Viromes, Not Gene Markers, for Studying Double-Stranded DNA Virus Communities
Identifieur interne : 000587 ( Ncbi/Merge ); précédent : 000586; suivant : 000588Viromes, Not Gene Markers, for Studying Double-Stranded DNA Virus Communities
Auteurs : Matthew B. SullivanSource :
- Journal of Virology [ 0022-538X ] ; 2014.
Abstract
Microbes have recently been recognized as dominant forces in nature, with studies benefiting from gene markers that can be quickly, informatively, and universally surveyed. Viruses, where explored, have proven to be powerful modulators of locally and globally important microbes through mortality, horizontal gene transfer, and metabolic reprogramming. However, community-wide virus studies have been challenged by the lack of a universal marker. Here, I propose that viral metagenomics has advanced to largely take over study of double-stranded DNA viruses.
Url:
DOI: 10.1128/JVI.03289-14
PubMed: 25540374
PubMed Central: 4325738
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<front><journal-meta><journal-id journal-id-type="nlm-ta">J Virol</journal-id><journal-id journal-id-type="iso-abbrev">J. Virol</journal-id><journal-id journal-id-type="hwp">jvi</journal-id><journal-id journal-id-type="pmc">jvi</journal-id><journal-id journal-id-type="publisher-id">JVI</journal-id><journal-title-group><journal-title>Journal of Virology</journal-title></journal-title-group><issn pub-type="ppub">0022-538X</issn><issn pub-type="epub">1098-5514</issn><publisher><publisher-name>American Society for Microbiology</publisher-name><publisher-loc>1752 N St., N.W., Washington, DC</publisher-loc></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">25540374</article-id><article-id pub-id-type="pmc">4325738</article-id><article-id pub-id-type="publisher-id">03289-14</article-id><article-id pub-id-type="doi">10.1128/JVI.03289-14</article-id><article-categories><subj-group subj-group-type="heading"><subject>Gems</subject></subj-group></article-categories><title-group><article-title>Viromes, Not Gene Markers, for Studying Double-Stranded DNA Virus Communities</article-title><alt-title alt-title-type="running-head">Gem</alt-title></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name><surname>Sullivan</surname><given-names>Matthew B.</given-names></name></contrib><aff>Department of Ecology and Evolutionary Biology, University of Arizona, Tucson Arizona, USA</aff></contrib-group><contrib-group><contrib contrib-type="editor"><name><surname>Sullivan</surname><given-names>C. S.</given-names></name><role>Editor</role></contrib></contrib-group><author-notes><corresp id="cor1">Address correspondence to <email>mbsulli@email.arizona.edu</email>.</corresp><fn fn-type="other"><p><bold>Citation</bold> Sullivan MB. 2015. Viromes, not gene markers, for studying double-stranded DNA virus communities. J Virol 89:2459–2461. doi:<ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1128/JVI.03289-14">10.1128/JVI.03289-14</ext-link>.</p></fn></author-notes><pub-date pub-type="epub"><day>24</day><month>12</month><year>2014</year></pub-date><pub-date pub-type="collection"><day>1</day><month>3</month><year>2015</year></pub-date><volume>89</volume><issue>5</issue><fpage>2459</fpage><lpage>2461</lpage><permissions><copyright-statement>Copyright © 2015, American Society for Microbiology. All Rights Reserved.</copyright-statement><copyright-year>2015</copyright-year><copyright-holder>American Society for Microbiology</copyright-holder></permissions><self-uri content-type="pdf" xlink:href="zjv00515002459.pdf"></self-uri><abstract><p>Microbes have recently been recognized as dominant forces in nature, with studies benefiting from gene markers that can be quickly, informatively, and universally surveyed. Viruses, where explored, have proven to be powerful modulators of locally and globally important microbes through mortality, horizontal gene transfer, and metabolic reprogramming. However, community-wide virus studies have been challenged by the lack of a universal marker. Here, I propose that viral metagenomics has advanced to largely take over study of double-stranded DNA viruses.</p></abstract><counts><fig-count count="1"></fig-count><table-count count="0"></table-count><equation-count count="0"></equation-count><ref-count count="20"></ref-count><page-count count="3"></page-count><word-count count="2300"></word-count></counts><custom-meta-group><custom-meta><meta-name>access-type</meta-name><meta-value>free</meta-value></custom-meta></custom-meta-group></article-meta></front></pmc><affiliations><list></list><tree><noCountry><name sortKey="Sullivan, Matthew B" sort="Sullivan, Matthew B" uniqKey="Sullivan M" first="Matthew B." last="Sullivan">Matthew B. Sullivan</name></noCountry></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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