Evolution of Asian Interior Arid-Zone Biota: Evidence from the Diversification of Asian Zygophyllum (Zygophyllaceae)
Identifieur interne : 000080 ( Pmc/Curation ); précédent : 000079; suivant : 000081Evolution of Asian Interior Arid-Zone Biota: Evidence from the Diversification of Asian Zygophyllum (Zygophyllaceae)
Auteurs : Sheng-Dan Wu [République populaire de Chine] ; Li Lin [République populaire de Chine] ; Hong-Lei Li [République populaire de Chine] ; Sheng-Xiang Yu [République populaire de Chine] ; Lin-Jing Zhang [République populaire de Chine] ; Wei Wang [République populaire de Chine]Source :
- PLoS ONE [ 1932-6203 ] ; 2015.
Abstract
The Asian interior arid zone is the largest desert landform system in the Northern Hemisphere, and has high biodiversity. Little is currently known about the evolutionary history of its biota. In this study, we used
Url:
DOI: 10.1371/journal.pone.0138697
PubMed: 26393796
PubMed Central: 4579068
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<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Evolution of Asian Interior Arid-Zone Biota: Evidence from the Diversification of Asian <italic>Zygophyllum</italic>
(Zygophyllaceae)</title>
<author><name sortKey="Wu, Sheng Dan" sort="Wu, Sheng Dan" uniqKey="Wu S" first="Sheng-Dan" last="Wu">Sheng-Dan Wu</name>
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<author><name sortKey="Zhang, Lin Jing" sort="Zhang, Lin Jing" uniqKey="Zhang L" first="Lin-Jing" last="Zhang">Lin-Jing Zhang</name>
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<front><div type="abstract" xml:lang="en"><p>The Asian interior arid zone is the largest desert landform system in the Northern Hemisphere, and has high biodiversity. Little is currently known about the evolutionary history of its biota. In this study, we used <italic>Zygophyllum</italic>
, an important and characteristic component of the Asian interior arid zone, to provide new insights into the evolution of this biota. By greatly enlarged taxon sampling, we present the phylogenetic analysis of Asian <italic>Zygophyllum</italic>
based on two plastid and one nuclear markers. Our phylogenetic analyses indicate that Asian <italic>Zygophyllum</italic>
and <italic>Sarcozygium</italic>
form a clade and <italic>Sarcozygium</italic>
is further embedded within the shrub subclade. An integration of phylogenetic, biogeographic, and molecular dating methods indicates that <italic>Zygophyllum</italic>
successfully colonized the Asian interior from Africa in the early Oligocene, and Asian <italic>Zygophyllum</italic>
became differentiated in the early Miocene and underwent a burst of diversification in the late Miocene associated with the expansion of Asian interior arid lands due to orogenetic and climatic changes. Combining diversification patterns of other important components of the Asian interior arid zone, we propose a multi-stage evolution model for this biota: the late Eocene–early Oligocene origin, the early Miocene expansion, and the middle-late Miocene rapid expansion to the whole Asian interior arid zone. This study also demonstrates that, for <italic>Zygophyllum</italic>
and perhaps other arid-adapted organisms, arid biomes are evolutionary cradles of diversity.</p>
</div>
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<author><name sortKey="Fang, Xm" uniqKey="Fang X">XM Fang</name>
</author>
<author><name sortKey="Yan, Xl" uniqKey="Yan X">XL Yan</name>
</author>
<author><name sortKey="Wu, Fl" uniqKey="Wu F">FL Wu</name>
</author>
<author><name sortKey="Song, Ch" uniqKey="Song C">CH Song</name>
</author>
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<author><name sortKey="Fritsch, Pw" uniqKey="Fritsch P">PW Fritsch</name>
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<pmc article-type="research-article"><pmc-dir>properties open_access</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-ta">PLoS One</journal-id>
<journal-id journal-id-type="iso-abbrev">PLoS ONE</journal-id>
<journal-id journal-id-type="publisher-id">plos</journal-id>
<journal-id journal-id-type="pmc">plosone</journal-id>
<journal-title-group><journal-title>PLoS ONE</journal-title>
</journal-title-group>
<issn pub-type="epub">1932-6203</issn>
<publisher><publisher-name>Public Library of Science</publisher-name>
<publisher-loc>San Francisco, CA USA</publisher-loc>
</publisher>
</journal-meta>
<article-meta><article-id pub-id-type="pmid">26393796</article-id>
<article-id pub-id-type="pmc">4579068</article-id>
<article-id pub-id-type="doi">10.1371/journal.pone.0138697</article-id>
<article-id pub-id-type="publisher-id">PONE-D-15-20044</article-id>
<article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject>
</subj-group>
</article-categories>
<title-group><article-title>Evolution of Asian Interior Arid-Zone Biota: Evidence from the Diversification of Asian <italic>Zygophyllum</italic>
(Zygophyllaceae)</article-title>
<alt-title alt-title-type="running-head">Evolution of Asian Interior Arid-Zone Biota</alt-title>
</title-group>
<contrib-group><contrib contrib-type="author" equal-contrib="yes"><name><surname>Wu</surname>
<given-names>Sheng-Dan</given-names>
</name>
<xref ref-type="aff" rid="aff001"><sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff002"><sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" equal-contrib="yes"><name><surname>Lin</surname>
<given-names>Li</given-names>
</name>
<xref ref-type="aff" rid="aff002"><sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Li</surname>
<given-names>Hong-Lei</given-names>
</name>
<xref ref-type="aff" rid="aff002"><sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff003"><sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Yu</surname>
<given-names>Sheng-Xiang</given-names>
</name>
<xref ref-type="aff" rid="aff002"><sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Zhang</surname>
<given-names>Lin-Jing</given-names>
</name>
<xref ref-type="aff" rid="aff001"><sup>1</sup>
</xref>
<xref rid="cor001" ref-type="corresp">*</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Wang</surname>
<given-names>Wei</given-names>
</name>
<xref ref-type="aff" rid="aff002"><sup>2</sup>
</xref>
<xref rid="cor001" ref-type="corresp">*</xref>
</contrib>
</contrib-group>
<aff id="aff001"><label>1</label>
<addr-line>College of Life Sciences, Shanxi Normal University, Linfen, China</addr-line>
</aff>
<aff id="aff002"><label>2</label>
<addr-line>State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing, China</addr-line>
</aff>
<aff id="aff003"><label>3</label>
<addr-line>Key Laboratory of Southern Subtropical Plant Diversity, Fairylake Botanical Garden, Shenzhen & Chinese Academy of Sciences, Shenzhen, China</addr-line>
</aff>
<contrib-group><contrib contrib-type="editor"><name><surname>Liu</surname>
<given-names>Zhong-Jian</given-names>
</name>
<role>Editor</role>
<xref ref-type="aff" rid="edit1"></xref>
</contrib>
</contrib-group>
<aff id="edit1"><addr-line>The National Orchid Conservation Center of China; The Orchid Conservation & Research Center of Shenzhen, CHINA</addr-line>
</aff>
<author-notes><fn fn-type="conflict" id="coi001"><p><bold>Competing Interests: </bold>
The authors have declared that no competing interests exist.</p>
</fn>
<fn fn-type="con" id="contrib001"><p>Conceived and designed the experiments: WW LJZ. Performed the experiments: SDW LJZ. Analyzed the data: SDW LL HLL SXY WW. Contributed reagents/materials/analysis tools: SDW LL SXY. Wrote the paper: SDW WW.</p>
</fn>
<corresp id="cor001">* E-mail: <email>wangwei1127@ibcas.ac.cn</email>
(WW); <email>linjingzh@aliyun.com</email>
(LJZ)</corresp>
</author-notes>
<pub-date pub-type="epub"><day>22</day>
<month>9</month>
<year>2015</year>
</pub-date>
<pub-date pub-type="collection"><year>2015</year>
</pub-date>
<volume>10</volume>
<issue>9</issue>
<elocation-id>e0138697</elocation-id>
<history><date date-type="received"><day>11</day>
<month>5</month>
<year>2015</year>
</date>
<date date-type="accepted"><day>2</day>
<month>9</month>
<year>2015</year>
</date>
</history>
<permissions><copyright-year>2015</copyright-year>
<copyright-holder>Wu et al</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><license-p>This is an open access article distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution License</ext-link>
, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited</license-p>
</license>
</permissions>
<self-uri content-type="pdf" xlink:type="simple" xlink:href="pone.0138697.pdf"></self-uri>
<abstract><p>The Asian interior arid zone is the largest desert landform system in the Northern Hemisphere, and has high biodiversity. Little is currently known about the evolutionary history of its biota. In this study, we used <italic>Zygophyllum</italic>
, an important and characteristic component of the Asian interior arid zone, to provide new insights into the evolution of this biota. By greatly enlarged taxon sampling, we present the phylogenetic analysis of Asian <italic>Zygophyllum</italic>
based on two plastid and one nuclear markers. Our phylogenetic analyses indicate that Asian <italic>Zygophyllum</italic>
and <italic>Sarcozygium</italic>
form a clade and <italic>Sarcozygium</italic>
is further embedded within the shrub subclade. An integration of phylogenetic, biogeographic, and molecular dating methods indicates that <italic>Zygophyllum</italic>
successfully colonized the Asian interior from Africa in the early Oligocene, and Asian <italic>Zygophyllum</italic>
became differentiated in the early Miocene and underwent a burst of diversification in the late Miocene associated with the expansion of Asian interior arid lands due to orogenetic and climatic changes. Combining diversification patterns of other important components of the Asian interior arid zone, we propose a multi-stage evolution model for this biota: the late Eocene–early Oligocene origin, the early Miocene expansion, and the middle-late Miocene rapid expansion to the whole Asian interior arid zone. This study also demonstrates that, for <italic>Zygophyllum</italic>
and perhaps other arid-adapted organisms, arid biomes are evolutionary cradles of diversity.</p>
</abstract>
<funding-group><funding-statement>This research was partially supported by the National Basic Research Program of China (grant no. 2014CB954100), the National Natural Science Foundation of China (grant nos. 41571499, 31270269, 31470315), the Opening Foundation of the Key Laboratory of Resource Biology and Biotechnology in Western China (Northwest University), and the Ministry of Education (ZS12014), Shanxi Scholarship Council of China [2010]14-62.</funding-statement>
</funding-group>
<counts><fig-count count="4"></fig-count>
<table-count count="0"></table-count>
<page-count count="17"></page-count>
</counts>
<custom-meta-group><custom-meta id="data-availability"><meta-name>Data Availability</meta-name>
<meta-value>All sequences files are available from the GenBank database (accession numbers KR001980- KR002035).</meta-value>
</custom-meta>
</custom-meta-group>
</article-meta>
<notes><title>Data Availability</title>
<p>All sequences files are available from the GenBank database (accession numbers KR001980- KR002035).</p>
</notes>
</front>
</pmc>
</record>
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