Characterization of Two Novel Gammapapillomaviruses, HPV179 and HPV184, Isolated from Common Warts of a Renal-Transplant Recipient
Identifieur interne : 000219 ( Ncbi/Checkpoint ); précédent : 000218; suivant : 000220Characterization of Two Novel Gammapapillomaviruses, HPV179 and HPV184, Isolated from Common Warts of a Renal-Transplant Recipient
Auteurs : Lea Hošnjak [Slovénie] ; Boštjan J. Kocjan [Slovénie] ; Branko Pirš [Slovénie] ; Katja Seme [Slovénie] ; Mario Poljak [Slovénie]Source :
- PLoS ONE [ 1932-6203 ] ; 2015.
Abstract
Url:
DOI: 10.1371/journal.pone.0119154
PubMed: 25748516
PubMed Central: 4351898
Affiliations:
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Characterization of Two Novel <italic>Gammapapillomaviruses</italic>, HPV179 and HPV184, Isolated from Common Warts of a Renal-Transplant Recipient</title><author><name sortKey="Hosnjak, Lea" sort="Hosnjak, Lea" uniqKey="Hosnjak L" first="Lea" last="Hošnjak">Lea Hošnjak</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia</addr-line></nlm:aff><country xml:lang="fr">Slovénie</country><wicri:regionArea>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana</wicri:regionArea><wicri:noRegion>Ljubljana</wicri:noRegion></affiliation></author><author><name sortKey="Kocjan, Bostjan J" sort="Kocjan, Bostjan J" uniqKey="Kocjan B" first="Boštjan J." last="Kocjan">Boštjan J. Kocjan</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia</addr-line></nlm:aff><country xml:lang="fr">Slovénie</country><wicri:regionArea>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana</wicri:regionArea><wicri:noRegion>Ljubljana</wicri:noRegion></affiliation></author><author><name sortKey="Pirs, Branko" sort="Pirs, Branko" uniqKey="Pirs B" first="Branko" last="Pirš">Branko Pirš</name><affiliation wicri:level="1"><nlm:aff id="aff002"><addr-line>Private Center for Laser and Aesthetic Dermatology, Ljubljana, Slovenia</addr-line></nlm:aff><country xml:lang="fr">Slovénie</country><wicri:regionArea>Private Center for Laser and Aesthetic Dermatology, Ljubljana</wicri:regionArea><wicri:noRegion>Ljubljana</wicri:noRegion></affiliation></author><author><name sortKey="Seme, Katja" sort="Seme, Katja" uniqKey="Seme K" first="Katja" last="Seme">Katja Seme</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia</addr-line></nlm:aff><country xml:lang="fr">Slovénie</country><wicri:regionArea>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana</wicri:regionArea><wicri:noRegion>Ljubljana</wicri:noRegion></affiliation></author><author><name sortKey="Poljak, Mario" sort="Poljak, Mario" uniqKey="Poljak M" first="Mario" last="Poljak">Mario Poljak</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia</addr-line></nlm:aff><country xml:lang="fr">Slovénie</country><wicri:regionArea>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana</wicri:regionArea><wicri:noRegion>Ljubljana</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">25748516</idno><idno type="pmc">4351898</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4351898</idno><idno type="RBID">PMC:4351898</idno><idno type="doi">10.1371/journal.pone.0119154</idno><date when="2015">2015</date><idno type="wicri:Area/Pmc/Corpus">000006</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000006</idno><idno type="wicri:Area/Pmc/Curation">000006</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000006</idno><idno type="wicri:Area/Pmc/Checkpoint">000042</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000042</idno><idno type="wicri:Area/Ncbi/Merge">000219</idno><idno type="wicri:Area/Ncbi/Curation">000219</idno><idno type="wicri:Area/Ncbi/Checkpoint">000219</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Characterization of Two Novel <italic>Gammapapillomaviruses</italic>, HPV179 and HPV184, Isolated from Common Warts of a Renal-Transplant Recipient</title><author><name sortKey="Hosnjak, Lea" sort="Hosnjak, Lea" uniqKey="Hosnjak L" first="Lea" last="Hošnjak">Lea Hošnjak</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia</addr-line></nlm:aff><country xml:lang="fr">Slovénie</country><wicri:regionArea>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana</wicri:regionArea><wicri:noRegion>Ljubljana</wicri:noRegion></affiliation></author><author><name sortKey="Kocjan, Bostjan J" sort="Kocjan, Bostjan J" uniqKey="Kocjan B" first="Boštjan J." last="Kocjan">Boštjan J. Kocjan</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia</addr-line></nlm:aff><country xml:lang="fr">Slovénie</country><wicri:regionArea>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana</wicri:regionArea><wicri:noRegion>Ljubljana</wicri:noRegion></affiliation></author><author><name sortKey="Pirs, Branko" sort="Pirs, Branko" uniqKey="Pirs B" first="Branko" last="Pirš">Branko Pirš</name><affiliation wicri:level="1"><nlm:aff id="aff002"><addr-line>Private Center for Laser and Aesthetic Dermatology, Ljubljana, Slovenia</addr-line></nlm:aff><country xml:lang="fr">Slovénie</country><wicri:regionArea>Private Center for Laser and Aesthetic Dermatology, Ljubljana</wicri:regionArea><wicri:noRegion>Ljubljana</wicri:noRegion></affiliation></author><author><name sortKey="Seme, Katja" sort="Seme, Katja" uniqKey="Seme K" first="Katja" last="Seme">Katja Seme</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia</addr-line></nlm:aff><country xml:lang="fr">Slovénie</country><wicri:regionArea>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana</wicri:regionArea><wicri:noRegion>Ljubljana</wicri:noRegion></affiliation></author><author><name sortKey="Poljak, Mario" sort="Poljak, Mario" uniqKey="Poljak M" first="Mario" last="Poljak">Mario Poljak</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia</addr-line></nlm:aff><country xml:lang="fr">Slovénie</country><wicri:regionArea>Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana</wicri:regionArea><wicri:noRegion>Ljubljana</wicri:noRegion></affiliation></author></analytic><series><title level="j">PLoS ONE</title><idno type="eISSN">1932-6203</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p><italic>Gammapapillomavirus</italic> (<italic>Gamma</italic>-PV) is a diverse and rapidly expanding PV-genus, currently consisting of 76 fully characterized human papillomavirus (HPV) types. In this study, DNA genomes of two novel HPV types, HPV179 and HPV184, obtained from two distinct facial <italic>verrucae vulgares</italic> specimens of a 64 year-old renal-transplant recipient, were fully cloned, sequenced and characterized. HPV179 and HPV184 genomes comprise 7,228-bp and 7,324-bp, respectively, and contain four early (E1, E2, E6 and E7) and two late genes (L1 and L2); the non-coding region is typically positioned between L1 and E6 genes. Phylogenetic analysis of the L1 nucleotide sequence placed both novel types within the <italic>Gamma</italic>-PV genus: HPV179 was classified as a novel member of species <italic>Gamma</italic>-15, additionally containing HPV135 and HPV146, while HPV184 was classified as a single member of a novel species <italic>Gamma</italic>-25. HPV179 and HPV184 type-specific quantitative real-time PCRs were further developed and used in combination with human <italic>beta</italic>-globin gene quantitative real-time PCR to determine the prevalence and viral load of the novel types in the patient’s facial warts and several follow-up skin specimens, and in a representative collection, a total of 569 samples, of HPV-associated benign and malignant neoplasms, hair follicles and anal and oral mucosa specimens obtained from immunocompetent individuals. HPV179 and HPV184 viral loads in patients’ facial warts were estimated to be 2,463 and 3,200 genome copies per single cell, respectively, suggesting their active role in the development of common warts in organ-transplant recipients. In addition, in this particular patient, both novel types had established a persistent infection of the skin for more than four years. Among immunocompetent individuals, HPV179 was further detected in low-copy numbers in a few skin specimens, indicating its cutaneous tissue tropism, while HPV184 was further detected in low-copy numbers in one mucosal and a few skin specimens, suggesting its dual tissue tropism.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Bernard, Hu" uniqKey="Bernard H">HU Bernard</name></author><author><name sortKey="Burk, Rd" uniqKey="Burk R">RD Burk</name></author><author><name sortKey="Chen, Z" uniqKey="Chen Z">Z Chen</name></author><author><name sortKey="Van Doorslaer, K" uniqKey="Van Doorslaer K">K van Doorslaer</name></author><author><name sortKey="Zur Hausen, H" uniqKey="Zur Hausen H">H Zur Hausen</name></author><author><name sortKey="De Villiers, Em" uniqKey="De Villiers E">EM de Villiers</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Cubie, Ha" uniqKey="Cubie H">HA 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Kocjan</name></author><author><name sortKey="Potocnik, M" uniqKey="Potocnik M">M Potocnik</name></author><author><name sortKey="Seme, K" uniqKey="Seme K">K Seme</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Marur, S" uniqKey="Marur S">S Marur</name></author><author><name sortKey="D Souza, G" uniqKey="D Souza G">G D'Souza</name></author><author><name sortKey="Westra, Wh" uniqKey="Westra W">WH Westra</name></author><author><name sortKey="Forastiere, Aa" uniqKey="Forastiere A">AA Forastiere</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Slovénie</li></country></list><tree><country name="Slovénie"><noRegion><name sortKey="Hosnjak, Lea" sort="Hosnjak, Lea" uniqKey="Hosnjak L" first="Lea" last="Hošnjak">Lea Hošnjak</name></noRegion><name sortKey="Kocjan, Bostjan J" sort="Kocjan, Bostjan J" uniqKey="Kocjan B" first="Boštjan J." last="Kocjan">Boštjan J. Kocjan</name><name sortKey="Pirs, Branko" sort="Pirs, Branko" uniqKey="Pirs B" first="Branko" last="Pirš">Branko Pirš</name><name sortKey="Poljak, Mario" sort="Poljak, Mario" uniqKey="Poljak M" first="Mario" last="Poljak">Mario Poljak</name><name sortKey="Seme, Katja" sort="Seme, Katja" uniqKey="Seme K" first="Katja" last="Seme">Katja Seme</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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