Bioinformatic Approaches Reveal Metagenomic Characterization of Soil Microbial Community
Identifieur interne : 000242 ( Main/Exploration ); précédent : 000241; suivant : 000243Bioinformatic Approaches Reveal Metagenomic Characterization of Soil Microbial Community
Auteurs : Zhuofei Xu ; Martin Asser Hansen ; Lars H. Hansen ; Samuel Jacquiod ; S Ren J. S RensenSource :
- PLoS ONE [ 1932-6203 ] ; 2014.
Abstract
As is well known, soil is a complex ecosystem harboring the most prokaryotic biodiversity on the Earth. In recent years, the advent of high-throughput sequencing techniques has greatly facilitated the progress of soil ecological studies. However, how to effectively understand the underlying biological features of large-scale sequencing data is a new challenge. In the present study, we used 33 publicly available metagenomes from diverse soil sites (i.e. grassland, forest soil, desert, Arctic soil, and mangrove sediment) and integrated some state-of-the-art computational tools to explore the phylogenetic and functional characterizations of the microbial communities in soil. Microbial composition and metabolic potential in soils were comprehensively illustrated at the metagenomic level. A spectrum of metagenomic biomarkers containing 46 taxa and 33 metabolic modules were detected to be significantly differential that could be used as indicators to distinguish at least one of five soil communities. The co-occurrence associations between complex microbial compositions and functions were inferred by network-based approaches. Our results together with the established bioinformatic pipelines should provide a foundation for future research into the relation between soil biodiversity and ecosystem function.
Url:
DOI: 10.1371/journal.pone.0093445
PubMed: 24691166
PubMed Central: 3972102
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: 000630
- to stream Pmc, to step Curation: 000630
- to stream Pmc, to step Checkpoint: 000229
- to stream Ncbi, to step Merge: 000512
- to stream Ncbi, to step Curation: 000512
- to stream Ncbi, to step Checkpoint: 000512
- to stream Main, to step Merge: 000242
- to stream Main, to step Curation: 000242
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Bioinformatic Approaches Reveal Metagenomic Characterization of Soil Microbial Community</title>
<author><name sortKey="Xu, Zhuofei" sort="Xu, Zhuofei" uniqKey="Xu Z" first="Zhuofei" last="Xu">Zhuofei Xu</name>
<affiliation><nlm:aff id="aff1"></nlm:aff>
</affiliation>
</author>
<author><name sortKey="Hansen, Martin Asser" sort="Hansen, Martin Asser" uniqKey="Hansen M" first="Martin Asser" last="Hansen">Martin Asser Hansen</name>
<affiliation><nlm:aff id="aff1"></nlm:aff>
</affiliation>
</author>
<author><name sortKey="Hansen, Lars H" sort="Hansen, Lars H" uniqKey="Hansen L" first="Lars H." last="Hansen">Lars H. Hansen</name>
<affiliation><nlm:aff id="aff1"></nlm:aff>
</affiliation>
</author>
<author><name sortKey="Jacquiod, Samuel" sort="Jacquiod, Samuel" uniqKey="Jacquiod S" first="Samuel" last="Jacquiod">Samuel Jacquiod</name>
<affiliation><nlm:aff id="aff1"></nlm:aff>
</affiliation>
</author>
<author><name sortKey="S Rensen, S Ren J" sort="S Rensen, S Ren J" uniqKey="S Rensen S" first="S Ren J." last="S Rensen">S Ren J. S Rensen</name>
<affiliation><nlm:aff id="aff1"></nlm:aff>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PMC</idno>
<idno type="pmid">24691166</idno>
<idno type="pmc">3972102</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3972102</idno>
<idno type="RBID">PMC:3972102</idno>
<idno type="doi">10.1371/journal.pone.0093445</idno>
<date when="2014">2014</date>
<idno type="wicri:Area/Pmc/Corpus">000630</idno>
<idno type="wicri:Area/Pmc/Curation">000630</idno>
<idno type="wicri:Area/Pmc/Checkpoint">000229</idno>
<idno type="wicri:Area/Ncbi/Merge">000512</idno>
<idno type="wicri:Area/Ncbi/Curation">000512</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000512</idno>
<idno type="wicri:Area/Main/Merge">000242</idno>
<idno type="wicri:Area/Main/Curation">000242</idno>
<idno type="wicri:Area/Main/Exploration">000242</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Bioinformatic Approaches Reveal Metagenomic Characterization of Soil Microbial Community</title>
<author><name sortKey="Xu, Zhuofei" sort="Xu, Zhuofei" uniqKey="Xu Z" first="Zhuofei" last="Xu">Zhuofei Xu</name>
<affiliation><nlm:aff id="aff1"></nlm:aff>
</affiliation>
</author>
<author><name sortKey="Hansen, Martin Asser" sort="Hansen, Martin Asser" uniqKey="Hansen M" first="Martin Asser" last="Hansen">Martin Asser Hansen</name>
<affiliation><nlm:aff id="aff1"></nlm:aff>
</affiliation>
</author>
<author><name sortKey="Hansen, Lars H" sort="Hansen, Lars H" uniqKey="Hansen L" first="Lars H." last="Hansen">Lars H. Hansen</name>
<affiliation><nlm:aff id="aff1"></nlm:aff>
</affiliation>
</author>
<author><name sortKey="Jacquiod, Samuel" sort="Jacquiod, Samuel" uniqKey="Jacquiod S" first="Samuel" last="Jacquiod">Samuel Jacquiod</name>
<affiliation><nlm:aff id="aff1"></nlm:aff>
</affiliation>
</author>
<author><name sortKey="S Rensen, S Ren J" sort="S Rensen, S Ren J" uniqKey="S Rensen S" first="S Ren J." last="S Rensen">S Ren J. S Rensen</name>
<affiliation><nlm:aff id="aff1"></nlm:aff>
</affiliation>
</author>
</analytic>
<series><title level="j">PLoS ONE</title>
<idno type="eISSN">1932-6203</idno>
<imprint><date when="2014">2014</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en"><p>As is well known, soil is a complex ecosystem harboring the most prokaryotic biodiversity on the Earth. In recent years, the advent of high-throughput sequencing techniques has greatly facilitated the progress of soil ecological studies. However, how to effectively understand the underlying biological features of large-scale sequencing data is a new challenge. In the present study, we used 33 publicly available metagenomes from diverse soil sites (i.e. grassland, forest soil, desert, Arctic soil, and mangrove sediment) and integrated some state-of-the-art computational tools to explore the phylogenetic and functional characterizations of the microbial communities in soil. Microbial composition and metabolic potential in soils were comprehensively illustrated at the metagenomic level. A spectrum of metagenomic biomarkers containing 46 taxa and 33 metabolic modules were detected to be significantly differential that could be used as indicators to distinguish at least one of five soil communities. The co-occurrence associations between complex microbial compositions and functions were inferred by network-based approaches. Our results together with the established bioinformatic pipelines should provide a foundation for future research into the relation between soil biodiversity and ecosystem function.</p>
</div>
</front>
<back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Daniel, R" uniqKey="Daniel R">R Daniel</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Vogel, Tm" uniqKey="Vogel T">TM Vogel</name>
</author>
<author><name sortKey="Simonet, P" uniqKey="Simonet P">P Simonet</name>
</author>
<author><name sortKey="Jansson, Jk" uniqKey="Jansson J">JK Jansson</name>
</author>
<author><name sortKey="Hirsch, Pr" uniqKey="Hirsch P">PR Hirsch</name>
</author>
<author><name sortKey="Tiedje, Jm" uniqKey="Tiedje J">JM Tiedje</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Delmont, To" uniqKey="Delmont T">TO Delmont</name>
</author>
<author><name sortKey="Robe, P" uniqKey="Robe P">P Robe</name>
</author>
<author><name sortKey="Cecillon, S" uniqKey="Cecillon S">S Cecillon</name>
</author>
<author><name sortKey="Clark, Im" uniqKey="Clark I">IM Clark</name>
</author>
<author><name sortKey="Constancias, F" uniqKey="Constancias F">F Constancias</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Torsvik, V" uniqKey="Torsvik V">V Torsvik</name>
</author>
<author><name sortKey=" Vre S, L" uniqKey=" Vre S L">L Øvreås</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Henne, A" uniqKey="Henne A">A Henne</name>
</author>
<author><name sortKey="Daniel, R" uniqKey="Daniel R">R Daniel</name>
</author>
<author><name sortKey="Schmitz, Ra" uniqKey="Schmitz R">RA Schmitz</name>
</author>
<author><name sortKey="Gottschalk, G" uniqKey="Gottschalk G">G Gottschalk</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Rondon, Mr" uniqKey="Rondon M">MR Rondon</name>
</author>
<author><name sortKey="August, Pr" uniqKey="August P">PR August</name>
</author>
<author><name sortKey="Bettermann, Ad" uniqKey="Bettermann A">AD Bettermann</name>
</author>
<author><name sortKey="Brady, Sf" uniqKey="Brady S">SF Brady</name>
</author>
<author><name sortKey="Grossman, Th" uniqKey="Grossman T">TH Grossman</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Fierer, N" uniqKey="Fierer N">N Fierer</name>
</author>
<author><name sortKey="Lauber, Cl" uniqKey="Lauber C">CL Lauber</name>
</author>
<author><name sortKey="Ramirez, Ks" uniqKey="Ramirez K">KS Ramirez</name>
</author>
<author><name sortKey="Zaneveld, J" uniqKey="Zaneveld J">J Zaneveld</name>
</author>
<author><name sortKey="Bradford, Ma" uniqKey="Bradford M">MA Bradford</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Barberan, A" uniqKey="Barberan A">A Barberán</name>
</author>
<author><name sortKey="Bates, St" uniqKey="Bates S">ST Bates</name>
</author>
<author><name sortKey="Casamayor, Eo" uniqKey="Casamayor E">EO Casamayor</name>
</author>
<author><name sortKey="Fierer, N" uniqKey="Fierer N">N Fierer</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="De Angelis, Km" uniqKey="De Angelis K">KM De Angelis</name>
</author>
<author><name sortKey="Gladden, Jm" uniqKey="Gladden J">JM Gladden</name>
</author>
<author><name sortKey="Allgaier, M" uniqKey="Allgaier M">M Allgaier</name>
</author>
<author><name sortKey="Dhaeseleer, P" uniqKey="Dhaeseleer P">P Dhaeseleer</name>
</author>
<author><name sortKey="Fortney, Jl" uniqKey="Fortney J">JL Fortney</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Delmont, To" uniqKey="Delmont T">TO Delmont</name>
</author>
<author><name sortKey="Prestat, E" uniqKey="Prestat E">E Prestat</name>
</author>
<author><name sortKey="Keegan, Kp" uniqKey="Keegan K">KP Keegan</name>
</author>
<author><name sortKey="Faubladier, M" uniqKey="Faubladier M">M Faubladier</name>
</author>
<author><name sortKey="Robe, P" uniqKey="Robe P">P Robe</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Stewart, Fj" uniqKey="Stewart F">FJ Stewart</name>
</author>
<author><name sortKey="Sharma, Ak" uniqKey="Sharma A">AK Sharma</name>
</author>
<author><name sortKey="Bryant, Ja" uniqKey="Bryant J">JA Bryant</name>
</author>
<author><name sortKey="Eppley, Jm" uniqKey="Eppley J">JM Eppley</name>
</author>
<author><name sortKey="Delong, Ef" uniqKey="Delong E">EF DeLong</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Fierer, N" uniqKey="Fierer N">N Fierer</name>
</author>
<author><name sortKey="Leff, Jw" uniqKey="Leff J">JW Leff</name>
</author>
<author><name sortKey="Adams, Bj" uniqKey="Adams B">BJ Adams</name>
</author>
<author><name sortKey="Nielsen, Un" uniqKey="Nielsen U">UN Nielsen</name>
</author>
<author><name sortKey="Bates, St" uniqKey="Bates S">ST Bates</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Yergeau, E" uniqKey="Yergeau E">E Yergeau</name>
</author>
<author><name sortKey="Sanschagrin, S" uniqKey="Sanschagrin S">S Sanschagrin</name>
</author>
<author><name sortKey="Beaumier, D" uniqKey="Beaumier D">D Beaumier</name>
</author>
<author><name sortKey="Greer, Cw" uniqKey="Greer C">CW Greer</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Langille, Mg" uniqKey="Langille M">MG Langille</name>
</author>
<author><name sortKey="Zaneveld, J" uniqKey="Zaneveld J">J Zaneveld</name>
</author>
<author><name sortKey="Caporaso, Jg" uniqKey="Caporaso J">JG Caporaso</name>
</author>
<author><name sortKey="Mcdonald, D" uniqKey="Mcdonald D">D McDonald</name>
</author>
<author><name sortKey="Knights, D" uniqKey="Knights D">D Knights</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Meyer, F" uniqKey="Meyer F">F Meyer</name>
</author>
<author><name sortKey="Paarmann, D" uniqKey="Paarmann D">D Paarmann</name>
</author>
<author><name sortKey="Dsouza, M" uniqKey="Dsouza M">M DSouza</name>
</author>
<author><name sortKey="Olson, R" uniqKey="Olson R">R Olson</name>
</author>
<author><name sortKey="Glass, Em" uniqKey="Glass E">EM Glass</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Markowitz, Vm" uniqKey="Markowitz V">VM Markowitz</name>
</author>
<author><name sortKey="Chen, Im" uniqKey="Chen I">IM Chen</name>
</author>
<author><name sortKey="Chu, K" uniqKey="Chu K">K Chu</name>
</author>
<author><name sortKey="Szeto, E" uniqKey="Szeto E">E Szeto</name>
</author>
<author><name sortKey="Palaniappan, K" uniqKey="Palaniappan K">K Palaniappan</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Sun, S" uniqKey="Sun S">S Sun</name>
</author>
<author><name sortKey="Chen, J" uniqKey="Chen J">J Chen</name>
</author>
<author><name sortKey="Li, W" uniqKey="Li W">W Li</name>
</author>
<author><name sortKey="Altintas, I" uniqKey="Altintas I">I Altintas</name>
</author>
<author><name sortKey="Lin, A" uniqKey="Lin A">A Lin</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Wu, S" uniqKey="Wu S">S Wu</name>
</author>
<author><name sortKey="Zhu, Z" uniqKey="Zhu Z">Z Zhu</name>
</author>
<author><name sortKey="Fu, L" uniqKey="Fu L">L Fu</name>
</author>
<author><name sortKey="Niu, B" uniqKey="Niu B">B Niu</name>
</author>
<author><name sortKey="Li, W" uniqKey="Li W">W Li</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Gevers, D" uniqKey="Gevers D">D Gevers</name>
</author>
<author><name sortKey="Knight, R" uniqKey="Knight R">R Knight</name>
</author>
<author><name sortKey="Petrosino, Jf" uniqKey="Petrosino J">JF Petrosino</name>
</author>
<author><name sortKey="Huang, K" uniqKey="Huang K">K Huang</name>
</author>
<author><name sortKey="Mcguire, Al" uniqKey="Mcguire A">AL McGuire</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Segata, N" uniqKey="Segata N">N Segata</name>
</author>
<author><name sortKey="Boernigen, D" uniqKey="Boernigen D">D Boernigen</name>
</author>
<author><name sortKey="Tickle, Tl" uniqKey="Tickle T">TL Tickle</name>
</author>
<author><name sortKey="Morgan, Xc" uniqKey="Morgan X">XC Morgan</name>
</author>
<author><name sortKey="Garrett, Ws" uniqKey="Garrett W">WS Garrett</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Segata, N" uniqKey="Segata N">N Segata</name>
</author>
<author><name sortKey="Izard, J" uniqKey="Izard J">J Izard</name>
</author>
<author><name sortKey="Waldron, L" uniqKey="Waldron L">L Waldron</name>
</author>
<author><name sortKey="Gevers, D" uniqKey="Gevers D">D Gevers</name>
</author>
<author><name sortKey="Miropolsky, L" uniqKey="Miropolsky L">L Miropolsky</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Faust, K" uniqKey="Faust K">K Faust</name>
</author>
<author><name sortKey="Sathirapongsasuti, Jf" uniqKey="Sathirapongsasuti J">JF Sathirapongsasuti</name>
</author>
<author><name sortKey="Izard, J" uniqKey="Izard J">J Izard</name>
</author>
<author><name sortKey="Segata, N" uniqKey="Segata N">N Segata</name>
</author>
<author><name sortKey="Gevers, D" uniqKey="Gevers D">D Gevers</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Andreote, Fd" uniqKey="Andreote F">FD Andreote</name>
</author>
<author><name sortKey="Jimenez, Dj" uniqKey="Jimenez D">DJ Jiménez</name>
</author>
<author><name sortKey="Chaves, D" uniqKey="Chaves D">D Chaves</name>
</author>
<author><name sortKey="Dias, Ac" uniqKey="Dias A">AC Dias</name>
</author>
<author><name sortKey="Luvizotto, Dm" uniqKey="Luvizotto D">DM Luvizotto</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Segata, N" uniqKey="Segata N">N Segata</name>
</author>
<author><name sortKey="Waldron, L" uniqKey="Waldron L">L Waldron</name>
</author>
<author><name sortKey="Ballarini, A" uniqKey="Ballarini A">A Ballarini</name>
</author>
<author><name sortKey="Narasimhan, V" uniqKey="Narasimhan V">V Narasimhan</name>
</author>
<author><name sortKey="Jousson, O" uniqKey="Jousson O">O Jousson</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Altschul, Sf" uniqKey="Altschul S">SF Altschul</name>
</author>
<author><name sortKey="Gish, W" uniqKey="Gish W">W Gish</name>
</author>
<author><name sortKey="Miller, W" uniqKey="Miller W">W Miller</name>
</author>
<author><name sortKey="Myers, Ew" uniqKey="Myers E">EW Myers</name>
</author>
<author><name sortKey="Lipman, Dj" uniqKey="Lipman D">DJ Lipman</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Bray, Jr" uniqKey="Bray J">JR Bray</name>
</author>
<author><name sortKey="Curtis, Jt" uniqKey="Curtis J">JT Curtis</name>
</author>
</analytic>
</biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct><analytic><author><name sortKey="Abubucker, S" uniqKey="Abubucker S">S Abubucker</name>
</author>
<author><name sortKey="Segata, N" uniqKey="Segata N">N Segata</name>
</author>
<author><name sortKey="Goll, J" uniqKey="Goll J">J Goll</name>
</author>
<author><name sortKey="Schubert, Am" uniqKey="Schubert A">AM Schubert</name>
</author>
<author><name sortKey="Izard, J" uniqKey="Izard J">J Izard</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Kanehisa, M" uniqKey="Kanehisa M">M Kanehisa</name>
</author>
<author><name sortKey="Goto, S" uniqKey="Goto S">S Goto</name>
</author>
<author><name sortKey="Furumichi, M" uniqKey="Furumichi M">M Furumichi</name>
</author>
<author><name sortKey="Tanabe, M" uniqKey="Tanabe M">M Tanabe</name>
</author>
<author><name sortKey="Hirakawa, M" uniqKey="Hirakawa M">M Hirakawa</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Edgar, Rc" uniqKey="Edgar R">RC Edgar</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Ye, Y" uniqKey="Ye Y">Y Ye</name>
</author>
<author><name sortKey="Doak, Tg" uniqKey="Doak T">TG Doak</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Goecks, J" uniqKey="Goecks J">J Goecks</name>
</author>
<author><name sortKey="Nekrutenko, A" uniqKey="Nekrutenko A">A Nekrutenko</name>
</author>
<author><name sortKey="Taylor, J" uniqKey="Taylor J">J Taylor</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Sarkar, Sk" uniqKey="Sarkar S">SK Sarkar</name>
</author>
<author><name sortKey="Chang, Ck" uniqKey="Chang C">CK Chang</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Benjamini, Y" uniqKey="Benjamini Y">Y Benjamini</name>
</author>
<author><name sortKey="Hochberg, Y" uniqKey="Hochberg Y">Y Hochberg</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Smoot, Me" uniqKey="Smoot M">ME Smoot</name>
</author>
<author><name sortKey="Ono, K" uniqKey="Ono K">K Ono</name>
</author>
<author><name sortKey="Ruscheinski, J" uniqKey="Ruscheinski J">J Ruscheinski</name>
</author>
<author><name sortKey="Wang, Pl" uniqKey="Wang P">PL Wang</name>
</author>
<author><name sortKey="Ideker, T" uniqKey="Ideker T">T Ideker</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Qin, J" uniqKey="Qin J">J Qin</name>
</author>
<author><name sortKey="Li, R" uniqKey="Li R">R Li</name>
</author>
<author><name sortKey="Raes, J" uniqKey="Raes J">J Raes</name>
</author>
<author><name sortKey="Arumugam, M" uniqKey="Arumugam M">M Arumugam</name>
</author>
<author><name sortKey="Burgdorf, Ks" uniqKey="Burgdorf K">KS Burgdorf</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Segata, N" uniqKey="Segata N">N Segata</name>
</author>
<author><name sortKey="Haake, Sk" uniqKey="Haake S">SK Haake</name>
</author>
<author><name sortKey="Mannon, P" uniqKey="Mannon P">P Mannon</name>
</author>
<author><name sortKey="Lemon, Kp" uniqKey="Lemon K">KP Lemon</name>
</author>
<author><name sortKey="Waldron, L" uniqKey="Waldron L">L Waldron</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Janssen, Ph" uniqKey="Janssen P">PH Janssen</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Dedysh, Sn" uniqKey="Dedysh S">SN Dedysh</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Dedysh, Sn" uniqKey="Dedysh S">SN Dedysh</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Ojima, Ds" uniqKey="Ojima D">DS Ojima</name>
</author>
<author><name sortKey="Valentine, Dw" uniqKey="Valentine D">DW Valentine</name>
</author>
<author><name sortKey="Mosier, Ar" uniqKey="Mosier A">AR Mosier</name>
</author>
<author><name sortKey="Parton, Wj" uniqKey="Parton W">WJ Parton</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Jang, I" uniqKey="Jang I">I Jang</name>
</author>
<author><name sortKey="Lee, S" uniqKey="Lee S">S Lee</name>
</author>
<author><name sortKey="Hong, Jh" uniqKey="Hong J">JH Hong</name>
</author>
<author><name sortKey="Kang, H" uniqKey="Kang H">H Kang</name>
</author>
</analytic>
</biblStruct>
<biblStruct></biblStruct>
<biblStruct></biblStruct>
<biblStruct><analytic><author><name sortKey="Lau, E" uniqKey="Lau E">E Lau</name>
</author>
<author><name sortKey="Fisher, Mc" uniqKey="Fisher M">MC Fisher</name>
</author>
<author><name sortKey="Steudler, Pa" uniqKey="Steudler P">PA Steudler</name>
</author>
<author><name sortKey="Cavanaugh, Cm" uniqKey="Cavanaugh C">CM Cavanaugh</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Mulkidjanian, Ay" uniqKey="Mulkidjanian A">AY Mulkidjanian</name>
</author>
<author><name sortKey="Koonin, Ev" uniqKey="Koonin E">EV Koonin</name>
</author>
<author><name sortKey="Makarova, Ks" uniqKey="Makarova K">KS Makarova</name>
</author>
<author><name sortKey="Mekhedov, Sl" uniqKey="Mekhedov S">SL Mekhedov</name>
</author>
<author><name sortKey="Sorokin, A" uniqKey="Sorokin A">A Sorokin</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Empadinhas, N" uniqKey="Empadinhas N">N Empadinhas</name>
</author>
<author><name sortKey="Da Costa, Ms" uniqKey="Da Costa M">MS da Costa</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Kaneko, T" uniqKey="Kaneko T">T Kaneko</name>
</author>
<author><name sortKey="Nakamura, Y" uniqKey="Nakamura Y">Y Nakamura</name>
</author>
<author><name sortKey="Sato, S" uniqKey="Sato S">S Sato</name>
</author>
<author><name sortKey="Minamisawa, K" uniqKey="Minamisawa K">K Minamisawa</name>
</author>
<author><name sortKey="Uchiumi, T" uniqKey="Uchiumi T">T Uchiumi</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Desrosiers, Dc" uniqKey="Desrosiers D">DC Desrosiers</name>
</author>
<author><name sortKey="Sun, Yc" uniqKey="Sun Y">YC Sun</name>
</author>
<author><name sortKey="Zaidi, Aa" uniqKey="Zaidi A">AA Zaidi</name>
</author>
<author><name sortKey="Eggers, Ch" uniqKey="Eggers C">CH Eggers</name>
</author>
<author><name sortKey="Cox, Dl" uniqKey="Cox D">DL Cox</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Wolosiuk, Ra" uniqKey="Wolosiuk R">RA Wolosiuk</name>
</author>
<author><name sortKey="Ballicora, Ma" uniqKey="Ballicora M">MA Ballicora</name>
</author>
<author><name sortKey="Hagelin, K" uniqKey="Hagelin K">K Hagelin</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Maloney, Gs" uniqKey="Maloney G">GS Maloney</name>
</author>
<author><name sortKey="Kochevenko, A" uniqKey="Kochevenko A">A Kochevenko</name>
</author>
<author><name sortKey="Tieman, Dm" uniqKey="Tieman D">DM Tieman</name>
</author>
<author><name sortKey="Tohge, T" uniqKey="Tohge T">T Tohge</name>
</author>
<author><name sortKey="Krieger, U" uniqKey="Krieger U">U Krieger</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Maeda, H" uniqKey="Maeda H">H Maeda</name>
</author>
<author><name sortKey="Dudareva, N" uniqKey="Dudareva N">N Dudareva</name>
</author>
</analytic>
</biblStruct>
</listBibl>
</div1>
</back>
</TEI>
<affiliations><list></list>
<tree><noCountry><name sortKey="Hansen, Lars H" sort="Hansen, Lars H" uniqKey="Hansen L" first="Lars H." last="Hansen">Lars H. Hansen</name>
<name sortKey="Hansen, Martin Asser" sort="Hansen, Martin Asser" uniqKey="Hansen M" first="Martin Asser" last="Hansen">Martin Asser Hansen</name>
<name sortKey="Jacquiod, Samuel" sort="Jacquiod, Samuel" uniqKey="Jacquiod S" first="Samuel" last="Jacquiod">Samuel Jacquiod</name>
<name sortKey="S Rensen, S Ren J" sort="S Rensen, S Ren J" uniqKey="S Rensen S" first="S Ren J." last="S Rensen">S Ren J. S Rensen</name>
<name sortKey="Xu, Zhuofei" sort="Xu, Zhuofei" uniqKey="Xu Z" first="Zhuofei" last="Xu">Zhuofei Xu</name>
</noCountry>
</tree>
</affiliations>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Ticri/CIDE/explor/CyberinfraV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000242 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000242 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Ticri/CIDE |area= CyberinfraV1 |flux= Main |étape= Exploration |type= RBID |clé= PMC:3972102 |texte= Bioinformatic Approaches Reveal Metagenomic Characterization of Soil Microbial Community }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:24691166" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \ | NlmPubMed2Wicri -a CyberinfraV1
![]() | This area was generated with Dilib version V0.6.25. | ![]() |