Reconstruction and exploration of virtual middle-ear models derived from micro-CT datasets
Identifieur interne : 000435 ( PascalFrancis/Checkpoint ); précédent : 000434; suivant : 000436Reconstruction and exploration of virtual middle-ear models derived from micro-CT datasets
Auteurs : Dong H. Lee [États-Unis] ; Sonny Chan [États-Unis] ; Curt Salisbury [États-Unis] ; Namkeun Kim [États-Unis] ; Kenneth Salisbury [États-Unis] ; Sunil Puria [États-Unis] ; Nikolas H. Blevins [États-Unis]Source :
- Hearing research [ 0378-5955 ] ; 2010.
Descripteurs français
- Pascal (Inist)
- Wicri :
- topic : Homme.
English descriptors
- KwdEn :
Abstract
Background: Middle-ear anatomy is integrally linked to both its normal function and its response to disease processes. Micro-CT imaging provides an opportunity to capture high-resolution anatomical data in a relatively quick and non-destructive manner. However, to optimally extract functionally relevant details, an intuitive means of reconstructing and interacting with these data is needed. Materials and methods: A micro-CT scanner was used to obtain high-resolution scans of freshly explanted human temporal bones. An advanced volume renderer was adapted to enable real-time reconstruction, display, and manipulation of these volumetric datasets. A custom-designed user interface provided for semi-automated threshold segmentation. A 6-degrees-of-freedom navigation device was designed and fabricated to enable exploration of the 3D space in a manner intuitive to those comfortable with the use of a surgical microscope. Standard haptic devices were also incorporated to assist in navigation and exploration. Results: Our visualization workstation could be adapted to allow for the effective exploration of middle-ear micro-CT datasets. Functionally significant anatomical details could be recognized and objective data could be extracted. Conclusions: We have developed an intuitive, rapid, and effective means of exploring otological micro-CT datasets. This system may provide a foundation for additional work based on middle-ear anatomical data.
Affiliations:
Links toward previous steps (curation, corpus...)
Links to Exploration step
Pascal:10-0273955Le document en format XML
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Blevins</name><affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Department of Otolaryngology-HNS, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>6 aut.</sZ><sZ>7 aut.</sZ></inist:fA14><country>États-Unis</country><placeName><region type="state">Californie</region></placeName></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">INIST</idno><idno type="inist">10-0273955</idno><date when="2010">2010</date><idno type="stanalyst">PASCAL 10-0273955 INIST</idno><idno type="RBID">Pascal:10-0273955</idno><idno type="wicri:Area/PascalFrancis/Corpus">000620</idno><idno type="wicri:Area/PascalFrancis/Curation">000D85</idno><idno type="wicri:Area/PascalFrancis/Checkpoint">000435</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a">Reconstruction and exploration of virtual middle-ear models derived from micro-CT datasets</title><author><name sortKey="Lee, Dong H" sort="Lee, Dong H" uniqKey="Lee D" first="Dong H." last="Lee">Dong H. Lee</name><affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Department of Otolaryngology-HNS, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>6 aut.</sZ><sZ>7 aut.</sZ></inist:fA14><country>États-Unis</country><placeName><region type="state">Californie</region></placeName></affiliation><affiliation wicri:level="2"><inist:fA14 i1="06"><s1>School of Medicine, Washington University</s1><s2>St. Louis, MO 63130</s2><s3>USA</s3><sZ>1 aut.</sZ></inist:fA14><country>États-Unis</country><placeName><region type="state">Missouri (État)</region></placeName></affiliation></author><author><name sortKey="Chan, Sonny" sort="Chan, Sonny" uniqKey="Chan S" first="Sonny" last="Chan">Sonny Chan</name><affiliation wicri:level="2"><inist:fA14 i1="03"><s1>Department of Computer Science, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>2 aut.</sZ><sZ>5 aut.</sZ></inist:fA14><country>États-Unis</country><placeName><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Salisbury, Curt" sort="Salisbury, Curt" uniqKey="Salisbury C" first="Curt" last="Salisbury">Curt Salisbury</name><affiliation wicri:level="2"><inist:fA14 i1="02"><s1>Department of Mechanical Engineering, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>États-Unis</country><placeName><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Kim, Namkeun" sort="Kim, Namkeun" uniqKey="Kim N" first="Namkeun" last="Kim">Namkeun Kim</name><affiliation wicri:level="2"><inist:fA14 i1="02"><s1>Department of Mechanical Engineering, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>États-Unis</country><placeName><region type="state">Californie</region></placeName></affiliation><affiliation wicri:level="2"><inist:fA14 i1="05"><s1>Palo Alto Veterans Administration</s1><s2>Palo Alto, CA 94305</s2><s3>USA</s3><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>États-Unis</country><placeName><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Salisbury, Kenneth" sort="Salisbury, Kenneth" uniqKey="Salisbury K" first="Kenneth" last="Salisbury">Kenneth Salisbury</name><affiliation wicri:level="2"><inist:fA14 i1="03"><s1>Department of Computer Science, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>2 aut.</sZ><sZ>5 aut.</sZ></inist:fA14><country>États-Unis</country><placeName><region type="state">Californie</region></placeName></affiliation><affiliation wicri:level="2"><inist:fA14 i1="04"><s1>Department of General Surgery, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>5 aut.</sZ></inist:fA14><country>États-Unis</country><placeName><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Puria, Sunil" sort="Puria, Sunil" uniqKey="Puria S" first="Sunil" last="Puria">Sunil Puria</name><affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Department of Otolaryngology-HNS, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>6 aut.</sZ><sZ>7 aut.</sZ></inist:fA14><country>États-Unis</country><placeName><region type="state">Californie</region></placeName></affiliation><affiliation wicri:level="2"><inist:fA14 i1="02"><s1>Department of Mechanical Engineering, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>États-Unis</country><placeName><region type="state">Californie</region></placeName></affiliation><affiliation wicri:level="2"><inist:fA14 i1="05"><s1>Palo Alto Veterans Administration</s1><s2>Palo Alto, CA 94305</s2><s3>USA</s3><sZ>4 aut.</sZ><sZ>6 aut.</sZ></inist:fA14><country>États-Unis</country><placeName><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Blevins, Nikolas H" sort="Blevins, Nikolas H" uniqKey="Blevins N" first="Nikolas H." last="Blevins">Nikolas H. Blevins</name><affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Department of Otolaryngology-HNS, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>6 aut.</sZ><sZ>7 aut.</sZ></inist:fA14><country>États-Unis</country><placeName><region type="state">Californie</region></placeName></affiliation></author></analytic><series><title level="j" type="main">Hearing research</title><title level="j" type="abbreviated">Hear. res.</title><idno type="ISSN">0378-5955</idno><imprint><date when="2010">2010</date></imprint></series></biblStruct></sourceDesc><seriesStmt><title level="j" type="main">Hearing research</title><title level="j" type="abbreviated">Hear. res.</title><idno type="ISSN">0378-5955</idno></seriesStmt></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Explant</term><term>Human</term><term>Middle ear</term><term>Models</term><term>Temporal bone</term></keywords><keywords scheme="Pascal" xml:lang="fr"><term>Oreille moyenne</term><term>Modèle</term><term>Explant</term><term>Os temporal</term><term>Homme</term></keywords><keywords scheme="Wicri" type="topic" xml:lang="fr"><term>Homme</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Background: Middle-ear anatomy is integrally linked to both its normal function and its response to disease processes. Micro-CT imaging provides an opportunity to capture high-resolution anatomical data in a relatively quick and non-destructive manner. However, to optimally extract functionally relevant details, an intuitive means of reconstructing and interacting with these data is needed. Materials and methods: A micro-CT scanner was used to obtain high-resolution scans of freshly explanted human temporal bones. An advanced volume renderer was adapted to enable real-time reconstruction, display, and manipulation of these volumetric datasets. A custom-designed user interface provided for semi-automated threshold segmentation. A 6-degrees-of-freedom navigation device was designed and fabricated to enable exploration of the 3D space in a manner intuitive to those comfortable with the use of a surgical microscope. Standard haptic devices were also incorporated to assist in navigation and exploration. Results: Our visualization workstation could be adapted to allow for the effective exploration of middle-ear micro-CT datasets. Functionally significant anatomical details could be recognized and objective data could be extracted. Conclusions: We have developed an intuitive, rapid, and effective means of exploring otological micro-CT datasets. This system may provide a foundation for additional work based on middle-ear anatomical data.</div></front></TEI><inist><standard h6="B"><pA><fA01 i1="01" i2="1"><s0>0378-5955</s0></fA01><fA02 i1="01"><s0>HERED3</s0></fA02><fA03 i2="1"><s0>Hear. res.</s0></fA03><fA05><s2>263</s2></fA05><fA06><s2>1-2</s2></fA06><fA08 i1="01" i2="1" l="ENG"><s1>Reconstruction and exploration of virtual middle-ear models derived from micro-CT datasets</s1></fA08><fA09 i1="01" i2="1" l="ENG"><s1>MEMRO 2009 - Middle-Ear Science and Technology</s1></fA09><fA11 i1="01" i2="1"><s1>LEE (Dong H.)</s1></fA11><fA11 i1="02" i2="1"><s1>CHAN (Sonny)</s1></fA11><fA11 i1="03" i2="1"><s1>SALISBURY (Curt)</s1></fA11><fA11 i1="04" i2="1"><s1>KIM (Namkeun)</s1></fA11><fA11 i1="05" i2="1"><s1>SALISBURY (Kenneth)</s1></fA11><fA11 i1="06" i2="1"><s1>PURIA (Sunil)</s1></fA11><fA11 i1="07" i2="1"><s1>BLEVINS (Nikolas H.)</s1></fA11><fA12 i1="01" i2="1"><s1>PURIA (Sunil)</s1><s9>ed.</s9></fA12><fA12 i1="02" i2="1"><s1>GOODE (Richard L.)</s1><s9>ed.</s9></fA12><fA12 i1="03" i2="1"><s1>STEELE (Charles)</s1><s9>ed.</s9></fA12><fA14 i1="01"><s1>Department of Otolaryngology-HNS, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>6 aut.</sZ><sZ>7 aut.</sZ></fA14><fA14 i1="02"><s1>Department of Mechanical Engineering, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>3 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ></fA14><fA14 i1="03"><s1>Department of Computer Science, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>2 aut.</sZ><sZ>5 aut.</sZ></fA14><fA14 i1="04"><s1>Department of General Surgery, Stanford University</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>5 aut.</sZ></fA14><fA14 i1="05"><s1>Palo Alto Veterans Administration</s1><s2>Palo Alto, CA 94305</s2><s3>USA</s3><sZ>4 aut.</sZ><sZ>6 aut.</sZ></fA14><fA14 i1="06"><s1>School of Medicine, Washington University</s1><s2>St. Louis, MO 63130</s2><s3>USA</s3><sZ>1 aut.</sZ></fA14><fA15 i1="01"><s1>Stanford University, Departments of Mechanical Engineering and Otolaryngology-HNS</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>1 aut.</sZ></fA15><fA15 i1="02"><s1>Stanford University, Departments of Otolaryngology-HNS</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>2 aut.</sZ></fA15><fA15 i1="03"><s1>Stanford University, Departments of Mechanical Engineering</s1><s2>Stanford, CA 94305</s2><s3>USA</s3><sZ>3 aut.</sZ></fA15><fA20><s1>198-203</s1></fA20><fA21><s1>2010</s1></fA21><fA23 i1="01"><s0>ENG</s0></fA23><fA43 i1="01"><s1>INIST</s1><s2>17535</s2><s5>354000181769590240</s5></fA43><fA44><s0>0000</s0><s1>© 2010 INIST-CNRS. All rights reserved.</s1></fA44><fA45><s0>1/4 p.</s0></fA45><fA47 i1="01" i2="1"><s0>10-0273955</s0></fA47><fA60><s1>P</s1><s2>C</s2><s3>PR</s3></fA60><fA61><s0>A</s0></fA61><fA64 i1="01" i2="1"><s0>Hearing research</s0></fA64><fA66 i1="01"><s0>NLD</s0></fA66><fC01 i1="01" l="ENG"><s0>Background: Middle-ear anatomy is integrally linked to both its normal function and its response to disease processes. Micro-CT imaging provides an opportunity to capture high-resolution anatomical data in a relatively quick and non-destructive manner. However, to optimally extract functionally relevant details, an intuitive means of reconstructing and interacting with these data is needed. Materials and methods: A micro-CT scanner was used to obtain high-resolution scans of freshly explanted human temporal bones. An advanced volume renderer was adapted to enable real-time reconstruction, display, and manipulation of these volumetric datasets. A custom-designed user interface provided for semi-automated threshold segmentation. A 6-degrees-of-freedom navigation device was designed and fabricated to enable exploration of the 3D space in a manner intuitive to those comfortable with the use of a surgical microscope. Standard haptic devices were also incorporated to assist in navigation and exploration. Results: Our visualization workstation could be adapted to allow for the effective exploration of middle-ear micro-CT datasets. Functionally significant anatomical details could be recognized and objective data could be extracted. Conclusions: We have developed an intuitive, rapid, and effective means of exploring otological micro-CT datasets. This system may provide a foundation for additional work based on middle-ear anatomical data.</s0></fC01><fC02 i1="01" i2="X"><s0>002B25C03</s0></fC02><fC02 i1="02" i2="X"><s0>002B10D02</s0></fC02><fC03 i1="01" i2="X" l="FRE"><s0>Oreille moyenne</s0><s5>01</s5></fC03><fC03 i1="01" i2="X" l="ENG"><s0>Middle ear</s0><s5>01</s5></fC03><fC03 i1="01" i2="X" l="SPA"><s0>Oido medio</s0><s5>01</s5></fC03><fC03 i1="02" i2="X" l="FRE"><s0>Modèle</s0><s5>02</s5></fC03><fC03 i1="02" i2="X" l="ENG"><s0>Models</s0><s5>02</s5></fC03><fC03 i1="02" i2="X" l="SPA"><s0>Modelo</s0><s5>02</s5></fC03><fC03 i1="03" i2="X" l="FRE"><s0>Explant</s0><s5>03</s5></fC03><fC03 i1="03" i2="X" l="ENG"><s0>Explant</s0><s5>03</s5></fC03><fC03 i1="03" i2="X" l="SPA"><s0>Explante</s0><s5>03</s5></fC03><fC03 i1="04" i2="X" l="FRE"><s0>Os temporal</s0><s5>04</s5></fC03><fC03 i1="04" i2="X" l="ENG"><s0>Temporal bone</s0><s5>04</s5></fC03><fC03 i1="04" i2="X" l="SPA"><s0>Hueso temporal</s0><s5>04</s5></fC03><fC03 i1="05" i2="X" l="FRE"><s0>Homme</s0><s5>54</s5></fC03><fC03 i1="05" i2="X" l="ENG"><s0>Human</s0><s5>54</s5></fC03><fC03 i1="05" i2="X" l="SPA"><s0>Hombre</s0><s5>54</s5></fC03><fN21><s1>181</s1></fN21><fN44 i1="01"><s1>OTO</s1></fN44><fN82><s1>OTO</s1></fN82></pA><pR><fA30 i1="01" i2="1" l="ENG"><s1>Middle-Ear Mechanics in Research and Otology (2009 MEMRO) Symposium</s1><s2>5</s2><s3>Stanford, CA USA</s3><s4>2009-06-24</s4></fA30></pR></standard></inist><affiliations><list><country><li>États-Unis</li></country><region><li>Californie</li><li>Missouri (État)</li></region></list><tree><country name="États-Unis"><region name="Californie"><name sortKey="Lee, Dong H" sort="Lee, Dong H" uniqKey="Lee D" first="Dong H." last="Lee">Dong H. Lee</name></region><name sortKey="Blevins, Nikolas H" sort="Blevins, Nikolas H" uniqKey="Blevins N" first="Nikolas H." last="Blevins">Nikolas H. Blevins</name><name sortKey="Chan, Sonny" sort="Chan, Sonny" uniqKey="Chan S" first="Sonny" last="Chan">Sonny Chan</name><name sortKey="Kim, Namkeun" sort="Kim, Namkeun" uniqKey="Kim N" first="Namkeun" last="Kim">Namkeun Kim</name><name sortKey="Kim, Namkeun" sort="Kim, Namkeun" uniqKey="Kim N" first="Namkeun" last="Kim">Namkeun Kim</name><name sortKey="Lee, Dong H" sort="Lee, Dong H" uniqKey="Lee D" first="Dong H." last="Lee">Dong H. Lee</name><name sortKey="Puria, Sunil" sort="Puria, Sunil" uniqKey="Puria S" first="Sunil" last="Puria">Sunil Puria</name><name sortKey="Puria, Sunil" sort="Puria, Sunil" uniqKey="Puria S" first="Sunil" last="Puria">Sunil Puria</name><name sortKey="Puria, Sunil" sort="Puria, Sunil" uniqKey="Puria S" first="Sunil" last="Puria">Sunil Puria</name><name sortKey="Salisbury, Curt" sort="Salisbury, Curt" uniqKey="Salisbury C" first="Curt" last="Salisbury">Curt Salisbury</name><name sortKey="Salisbury, Kenneth" sort="Salisbury, Kenneth" uniqKey="Salisbury K" first="Kenneth" last="Salisbury">Kenneth Salisbury</name><name sortKey="Salisbury, Kenneth" sort="Salisbury, Kenneth" uniqKey="Salisbury K" first="Kenneth" last="Salisbury">Kenneth Salisbury</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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