to other chondrichthyans?</p></list-item><list-item><p>Page 3, 1
<sup>st</sup> column: change “compliance with fishing quotas” to “maintain compliance with fishing quotas”.</p></list-item><list-item><p>Page 3, 2
<sup>nd</sup> column: Heterodontiformes is misspelled (Heterdontiformes).</p></list-item><list-item><p>Page 3, 2
<sup>nd</sup> column: Lamniformes is misspelled (Lamniormes).</p></list-item><list-item><p>Page 3, under “Existing resources” I suggest including Chimaeriformes here as well.</p></list-item><list-item><p>Page 7:
<italic>Heterodontus</italic> is misspelled (
<italic>Heterdontus</italic>).</p></list-item><list-item><p>Page 8: species name for hagfish should be
<italic>burgeri</italic> (not
<italic>burger</italic>).</p></list-item><list-item><p>Page 8: The last three sentences under the “Protein databases” section can be incorporated into the legend for Figure 4.</p></list-item><list-item><p>Page 8: bichir is misspelled (birchir).</p></list-item><list-item><p>Page 8: change “SkateBase data is linked” to “SkateBase data are linked” and “SkateBase data includes” to “SkateBase data include”.</p></list-item><list-item><p>Page 19, 1
<sup>st</sup> column: change “this data” to “these data”.</p></list-item></list> </p><p>Figures and Tables:</p><p>
<list list-type="bullet"><list-item><p>In the figure 1 legend — most of this information is stated in the text. I suggest keeping the sentence: “The distribution of chondrichthyan species in each of the 14 orders is shown relative to the total number of species, genera and families for the clade.” I also suggest explaining the figure in a little more detail. What do the numbers mean? Do the colors represent anything?</p></list-item><list-item><p>Figure 2 legend: “is” should not be italicized.</p></list-item><list-item><p>Table 1: What do the numbers in the columns mean? Are these numbers of entries?</p></list-item><list-item><p>Table 2: Contigs for
<italic>L. erinacea </italic>is 2,62,265. Also, under N50, change 1466 to 1,466.</p></list-item><list-item><p>Figure 4: It is difficult to tell apart colors for the following pairs:</p><p>
<list list-type="bullet"><list-item><p>Squatiniformes and Carcharhiniformes</p></list-item><list-item><p>Lamniformes and Myliobatiformes</p></list-item><list-item><p>Chimaeriformes and Rajiiformes</p></list-item></list></p></list-item><list-item><p>This can be rectified by using black, white and yellow for three of the above orders in the figure.</p></list-item><list-item><p>Figure 5 legend: I suggest changing “Four important fields in the output should be examined carefully to interpret the alignments and determine which returned alignment best represents the skate ortholog to SOCS6. First, the alignment score, E-value, alignment length and percent identity can be used to interpret the overall alignment significance.” to “Four important fields in the output should be examined carefully to interpret the alignments: the alignment score, E-value, alignment length and percent identity.”</p></list-item></list></p><p>I have read this submission. I believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard.</p></body></sub-article></pmc></record>Pour manipuler ce document sous Unix (Dilib)
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HfdIndexSelect -h $EXPLOR_AREA/Data/Pmc/Curation/RBID.i -Sk "pubmed:25309735" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Pmc/Curation/biblio.hfd \
| NlmPubMed2Wicri -a CyberinfraV1
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