Enriched biodiversity data as a resource and service
Identifieur interne : 000252 ( Ncbi/Curation ); précédent : 000251; suivant : 000253Enriched biodiversity data as a resource and service
Auteurs : Rutger Aldo Vos [Pays-Bas] ; Jordan Valkov Biserkov [Bulgarie] ; Bachir Balech [Italie] ; Niall Beard [Royaume-Uni] ; Matthew Blissett [Royaume-Uni] ; Christian Brenninkmeijer [Royaume-Uni] ; Tom Van Dooren [Pays-Bas] ; David Eades [États-Unis] ; George Gosline [Royaume-Uni] ; Quentin John Groom [Belgique] ; Thomas D. Hamann [Pays-Bas] ; Hannes Hettling [Pays-Bas] ; Robert Hoehndorf [Royaume-Uni] ; Ayco Holleman [Pays-Bas] ; Peter Hovenkamp [Pays-Bas] ; Patricia Kelbert [Allemagne] ; David King [Royaume-Uni] ; Don Kirkup [Royaume-Uni] ; Youri Lammers [Pays-Bas] ; Thibaut Demeulemeester [Pays-Bas] ; Daniel Mietchen [Allemagne] ; Jeremy A. Miller [Pays-Bas] ; Ross Mounce [Royaume-Uni] ; Nicola Nicolson [Royaume-Uni] ; Rod Page [Royaume-Uni] ; Aleksandra Pawlik [Royaume-Uni] ; Serrano Pereira [Pays-Bas] ; Lyubomir Penev [Bulgarie] ; Kevin Richards [Nouvelle-Zélande] ; Guido Sautter [Suisse] ; David Peter Shorthouse [Canada] ; Marko T Htinen [Finlande] ; Claus Weiland [Allemagne] ; Alan R. Williams [Royaume-Uni] ; Soraya Sierra [Pays-Bas]Source :
- Biodiversity Data Journal [ 1314-2836 ] ; 2014.
Abstract
One goal of the meeting was to facilitate re-use and enhancement of biodiversity knowledge by a broad range of stakeholders, such as taxonomists, systematists, ecologists, niche modelers, informaticians and ontologists. The suggested use cases resulted in nine breakout groups addressing three main themes: i) mobilising heritage biodiversity knowledge; ii) formalising and linking concepts; and iii) addressing interoperability between service platforms. Another goal was to further foster a community of experts in biodiversity informatics and to build human links between research projects and institutions, in response to recent calls to further such integration in this research domain.
Url:
DOI: 10.3897/BDJ.2.e1125
PubMed: 25057255
PubMed Central: 4092319
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PMC:4092319Le document en format XML
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<author><name sortKey="Weiland, Claus" sort="Weiland, Claus" uniqKey="Weiland C" first="Claus" last="Weiland">Claus Weiland</name>
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<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Enriched biodiversity data as a resource and service</title>
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</affiliation>
</author>
<author><name sortKey="Biserkov, Jordan Valkov" sort="Biserkov, Jordan Valkov" uniqKey="Biserkov J" first="Jordan Valkov" last="Biserkov">Jordan Valkov Biserkov</name>
<affiliation wicri:level="3"><nlm:aff id="A2"><addr-line>Pensoft Publishers, Sofia, Bulgaria</addr-line>
</nlm:aff>
<country xml:lang="fr">Bulgarie</country>
<wicri:regionArea>Pensoft Publishers, Sofia</wicri:regionArea>
<placeName><settlement type="city">Sofia</settlement>
<region nuts="2">Sofia-ville (oblast)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Balech, Bachir" sort="Balech, Bachir" uniqKey="Balech B" first="Bachir" last="Balech">Bachir Balech</name>
<affiliation wicri:level="1"><nlm:aff id="A3"><addr-line>Institute of Biomembranes and Bioenergetics, National Research Council, Bari, Italy</addr-line>
</nlm:aff>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Institute of Biomembranes and Bioenergetics, National Research Council, Bari</wicri:regionArea>
<wicri:noRegion>Bari</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Beard, Niall" sort="Beard, Niall" uniqKey="Beard N" first="Niall" last="Beard">Niall Beard</name>
<affiliation wicri:level="4"><nlm:aff id="A4"><addr-line>University of Manchester, Manchester, United Kingdom</addr-line>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>University of Manchester, Manchester</wicri:regionArea>
<placeName><settlement type="city">Manchester</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Manchester</region>
</placeName>
<orgName type="university">Université de Manchester</orgName>
</affiliation>
</author>
<author><name sortKey="Blissett, Matthew" sort="Blissett, Matthew" uniqKey="Blissett M" first="Matthew" last="Blissett">Matthew Blissett</name>
<affiliation wicri:level="1"><nlm:aff id="A5"><addr-line>Royal Botanic Gardens, Kew, United Kingdom</addr-line>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Royal Botanic Gardens, Kew</wicri:regionArea>
<wicri:noRegion>Kew</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Brenninkmeijer, Christian" sort="Brenninkmeijer, Christian" uniqKey="Brenninkmeijer C" first="Christian" last="Brenninkmeijer">Christian Brenninkmeijer</name>
<affiliation wicri:level="4"><nlm:aff id="A4"><addr-line>University of Manchester, Manchester, United Kingdom</addr-line>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>University of Manchester, Manchester</wicri:regionArea>
<placeName><settlement type="city">Manchester</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Manchester</region>
</placeName>
<orgName type="university">Université de Manchester</orgName>
</affiliation>
</author>
<author><name sortKey="Van Dooren, Tom" sort="Van Dooren, Tom" uniqKey="Van Dooren T" first="Tom" last="Van Dooren">Tom Van Dooren</name>
<affiliation wicri:level="3"><nlm:aff id="A1"><addr-line>Naturalis Biodiversity Center, Leiden, Netherlands</addr-line>
</nlm:aff>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Naturalis Biodiversity Center, Leiden</wicri:regionArea>
<placeName><settlement type="city">Leyde</settlement>
<region nuts="2" type="province">Hollande-Méridionale</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Eades, David" sort="Eades, David" uniqKey="Eades D" first="David" last="Eades">David Eades</name>
<affiliation wicri:level="1"><nlm:aff id="A6"><addr-line>The Illinois Natural History Survey, Champaign, United States of America</addr-line>
</nlm:aff>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>The Illinois Natural History Survey, Champaign</wicri:regionArea>
<wicri:noRegion>Champaign</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Gosline, George" sort="Gosline, George" uniqKey="Gosline G" first="George" last="Gosline">George Gosline</name>
<affiliation wicri:level="1"><nlm:aff id="A5"><addr-line>Royal Botanic Gardens, Kew, United Kingdom</addr-line>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Royal Botanic Gardens, Kew</wicri:regionArea>
<wicri:noRegion>Kew</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Groom, Quentin John" sort="Groom, Quentin John" uniqKey="Groom Q" first="Quentin John" last="Groom">Quentin John Groom</name>
<affiliation wicri:level="1"><nlm:aff id="A7"><addr-line>Agentschap Plantentuin Meise, Meise, Belgium</addr-line>
</nlm:aff>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Agentschap Plantentuin Meise, Meise</wicri:regionArea>
<wicri:noRegion>Meise</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Hamann, Thomas D" sort="Hamann, Thomas D" uniqKey="Hamann T" first="Thomas D." last="Hamann">Thomas D. Hamann</name>
<affiliation wicri:level="3"><nlm:aff id="A1"><addr-line>Naturalis Biodiversity Center, Leiden, Netherlands</addr-line>
</nlm:aff>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Naturalis Biodiversity Center, Leiden</wicri:regionArea>
<placeName><settlement type="city">Leyde</settlement>
<region nuts="2" type="province">Hollande-Méridionale</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Hettling, Hannes" sort="Hettling, Hannes" uniqKey="Hettling H" first="Hannes" last="Hettling">Hannes Hettling</name>
<affiliation wicri:level="3"><nlm:aff id="A1"><addr-line>Naturalis Biodiversity Center, Leiden, Netherlands</addr-line>
</nlm:aff>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Naturalis Biodiversity Center, Leiden</wicri:regionArea>
<placeName><settlement type="city">Leyde</settlement>
<region nuts="2" type="province">Hollande-Méridionale</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Hoehndorf, Robert" sort="Hoehndorf, Robert" uniqKey="Hoehndorf R" first="Robert" last="Hoehndorf">Robert Hoehndorf</name>
<affiliation wicri:level="1"><nlm:aff id="A8"><addr-line>Aberystwyth University, Aberystwyth, United Kingdom</addr-line>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Aberystwyth University, Aberystwyth</wicri:regionArea>
<wicri:noRegion>Aberystwyth</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Holleman, Ayco" sort="Holleman, Ayco" uniqKey="Holleman A" first="Ayco" last="Holleman">Ayco Holleman</name>
<affiliation wicri:level="3"><nlm:aff id="A1"><addr-line>Naturalis Biodiversity Center, Leiden, Netherlands</addr-line>
</nlm:aff>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Naturalis Biodiversity Center, Leiden</wicri:regionArea>
<placeName><settlement type="city">Leyde</settlement>
<region nuts="2" type="province">Hollande-Méridionale</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Hovenkamp, Peter" sort="Hovenkamp, Peter" uniqKey="Hovenkamp P" first="Peter" last="Hovenkamp">Peter Hovenkamp</name>
<affiliation wicri:level="3"><nlm:aff id="A1"><addr-line>Naturalis Biodiversity Center, Leiden, Netherlands</addr-line>
</nlm:aff>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Naturalis Biodiversity Center, Leiden</wicri:regionArea>
<placeName><settlement type="city">Leyde</settlement>
<region nuts="2" type="province">Hollande-Méridionale</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Kelbert, Patricia" sort="Kelbert, Patricia" uniqKey="Kelbert P" first="Patricia" last="Kelbert">Patricia Kelbert</name>
<affiliation wicri:level="3"><nlm:aff id="A9"><addr-line>Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universität Berlin, Berlin, Germany</addr-line>
</nlm:aff>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universität Berlin, Berlin</wicri:regionArea>
<placeName><region type="land" nuts="3">Berlin</region>
<settlement type="city">Berlin</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="King, David" sort="King, David" uniqKey="King D" first="David" last="King">David King</name>
<affiliation wicri:level="1"><nlm:aff id="A10"><addr-line>The Open University, Milton Keynes, United Kingdom</addr-line>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>The Open University, Milton Keynes</wicri:regionArea>
<wicri:noRegion>Milton Keynes</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Kirkup, Don" sort="Kirkup, Don" uniqKey="Kirkup D" first="Don" last="Kirkup">Don Kirkup</name>
<affiliation wicri:level="1"><nlm:aff id="A5"><addr-line>Royal Botanic Gardens, Kew, United Kingdom</addr-line>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Royal Botanic Gardens, Kew</wicri:regionArea>
<wicri:noRegion>Kew</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Lammers, Youri" sort="Lammers, Youri" uniqKey="Lammers Y" first="Youri" last="Lammers">Youri Lammers</name>
<affiliation wicri:level="3"><nlm:aff id="A1"><addr-line>Naturalis Biodiversity Center, Leiden, Netherlands</addr-line>
</nlm:aff>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Naturalis Biodiversity Center, Leiden</wicri:regionArea>
<placeName><settlement type="city">Leyde</settlement>
<region nuts="2" type="province">Hollande-Méridionale</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Demeulemeester, Thibaut" sort="Demeulemeester, Thibaut" uniqKey="Demeulemeester T" first="Thibaut" last="Demeulemeester">Thibaut Demeulemeester</name>
<affiliation wicri:level="3"><nlm:aff id="A1"><addr-line>Naturalis Biodiversity Center, Leiden, Netherlands</addr-line>
</nlm:aff>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Naturalis Biodiversity Center, Leiden</wicri:regionArea>
<placeName><settlement type="city">Leyde</settlement>
<region nuts="2" type="province">Hollande-Méridionale</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Mietchen, Daniel" sort="Mietchen, Daniel" uniqKey="Mietchen D" first="Daniel" last="Mietchen">Daniel Mietchen</name>
<affiliation wicri:level="3"><nlm:aff id="A11"><addr-line>Museum für Naturkunde, Berlin, Germany</addr-line>
</nlm:aff>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Museum für Naturkunde, Berlin</wicri:regionArea>
<placeName><region type="land" nuts="3">Berlin</region>
<settlement type="city">Berlin</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="Miller, Jeremy A" sort="Miller, Jeremy A" uniqKey="Miller J" first="Jeremy A." last="Miller">Jeremy A. Miller</name>
<affiliation wicri:level="3"><nlm:aff id="A1"><addr-line>Naturalis Biodiversity Center, Leiden, Netherlands</addr-line>
</nlm:aff>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Naturalis Biodiversity Center, Leiden</wicri:regionArea>
<placeName><settlement type="city">Leyde</settlement>
<region nuts="2" type="province">Hollande-Méridionale</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Mounce, Ross" sort="Mounce, Ross" uniqKey="Mounce R" first="Ross" last="Mounce">Ross Mounce</name>
<affiliation wicri:level="1"><nlm:aff id="A12"><addr-line>University of Bath, Bath, United Kingdom</addr-line>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>University of Bath, Bath</wicri:regionArea>
<wicri:noRegion>Bath</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Nicolson, Nicola" sort="Nicolson, Nicola" uniqKey="Nicolson N" first="Nicola" last="Nicolson">Nicola Nicolson</name>
<affiliation wicri:level="1"><nlm:aff id="A5"><addr-line>Royal Botanic Gardens, Kew, United Kingdom</addr-line>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Royal Botanic Gardens, Kew</wicri:regionArea>
<wicri:noRegion>Kew</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Page, Rod" sort="Page, Rod" uniqKey="Page R" first="Rod" last="Page">Rod Page</name>
<affiliation wicri:level="4"><nlm:aff id="A13"><addr-line>University Of Glasgow, Glasgow, United Kingdom</addr-line>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>University Of Glasgow, Glasgow</wicri:regionArea>
<orgName type="university">Université de Glasgow</orgName>
<placeName><settlement type="city">Glasgow</settlement>
<region type="country">Écosse</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Pawlik, Aleksandra" sort="Pawlik, Aleksandra" uniqKey="Pawlik A" first="Aleksandra" last="Pawlik">Aleksandra Pawlik</name>
<affiliation wicri:level="3"><nlm:aff id="A14"><addr-line>Software Sustainability Institute, Manchester, United Kingdom</addr-line>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Software Sustainability Institute, Manchester</wicri:regionArea>
<placeName><settlement type="city">Manchester</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Manchester</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Pereira, Serrano" sort="Pereira, Serrano" uniqKey="Pereira S" first="Serrano" last="Pereira">Serrano Pereira</name>
<affiliation wicri:level="3"><nlm:aff id="A1"><addr-line>Naturalis Biodiversity Center, Leiden, Netherlands</addr-line>
</nlm:aff>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Naturalis Biodiversity Center, Leiden</wicri:regionArea>
<placeName><settlement type="city">Leyde</settlement>
<region nuts="2" type="province">Hollande-Méridionale</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Penev, Lyubomir" sort="Penev, Lyubomir" uniqKey="Penev L" first="Lyubomir" last="Penev">Lyubomir Penev</name>
<affiliation wicri:level="3"><nlm:aff id="A2"><addr-line>Pensoft Publishers, Sofia, Bulgaria</addr-line>
</nlm:aff>
<country xml:lang="fr">Bulgarie</country>
<wicri:regionArea>Pensoft Publishers, Sofia</wicri:regionArea>
<placeName><settlement type="city">Sofia</settlement>
<region nuts="2">Sofia-ville (oblast)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Richards, Kevin" sort="Richards, Kevin" uniqKey="Richards K" first="Kevin" last="Richards">Kevin Richards</name>
<affiliation wicri:level="1"><nlm:aff id="A15"><addr-line>Biodiversity Informatics Consultant, Christchurch, New Zealand</addr-line>
</nlm:aff>
<country xml:lang="fr">Nouvelle-Zélande</country>
<wicri:regionArea>Biodiversity Informatics Consultant, Christchurch</wicri:regionArea>
<wicri:noRegion>Christchurch</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Sautter, Guido" sort="Sautter, Guido" uniqKey="Sautter G" first="Guido" last="Sautter">Guido Sautter</name>
<affiliation wicri:level="3"><nlm:aff id="A16"><addr-line>Plazi, Bern, Switzerland</addr-line>
</nlm:aff>
<country xml:lang="fr">Suisse</country>
<wicri:regionArea>Plazi, Bern</wicri:regionArea>
<placeName><settlement type="city">Berne</settlement>
<region type="région" nuts="3">Canton de Berne</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Shorthouse, David Peter" sort="Shorthouse, David Peter" uniqKey="Shorthouse D" first="David Peter" last="Shorthouse">David Peter Shorthouse</name>
<affiliation wicri:level="3"><nlm:aff id="A17"><addr-line>Université de Montréal Biodiversity Centre, Montréal, Canada</addr-line>
</nlm:aff>
<country xml:lang="fr">Canada</country>
<wicri:regionArea>Université de Montréal Biodiversity Centre, Montréal</wicri:regionArea>
<placeName><settlement type="city">Montréal</settlement>
<region type="state">Québec</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="T Htinen, Marko" sort="T Htinen, Marko" uniqKey="T Htinen M" first="Marko" last="T Htinen">Marko T Htinen</name>
<affiliation wicri:level="1"><nlm:aff id="A18"><addr-line>University of Eastern Finland, Espoo, Finland</addr-line>
</nlm:aff>
<country xml:lang="fr">Finlande</country>
<wicri:regionArea>University of Eastern Finland, Espoo</wicri:regionArea>
<wicri:noRegion>Espoo</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Weiland, Claus" sort="Weiland, Claus" uniqKey="Weiland C" first="Claus" last="Weiland">Claus Weiland</name>
<affiliation wicri:level="1"><nlm:aff id="A19"><addr-line>Biodiversity and Climate Research Centre, Senckenberg Gesellschaft für Naturforschung, Frankfurt, Germany</addr-line>
</nlm:aff>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Biodiversity and Climate Research Centre, Senckenberg Gesellschaft für Naturforschung, Frankfurt</wicri:regionArea>
<wicri:noRegion>Frankfurt</wicri:noRegion>
<wicri:noRegion>Frankfurt</wicri:noRegion>
<wicri:noRegion>Frankfurt</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Williams, Alan R" sort="Williams, Alan R" uniqKey="Williams A" first="Alan R." last="Williams">Alan R. Williams</name>
<affiliation wicri:level="4"><nlm:aff id="A4"><addr-line>University of Manchester, Manchester, United Kingdom</addr-line>
</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>University of Manchester, Manchester</wicri:regionArea>
<placeName><settlement type="city">Manchester</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Manchester</region>
</placeName>
<orgName type="university">Université de Manchester</orgName>
</affiliation>
</author>
<author><name sortKey="Sierra, Soraya" sort="Sierra, Soraya" uniqKey="Sierra S" first="Soraya" last="Sierra">Soraya Sierra</name>
<affiliation wicri:level="3"><nlm:aff id="A1"><addr-line>Naturalis Biodiversity Center, Leiden, Netherlands</addr-line>
</nlm:aff>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Naturalis Biodiversity Center, Leiden</wicri:regionArea>
<placeName><settlement type="city">Leyde</settlement>
<region nuts="2" type="province">Hollande-Méridionale</region>
</placeName>
</affiliation>
</author>
</analytic>
<series><title level="j">Biodiversity Data Journal</title>
<idno type="ISSN">1314-2836</idno>
<idno type="eISSN">1314-2828</idno>
<imprint><date when="2014">2014</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en"><label>Abstract</label>
<p><bold>Background:</bold>
Recent years have seen a surge in projects that produce large volumes of structured, machine-readable biodiversity data. To make these data amenable to processing by generic, open source “data enrichment” workflows, they are increasingly being represented in a variety of standards-compliant interchange formats. Here, we report on an initiative in which software developers and taxonomists came together to address the challenges and highlight the opportunities in the enrichment of such biodiversity data by engaging in intensive, collaborative software development: The Biodiversity Data Enrichment Hackathon.</p>
<p><bold>Results:</bold>
The hackathon brought together 37 participants (including developers and taxonomists, i.e. scientific professionals that gather, identify, name and classify species) from 10 countries: Belgium, Bulgaria, Canada, Finland, Germany, Italy, the Netherlands, New Zealand, the UK, and the US. The participants brought expertise in processing structured data, text mining, development of ontologies, digital identification keys, geographic information systems, niche modeling, natural language processing, provenance annotation, semantic integration, taxonomic name resolution, web service interfaces, workflow tools and visualisation. Most use cases and exemplar data were provided by taxonomists.</p>
<p>One goal of the meeting was to facilitate re-use and enhancement of biodiversity knowledge by a broad range of stakeholders, such as taxonomists, systematists, ecologists, niche modelers, informaticians and ontologists. The suggested use cases resulted in nine breakout groups addressing three main themes: i) mobilising heritage biodiversity knowledge; ii) formalising and linking concepts; and iii) addressing interoperability between service platforms. Another goal was to further foster a community of experts in biodiversity informatics and to build human links between research projects and institutions, in response to recent calls to further such integration in this research domain.</p>
<p><bold>Conclusions:</bold>
Beyond deriving prototype solutions for each use case, areas of inadequacy were discussed and are being pursued further. It was striking how many possible applications for biodiversity data there were and how quickly solutions could be put together when the normal constraints to collaboration were broken down for a week. Conversely, mobilising biodiversity knowledge from their silos in heritage literature and natural history collections will continue to require formalisation of the concepts (and the links between them) that define the research domain, as well as increased interoperability between the software platforms that operate on these concepts.</p>
</div>
</front>
<back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Agosti, Donat" uniqKey="Agosti D">Donat Agosti</name>
</author>
<author><name sortKey="Egloff, Willi" uniqKey="Egloff W">Willi Egloff</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Agosti, D" uniqKey="Agosti D">D. Agosti</name>
</author>
<author><name sortKey="Barker, C" uniqKey="Barker C">C. Barker</name>
</author>
<author><name sortKey="Catapano, T" uniqKey="Catapano T">T. Catapano</name>
</author>
<author><name sortKey="Cui, H" uniqKey="Cui H">H. Cui</name>
</author>
<author><name sortKey="Eckert, S" uniqKey="Eckert S">S. Eckert</name>
</author>
<author><name sortKey="Bisrekov, J" uniqKey="Bisrekov J">J. Bisrekov</name>
</author>
<author><name sortKey="Georgiev, T" uniqKey="Georgiev T">T. Georgiev</name>
</author>
<author><name sortKey="Groom, Q" uniqKey="Groom Q">Q. Groom</name>
</author>
<author><name sortKey="Guntsch, A" uniqKey="Guntsch A">A. Güntsch</name>
</author>
<author><name sortKey="Hagedorn, G" uniqKey="Hagedorn G">G. Hagedorn</name>
</author>
<author><name sortKey="Hamann, T" uniqKey="Hamann T">T. Hamann</name>
</author>
<author><name sortKey="Hovenkamp, P" uniqKey="Hovenkamp P">P. Hovenkamp</name>
</author>
<author><name sortKey="Kelbert, P" uniqKey="Kelbert P">P. Kelbert</name>
</author>
<author><name sortKey="Kirk, P" uniqKey="Kirk P">P. Kirk</name>
</author>
<author><name sortKey="Kirkup, Don" uniqKey="Kirkup D">Don Kirkup</name>
</author>
<author><name sortKey="Miller, J" uniqKey="Miller J">J. Miller</name>
</author>
<author><name sortKey="Morris, R" uniqKey="Morris R">R. Morris</name>
</author>
<author><name sortKey="Muller, A" uniqKey="Muller A">A. Müller</name>
</author>
<author><name sortKey="Oliveira, S Mota De" uniqKey="Oliveira S">S. Mota de Oliveira</name>
</author>
<author><name sortKey="Penev, L" uniqKey="Penev L">L. Penev</name>
</author>
<author><name sortKey="Sierra, S" uniqKey="Sierra S">S. Sierra</name>
</author>
<author><name sortKey="Walduck, T" uniqKey="Walduck T">T. Walduck</name>
</author>
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