Serveur d'exploration Cyberinfrastructure

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Predictive energy landscapes for folding α-helical transmembrane proteins

Identifieur interne : 000190 ( Main/Merge ); précédent : 000189; suivant : 000191

Predictive energy landscapes for folding α-helical transmembrane proteins

Auteurs : Bobby L. Kim ; Nicholas P. Schafer ; Peter G. Wolynes

Source :

RBID : PMC:4121805

Abstract

Significance

The understanding of how membrane proteins fold pales in comparison with the understanding of globular protein folding. This discrepancy is partly due to the fact that membrane proteins are difficult to work with experimentally. In turn, the lack of high-quality experimental data has caused modeling of membrane proteins to lag behind. Also, the extent to which the translocon assists transmembrane domains in folding is unclear. The number of experimentally determined membrane protein structures has recently increased, and we may now be at the stage where it has become possible to derive transferable simulation models for studying transmembrane protein folding. We describe the optimization of one such model and its application to predicting helical packings within the native topology.


Url:
DOI: 10.1073/pnas.1410529111
PubMed: 25030446
PubMed Central: 4121805

Links toward previous steps (curation, corpus...)


Links to Exploration step

PMC:4121805

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Predictive energy landscapes for folding α-helical transmembrane proteins</title>
<author>
<name sortKey="Kim, Bobby L" sort="Kim, Bobby L" uniqKey="Kim B" first="Bobby L." last="Kim">Bobby L. Kim</name>
</author>
<author>
<name sortKey="Schafer, Nicholas P" sort="Schafer, Nicholas P" uniqKey="Schafer N" first="Nicholas P." last="Schafer">Nicholas P. Schafer</name>
</author>
<author>
<name sortKey="Wolynes, Peter G" sort="Wolynes, Peter G" uniqKey="Wolynes P" first="Peter G." last="Wolynes">Peter G. Wolynes</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PMC</idno>
<idno type="pmid">25030446</idno>
<idno type="pmc">4121805</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4121805</idno>
<idno type="RBID">PMC:4121805</idno>
<idno type="doi">10.1073/pnas.1410529111</idno>
<date when="2014">2014</date>
<idno type="wicri:Area/Pmc/Corpus">000411</idno>
<idno type="wicri:Area/Pmc/Curation">000411</idno>
<idno type="wicri:Area/Pmc/Checkpoint">000178</idno>
<idno type="wicri:Area/Ncbi/Merge">000548</idno>
<idno type="wicri:Area/Ncbi/Curation">000548</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000548</idno>
<idno type="wicri:doubleKey">0027-8424:2014:Kim B:predictive:energy:landscapes</idno>
<idno type="wicri:Area/Main/Merge">000190</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en" level="a" type="main">Predictive energy landscapes for folding α-helical transmembrane proteins</title>
<author>
<name sortKey="Kim, Bobby L" sort="Kim, Bobby L" uniqKey="Kim B" first="Bobby L." last="Kim">Bobby L. Kim</name>
</author>
<author>
<name sortKey="Schafer, Nicholas P" sort="Schafer, Nicholas P" uniqKey="Schafer N" first="Nicholas P." last="Schafer">Nicholas P. Schafer</name>
</author>
<author>
<name sortKey="Wolynes, Peter G" sort="Wolynes, Peter G" uniqKey="Wolynes P" first="Peter G." last="Wolynes">Peter G. Wolynes</name>
</author>
</analytic>
<series>
<title level="j">Proceedings of the National Academy of Sciences of the United States of America</title>
<idno type="ISSN">0027-8424</idno>
<idno type="eISSN">1091-6490</idno>
<imprint>
<date when="2014">2014</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">
<title>Significance</title>
<p>The understanding of how membrane proteins fold pales in comparison with the understanding of globular protein folding. This discrepancy is partly due to the fact that membrane proteins are difficult to work with experimentally. In turn, the lack of high-quality experimental data has caused modeling of membrane proteins to lag behind. Also, the extent to which the translocon assists transmembrane domains in folding is unclear. The number of experimentally determined membrane protein structures has recently increased, and we may now be at the stage where it has become possible to derive transferable simulation models for studying transmembrane protein folding. We describe the optimization of one such model and its application to predicting helical packings within the native topology.</p>
</div>
</front>
</TEI>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Ticri/CIDE/explor/CyberinfraV1/Data/Main/Merge
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000190 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Merge/biblio.hfd -nk 000190 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Ticri/CIDE
   |area=    CyberinfraV1
   |flux=    Main
   |étape=   Merge
   |type=    RBID
   |clé=     PMC:4121805
   |texte=   Predictive energy landscapes for folding α-helical transmembrane proteins
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Merge/RBID.i   -Sk "pubmed:25030446" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Merge/biblio.hfd   \
       | NlmPubMed2Wicri -a CyberinfraV1 

Wicri

This area was generated with Dilib version V0.6.25.
Data generation: Thu Oct 27 09:30:58 2016. Site generation: Sun Mar 10 23:08:40 2024