Quorumpeps database: chemical space, microbial origin and functionality of quorum sensing peptides
Identifieur interne : 000746 ( Main/Exploration ); précédent : 000745; suivant : 000747Quorumpeps database: chemical space, microbial origin and functionality of quorum sensing peptides
Auteurs : Evelien Wynendaele ; Antoon Bronselaer ; Joachim Nielandt ; Matthias D Ondt ; Sofie Stalmans ; Nathalie Bracke ; Frederick Verbeke ; Christophe Van De Wiele [Belgique] ; Guy De Tré ; Bart De SpiegeleerSource :
- Nucleic Acids Research [ 0305-1048 ] ; 2012.
Abstract
Quorum-sensing (QS) peptides are biologically attractive molecules, with a wide diversity of structures and prone to modifications altering or presenting new functionalities. Therefore, the Quorumpeps database (
Url:
DOI: 10.1093/nar/gks1137
PubMed: 23180797
PubMed Central: 3531179
Affiliations:
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Quorumpeps database: chemical space, microbial origin and functionality of quorum sensing peptides</title><author><name sortKey="Wynendaele, Evelien" sort="Wynendaele, Evelien" uniqKey="Wynendaele E" first="Evelien" last="Wynendaele">Evelien Wynendaele</name><affiliation><nlm:aff id="gks1137-AFF1">Drug Quality and Registration (DruQuaR) group, Department of Pharmaceutical Analysis, Faculty of Pharmaceutical Sciences,</nlm:aff><wicri:noCountry code="subfield">Faculty of Pharmaceutical Sciences</wicri:noCountry></affiliation></author><author><name sortKey="Bronselaer, Antoon" sort="Bronselaer, Antoon" uniqKey="Bronselaer A" first="Antoon" last="Bronselaer">Antoon Bronselaer</name><affiliation><nlm:aff wicri:cut=" and" id="gks1137-AFF1">Department of Telecommunications and Information Processing, Faculty of Engineering and Architecture</nlm:aff><wicri:noCountry code="subfield">Faculty of Engineering and Architecture</wicri:noCountry></affiliation></author><author><name sortKey="Nielandt, Joachim" sort="Nielandt, Joachim" uniqKey="Nielandt J" first="Joachim" last="Nielandt">Joachim Nielandt</name><affiliation><nlm:aff wicri:cut=" and" id="gks1137-AFF1">Department of Telecommunications and Information Processing, Faculty of Engineering and Architecture</nlm:aff><wicri:noCountry code="subfield">Faculty of Engineering and Architecture</wicri:noCountry></affiliation></author><author><name sortKey="D Ondt, Matthias" sort="D Ondt, Matthias" uniqKey="D Ondt M" first="Matthias" last="D Ondt">Matthias D Ondt</name><affiliation><nlm:aff id="gks1137-AFF1">Drug Quality and Registration (DruQuaR) group, Department of Pharmaceutical Analysis, Faculty of Pharmaceutical Sciences,</nlm:aff><wicri:noCountry code="subfield">Faculty of Pharmaceutical Sciences</wicri:noCountry></affiliation></author><author><name sortKey="Stalmans, Sofie" sort="Stalmans, Sofie" uniqKey="Stalmans S" first="Sofie" last="Stalmans">Sofie Stalmans</name><affiliation><nlm:aff id="gks1137-AFF1">Drug Quality and Registration (DruQuaR) group, Department of Pharmaceutical Analysis, Faculty of Pharmaceutical Sciences,</nlm:aff><wicri:noCountry code="subfield">Faculty of Pharmaceutical Sciences</wicri:noCountry></affiliation></author><author><name sortKey="Bracke, Nathalie" sort="Bracke, Nathalie" uniqKey="Bracke N" first="Nathalie" last="Bracke">Nathalie Bracke</name><affiliation><nlm:aff id="gks1137-AFF1">Drug Quality and Registration (DruQuaR) group, Department of Pharmaceutical Analysis, Faculty of Pharmaceutical Sciences,</nlm:aff><wicri:noCountry code="subfield">Faculty of Pharmaceutical Sciences</wicri:noCountry></affiliation></author><author><name sortKey="Verbeke, Frederick" sort="Verbeke, Frederick" uniqKey="Verbeke F" first="Frederick" last="Verbeke">Frederick Verbeke</name><affiliation><nlm:aff id="gks1137-AFF1">Drug Quality and Registration (DruQuaR) group, Department of Pharmaceutical Analysis, Faculty of Pharmaceutical Sciences,</nlm:aff><wicri:noCountry code="subfield">Faculty of Pharmaceutical Sciences</wicri:noCountry></affiliation></author><author><name sortKey="Van De Wiele, Christophe" sort="Van De Wiele, Christophe" uniqKey="Van De Wiele C" first="Christophe" last="Van De Wiele">Christophe Van De Wiele</name><affiliation wicri:level="1"><nlm:aff id="gks1137-AFF1">Department of Radiotherapy and Nuclear Medicine, Faculty of Medicine and Health Sciences, Ghent Hospital University, Ghent B-9000, Belgium</nlm:aff><country xml:lang="fr">Belgique</country><wicri:regionArea>Department of Radiotherapy and Nuclear Medicine, Faculty of Medicine and Health Sciences, Ghent Hospital University, Ghent B-9000</wicri:regionArea><wicri:noRegion>Ghent B-9000</wicri:noRegion></affiliation></author><author><name sortKey="De Tre, Guy" sort="De Tre, Guy" uniqKey="De Tre G" first="Guy" last="De Tré">Guy De Tré</name><affiliation><nlm:aff wicri:cut=" and" id="gks1137-AFF1">Department of Telecommunications and Information Processing, Faculty of Engineering and Architecture</nlm:aff><wicri:noCountry code="subfield">Faculty of Engineering and Architecture</wicri:noCountry></affiliation></author><author><name sortKey="De Spiegeleer, Bart" sort="De Spiegeleer, Bart" uniqKey="De Spiegeleer B" first="Bart" last="De Spiegeleer">Bart De Spiegeleer</name><affiliation><nlm:aff id="gks1137-AFF1">Drug Quality and Registration (DruQuaR) group, Department of Pharmaceutical Analysis, Faculty of Pharmaceutical Sciences,</nlm:aff><wicri:noCountry code="subfield">Faculty of Pharmaceutical Sciences</wicri:noCountry></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">23180797</idno><idno type="pmc">3531179</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531179</idno><idno type="RBID">PMC:3531179</idno><idno type="doi">10.1093/nar/gks1137</idno><date when="2012">2012</date><idno type="wicri:Area/Pmc/Corpus">000407</idno><idno type="wicri:Area/Pmc/Curation">000407</idno><idno type="wicri:Area/Pmc/Checkpoint">000306</idno><idno type="wicri:Area/Ncbi/Merge">000157</idno><idno type="wicri:Area/Ncbi/Curation">000157</idno><idno type="wicri:Area/Ncbi/Checkpoint">000157</idno><idno type="wicri:doubleKey">0305-1048:2012:Wynendaele E:quorumpeps:database:chemical</idno><idno type="wicri:Area/Main/Merge">000747</idno><idno type="wicri:Area/Main/Curation">000746</idno><idno type="wicri:Area/Main/Exploration">000746</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Quorumpeps database: chemical space, microbial origin and functionality of quorum sensing peptides</title><author><name sortKey="Wynendaele, Evelien" sort="Wynendaele, Evelien" uniqKey="Wynendaele E" first="Evelien" last="Wynendaele">Evelien Wynendaele</name><affiliation><nlm:aff id="gks1137-AFF1">Drug Quality and Registration (DruQuaR) group, Department of Pharmaceutical Analysis, Faculty of Pharmaceutical Sciences,</nlm:aff><wicri:noCountry code="subfield">Faculty of Pharmaceutical Sciences</wicri:noCountry></affiliation></author><author><name sortKey="Bronselaer, Antoon" sort="Bronselaer, Antoon" uniqKey="Bronselaer A" first="Antoon" last="Bronselaer">Antoon Bronselaer</name><affiliation><nlm:aff wicri:cut=" and" id="gks1137-AFF1">Department of Telecommunications and Information Processing, Faculty of Engineering and Architecture</nlm:aff><wicri:noCountry code="subfield">Faculty of Engineering and Architecture</wicri:noCountry></affiliation></author><author><name sortKey="Nielandt, Joachim" sort="Nielandt, Joachim" uniqKey="Nielandt J" first="Joachim" last="Nielandt">Joachim Nielandt</name><affiliation><nlm:aff wicri:cut=" and" id="gks1137-AFF1">Department of Telecommunications and Information Processing, Faculty of Engineering and Architecture</nlm:aff><wicri:noCountry code="subfield">Faculty of Engineering and Architecture</wicri:noCountry></affiliation></author><author><name sortKey="D Ondt, Matthias" sort="D Ondt, Matthias" uniqKey="D Ondt M" first="Matthias" last="D Ondt">Matthias D Ondt</name><affiliation><nlm:aff id="gks1137-AFF1">Drug Quality and Registration (DruQuaR) group, Department of Pharmaceutical Analysis, Faculty of Pharmaceutical Sciences,</nlm:aff><wicri:noCountry code="subfield">Faculty of Pharmaceutical Sciences</wicri:noCountry></affiliation></author><author><name sortKey="Stalmans, Sofie" sort="Stalmans, Sofie" uniqKey="Stalmans S" first="Sofie" last="Stalmans">Sofie Stalmans</name><affiliation><nlm:aff id="gks1137-AFF1">Drug Quality and Registration (DruQuaR) group, Department of Pharmaceutical Analysis, Faculty of Pharmaceutical Sciences,</nlm:aff><wicri:noCountry code="subfield">Faculty of Pharmaceutical Sciences</wicri:noCountry></affiliation></author><author><name sortKey="Bracke, Nathalie" sort="Bracke, Nathalie" uniqKey="Bracke N" first="Nathalie" last="Bracke">Nathalie Bracke</name><affiliation><nlm:aff id="gks1137-AFF1">Drug Quality and Registration (DruQuaR) group, Department of Pharmaceutical Analysis, Faculty of Pharmaceutical Sciences,</nlm:aff><wicri:noCountry code="subfield">Faculty of Pharmaceutical Sciences</wicri:noCountry></affiliation></author><author><name sortKey="Verbeke, Frederick" sort="Verbeke, Frederick" uniqKey="Verbeke F" first="Frederick" last="Verbeke">Frederick Verbeke</name><affiliation><nlm:aff id="gks1137-AFF1">Drug Quality and Registration (DruQuaR) group, Department of Pharmaceutical Analysis, Faculty of Pharmaceutical Sciences,</nlm:aff><wicri:noCountry code="subfield">Faculty of Pharmaceutical Sciences</wicri:noCountry></affiliation></author><author><name sortKey="Van De Wiele, Christophe" sort="Van De Wiele, Christophe" uniqKey="Van De Wiele C" first="Christophe" last="Van De Wiele">Christophe Van De Wiele</name><affiliation wicri:level="1"><nlm:aff id="gks1137-AFF1">Department of Radiotherapy and Nuclear Medicine, Faculty of Medicine and Health Sciences, Ghent Hospital University, Ghent B-9000, Belgium</nlm:aff><country xml:lang="fr">Belgique</country><wicri:regionArea>Department of Radiotherapy and Nuclear Medicine, Faculty of Medicine and Health Sciences, Ghent Hospital University, Ghent B-9000</wicri:regionArea><wicri:noRegion>Ghent B-9000</wicri:noRegion></affiliation></author><author><name sortKey="De Tre, Guy" sort="De Tre, Guy" uniqKey="De Tre G" first="Guy" last="De Tré">Guy De Tré</name><affiliation><nlm:aff wicri:cut=" and" id="gks1137-AFF1">Department of Telecommunications and Information Processing, Faculty of Engineering and Architecture</nlm:aff><wicri:noCountry code="subfield">Faculty of Engineering and Architecture</wicri:noCountry></affiliation></author><author><name sortKey="De Spiegeleer, Bart" sort="De Spiegeleer, Bart" uniqKey="De Spiegeleer B" first="Bart" last="De Spiegeleer">Bart De Spiegeleer</name><affiliation><nlm:aff id="gks1137-AFF1">Drug Quality and Registration (DruQuaR) group, Department of Pharmaceutical Analysis, Faculty of Pharmaceutical Sciences,</nlm:aff><wicri:noCountry code="subfield">Faculty of Pharmaceutical Sciences</wicri:noCountry></affiliation></author></analytic><series><title level="j">Nucleic Acids Research</title><idno type="ISSN">0305-1048</idno><idno type="eISSN">1362-4962</idno><imprint><date when="2012">2012</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Quorum-sensing (QS) peptides are biologically attractive molecules, with a wide diversity of structures and prone to modifications altering or presenting new functionalities. Therefore, the Quorumpeps database (<ext-link ext-link-type="uri" xlink:href="http://quorumpeps.ugent.be">http://quorumpeps.ugent.be</ext-link>) is developed to give a structured overview of the QS oligopeptides, describing their microbial origin (species), functionality (method, result and receptor), peptide links and chemical characteristics (3D-structure-derived physicochemical properties). The chemical diversity observed within this group of QS signalling molecules can be used to develop new synthetic bio-active compounds.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Martin, Ca" uniqKey="Martin C">CA Martin</name></author><author><name sortKey="Hoven, Ad" uniqKey="Hoven A">AD Hoven</name></author><author><name sortKey="Cook, Am" uniqKey="Cook A">AM Cook</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Diggle, Sp" uniqKey="Diggle S">SP Diggle</name></author><author><name sortKey="Crusz, Sa" uniqKey="Crusz S">SA Crusz</name></author><author><name sortKey="Camara, M" uniqKey="Camara M">M Cámara</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tomasz, A" uniqKey="Tomasz A">A Tomasz</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Nealson, Kh" uniqKey="Nealson K">KH Nealson</name></author><author><name 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K">KV Singh</name></author><author><name sortKey="Qin, X" uniqKey="Qin X">X Qin</name></author><author><name sortKey="Garsin, Da" uniqKey="Garsin D">DA Garsin</name></author><author><name sortKey="Murray, Be" uniqKey="Murray B">BE Murray</name></author><author><name sortKey="Ausubel, Fm" uniqKey="Ausubel F">FM Ausubel</name></author><author><name sortKey="Calderwood, Sb" uniqKey="Calderwood S">SB Calderwood</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kuipers, Op" uniqKey="Kuipers O">OP Kuipers</name></author><author><name sortKey="De Ruyter, Pgga" uniqKey="De Ruyter P">PGGA de Ruyter</name></author><author><name sortKey="Kleerebezem, M" uniqKey="Kleerebezem M">M Kleerebezem</name></author><author><name sortKey="De Vos, Wm" uniqKey="De Vos W">WM de Vos</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Johnsborg, O" uniqKey="Johnsborg O">O Johnsborg</name></author><author><name sortKey="Dipe, Db" uniqKey="Dipe D">DB Dipe</name></author><author><name sortKey="Nes, If" uniqKey="Nes I">IF Nes</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Belgique</li></country></list><tree><noCountry><name sortKey="Bracke, Nathalie" sort="Bracke, Nathalie" uniqKey="Bracke N" first="Nathalie" last="Bracke">Nathalie Bracke</name><name sortKey="Bronselaer, Antoon" sort="Bronselaer, Antoon" uniqKey="Bronselaer A" first="Antoon" last="Bronselaer">Antoon Bronselaer</name><name sortKey="D Ondt, Matthias" sort="D Ondt, Matthias" uniqKey="D Ondt M" first="Matthias" last="D Ondt">Matthias D Ondt</name><name sortKey="De Spiegeleer, Bart" sort="De Spiegeleer, Bart" uniqKey="De Spiegeleer B" first="Bart" last="De Spiegeleer">Bart De Spiegeleer</name><name sortKey="De Tre, Guy" sort="De Tre, Guy" uniqKey="De Tre G" first="Guy" last="De Tré">Guy De Tré</name><name sortKey="Nielandt, Joachim" sort="Nielandt, Joachim" uniqKey="Nielandt J" first="Joachim" last="Nielandt">Joachim Nielandt</name><name sortKey="Stalmans, Sofie" sort="Stalmans, Sofie" uniqKey="Stalmans S" first="Sofie" last="Stalmans">Sofie Stalmans</name><name sortKey="Verbeke, Frederick" sort="Verbeke, Frederick" uniqKey="Verbeke F" first="Frederick" last="Verbeke">Frederick Verbeke</name><name sortKey="Wynendaele, Evelien" sort="Wynendaele, Evelien" uniqKey="Wynendaele E" first="Evelien" last="Wynendaele">Evelien Wynendaele</name></noCountry><country name="Belgique"><noRegion><name sortKey="Van De Wiele, Christophe" sort="Van De Wiele, Christophe" uniqKey="Van De Wiele C" first="Christophe" last="Van De Wiele">Christophe Van De Wiele</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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