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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Functional genomic analysis of an uncultured δ-proteobacterium in the sponge <italic>Cymbastela concentrica</italic>
</title>
<author><name sortKey="Liu, Michael Yizhe" sort="Liu, Michael Yizhe" uniqKey="Liu M" first="Michael Yizhe" last="Liu">Michael Yizhe Liu</name>
<affiliation><nlm:aff id="aff1"><institution>Centre for Marine Bio-Innovation and School of Biotechnology and Biomolecular Sciences, The University of New South Wales</institution>
, Sydney, New South Wales,<country>Australia</country>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Kjelleberg, Staffan" sort="Kjelleberg, Staffan" uniqKey="Kjelleberg S" first="Staffan" last="Kjelleberg">Staffan Kjelleberg</name>
<affiliation><nlm:aff id="aff1"><institution>Centre for Marine Bio-Innovation and School of Biotechnology and Biomolecular Sciences, The University of New South Wales</institution>
, Sydney, New South Wales,<country>Australia</country>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Thomas, Torsten" sort="Thomas, Torsten" uniqKey="Thomas T" first="Torsten" last="Thomas">Torsten Thomas</name>
<affiliation><nlm:aff id="aff1"><institution>Centre for Marine Bio-Innovation and School of Biotechnology and Biomolecular Sciences, The University of New South Wales</institution>
, Sydney, New South Wales,<country>Australia</country>
</nlm:aff>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PMC</idno>
<idno type="pmid">20811472</idno>
<idno type="pmc">3105712</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3105712</idno>
<idno type="RBID">PMC:3105712</idno>
<idno type="doi">10.1038/ismej.2010.139</idno>
<date when="2010">2010</date>
<idno type="wicri:Area/Pmc/Corpus">000020</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Functional genomic analysis of an uncultured δ-proteobacterium in the sponge <italic>Cymbastela concentrica</italic>
</title>
<author><name sortKey="Liu, Michael Yizhe" sort="Liu, Michael Yizhe" uniqKey="Liu M" first="Michael Yizhe" last="Liu">Michael Yizhe Liu</name>
<affiliation><nlm:aff id="aff1"><institution>Centre for Marine Bio-Innovation and School of Biotechnology and Biomolecular Sciences, The University of New South Wales</institution>
, Sydney, New South Wales,<country>Australia</country>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Kjelleberg, Staffan" sort="Kjelleberg, Staffan" uniqKey="Kjelleberg S" first="Staffan" last="Kjelleberg">Staffan Kjelleberg</name>
<affiliation><nlm:aff id="aff1"><institution>Centre for Marine Bio-Innovation and School of Biotechnology and Biomolecular Sciences, The University of New South Wales</institution>
, Sydney, New South Wales,<country>Australia</country>
</nlm:aff>
</affiliation>
</author>
<author><name sortKey="Thomas, Torsten" sort="Thomas, Torsten" uniqKey="Thomas T" first="Torsten" last="Thomas">Torsten Thomas</name>
<affiliation><nlm:aff id="aff1"><institution>Centre for Marine Bio-Innovation and School of Biotechnology and Biomolecular Sciences, The University of New South Wales</institution>
, Sydney, New South Wales,<country>Australia</country>
</nlm:aff>
</affiliation>
</author>
</analytic>
<series><title level="j">The ISME journal</title>
<idno type="ISSN">1751-7362</idno>
<idno type="eISSN">1751-7370</idno>
<imprint><date when="2010">2010</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en"><p>Marine sponges are ancient, sessile, filter-feeding metazoans, which represent a significant component of the benthic communities throughout the world. Sponges harbor a remarkable diversity of bacteria, however, little is known about the functional properties of such bacterial symbionts. In this study, we present the genomic and functional characterization of an uncultured δ-proteobacterium associated with the sponge <italic>Cymbastela concentrica</italic>
. We show that this organism represents a novel phylogenetic clade and propose that it lives in association with a cyanobacterium. We also provide an overview of the predicted functional and ecological properties of this δ-proteobacterium, and discuss its complex interactions with surrounding cells and milieu, including traits of cell attachment, nutrient transport and protein–protein interactions.</p>
</div>
</front>
</TEI>
<pmc article-type="research-article"><pmc-comment>The publisher of this article does not allow downloading of the full text in XML form.</pmc-comment>
<front><journal-meta><journal-id journal-id-type="nlm-ta">ISME J</journal-id>
<journal-title-group><journal-title>The ISME journal</journal-title>
</journal-title-group>
<issn pub-type="ppub">1751-7362</issn>
<issn pub-type="epub">1751-7370</issn>
<publisher><publisher-name>Nature Publishing Group</publisher-name>
</publisher>
</journal-meta>
<article-meta><article-id pub-id-type="pmid">20811472</article-id>
<article-id pub-id-type="pmc">3105712</article-id>
<article-id pub-id-type="pii">ismej2010139</article-id>
<article-id pub-id-type="doi">10.1038/ismej.2010.139</article-id>
<article-categories><subj-group subj-group-type="heading"><subject>Original Article</subject>
</subj-group>
</article-categories>
<title-group><article-title>Functional genomic analysis of an uncultured δ-proteobacterium in the sponge <italic>Cymbastela concentrica</italic>
</article-title>
<alt-title alt-title-type="running">Characterization of a novel sponge symbiont</alt-title>
</title-group>
<contrib-group><contrib contrib-type="author"><name><surname>Liu</surname>
<given-names>Michael Yizhe</given-names>
</name>
<xref ref-type="aff" rid="aff1">1</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Kjelleberg</surname>
<given-names>Staffan</given-names>
</name>
<xref ref-type="aff" rid="aff1">1</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Thomas</surname>
<given-names>Torsten</given-names>
</name>
<xref ref-type="aff" rid="aff1">1</xref>
<xref ref-type="corresp" rid="caf1">*</xref>
</contrib>
<aff id="aff1"><label>1</label>
<institution>Centre for Marine Bio-Innovation and School of Biotechnology and Biomolecular Sciences, The University of New South Wales</institution>
, Sydney, New South Wales,<country>Australia</country>
</aff>
</contrib-group>
<author-notes><corresp id="caf1"><label>*</label>
<institution>Centre for Marine Bio-Innovation and School of Biotechnology and Biomolecular Sciences, The University of New South Wales</institution>
, Sydney, NSW 2052, <country>Australia</country>
. E-mail: <email>t.thomas@unsw.edu.au</email>
</corresp>
</author-notes>
<pub-date pub-type="ppub"><month>03</month>
<year>2011</year>
</pub-date>
<pub-date pub-type="epub"><day>02</day>
<month>09</month>
<year>2010</year>
</pub-date>
<volume>5</volume>
<issue>3</issue>
<fpage>427</fpage>
<lpage>435</lpage>
<history><date date-type="received"><day>15</day>
<month>03</month>
<year>2010</year>
</date>
<date date-type="rev-recd"><day>09</day>
<month>07</month>
<year>2010</year>
</date>
<date date-type="accepted"><day>09</day>
<month>07</month>
<year>2010</year>
</date>
</history>
<permissions><copyright-statement>Copyright © 2011 International Society for Microbial Ecology</copyright-statement>
<copyright-year>2011</copyright-year>
<copyright-holder>International Society for Microbial Ecology</copyright-holder>
</permissions>
<abstract><p>Marine sponges are ancient, sessile, filter-feeding metazoans, which represent a significant component of the benthic communities throughout the world. Sponges harbor a remarkable diversity of bacteria, however, little is known about the functional properties of such bacterial symbionts. In this study, we present the genomic and functional characterization of an uncultured δ-proteobacterium associated with the sponge <italic>Cymbastela concentrica</italic>
. We show that this organism represents a novel phylogenetic clade and propose that it lives in association with a cyanobacterium. We also provide an overview of the predicted functional and ecological properties of this δ-proteobacterium, and discuss its complex interactions with surrounding cells and milieu, including traits of cell attachment, nutrient transport and protein–protein interactions.</p>
</abstract>
<kwd-group><kwd>δ-proteobacterium</kwd>
<kwd>sponge</kwd>
<kwd>symbiosis</kwd>
<kwd>cyanobacterium</kwd>
<kwd>genome</kwd>
</kwd-group>
</article-meta>
</front>
</pmc>
</record>
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