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Effect of Biostimulation Using Sewage Sludge, Soybean Meal, and Wheat Straw on Oil Degradation and Bacterial Community Composition in a Contaminated Desert Soil

Identifieur interne : 000060 ( Pmc/Curation ); précédent : 000059; suivant : 000061

Effect of Biostimulation Using Sewage Sludge, Soybean Meal, and Wheat Straw on Oil Degradation and Bacterial Community Composition in a Contaminated Desert Soil

Auteurs : Sumaiya Al-Kindi ; Raeid M. M. Abed

Source :

RBID : PMC:4777724

Abstract

Waste materials have a strong potential in the bioremediation of oil-contaminated sites, because of their richness in nutrients and their economical feasibility. We used sewage sludge, soybean meal, and wheat straw to biostimulate oil degradation in a heavily contaminated desert soil. While oil degradation was assessed by following the produced CO2 and by using gas chromatography–mass spectrometry (GC–MS), shifts in bacterial community composition were monitored using illumina MiSeq. The addition of sewage sludge and wheat straw to the desert soil stimulated the respiration activities to reach 3.2–3.4 times higher than in the untreated soil, whereas the addition of soybean meal resulted in an insignificant change in the produced CO2, given the high respiration activities of the soybean meal alone. GC–MS analysis revealed that the addition of sewage sludge and wheat straw resulted in 1.7–1.8 fold increase in the degraded C14 to C30 alkanes, compared to only 1.3 fold increase in the case of soybean meal addition. The degradation of ≥90% of the C14 to C30 alkanes was measured in the soils treated with sewage sludge and wheat straw. MiSeq sequencing revealed that the majority (76.5–86.4% of total sequences) of acquired sequences from the untreated soil belonged to Alphaproteobacteria, Gammaproteobacteria, and Firmicutes. Multivariate analysis of operational taxonomic units placed the bacterial communities of the soils after the treatments in separate clusters (ANOSIM R = 0.66, P = 0.0001). The most remarkable shift in bacterial communities was in the wheat straw treatment, where 95–98% of the total sequences were affiliated to Bacilli. We conclude that sewage sludge and wheat straw are useful biostimulating agents for the cleanup of oil-contaminated desert soils.


Url:
DOI: 10.3389/fmicb.2016.00240
PubMed: 26973618
PubMed Central: 4777724

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<p>Waste materials have a strong potential in the bioremediation of oil-contaminated sites, because of their richness in nutrients and their economical feasibility. We used sewage sludge, soybean meal, and wheat straw to biostimulate oil degradation in a heavily contaminated desert soil. While oil degradation was assessed by following the produced CO
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</TEI>
<pmc article-type="research-article">
<pmc-dir>properties open_access</pmc-dir>
<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">Front Microbiol</journal-id>
<journal-id journal-id-type="iso-abbrev">Front Microbiol</journal-id>
<journal-id journal-id-type="publisher-id">Front. Microbiol.</journal-id>
<journal-title-group>
<journal-title>Frontiers in Microbiology</journal-title>
</journal-title-group>
<issn pub-type="epub">1664-302X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="pmid">26973618</article-id>
<article-id pub-id-type="pmc">4777724</article-id>
<article-id pub-id-type="doi">10.3389/fmicb.2016.00240</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Microbiology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Effect of Biostimulation Using Sewage Sludge, Soybean Meal, and Wheat Straw on Oil Degradation and Bacterial Community Composition in a Contaminated Desert Soil</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Al-Kindi</surname>
<given-names>Sumaiya</given-names>
</name>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:type="simple" xlink:href="http://loop.frontiersin.org/people/304365/overview"></uri>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Abed</surname>
<given-names>Raeid M. M.</given-names>
</name>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:type="simple" xlink:href="http://loop.frontiersin.org/people/46751/overview"></uri>
</contrib>
</contrib-group>
<aff>
<institution>Biology Department, College of Science, Sultan Qaboos University</institution>
<country>Muscat, Oman</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by:
<italic>Wael Ahmed Ismail, Arabian Gulf University, Bahrain</italic>
</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by:
<italic>Dayananda Chandrappa, University of Exeter, UK; Magdy El-Said Mohamed, Saudi Aramco, Saudi Arabia; Michel C. Boufadel, New Jersey Institute of Technology, USA</italic>
</p>
</fn>
<corresp id="fn001">*Correspondence:
<italic>Raeid M. M. Abed,
<email xlink:type="simple">rabed@mpi-bremen.de</email>
; Sumaiya Al-Kindi,
<email xlink:type="simple">alkindi33@gmail.com</email>
</italic>
</corresp>
<fn fn-type="other" id="fn002">
<p>This article was submitted to Microbiotechnology, Ecotoxicology and Bioremediation, a section of the journal Frontiers in Microbiology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>04</day>
<month>3</month>
<year>2016</year>
</pub-date>
<pub-date pub-type="collection">
<year>2016</year>
</pub-date>
<volume>7</volume>
<elocation-id>240</elocation-id>
<history>
<date date-type="received">
<day>18</day>
<month>10</month>
<year>2015</year>
</date>
<date date-type="accepted">
<day>15</day>
<month>2</month>
<year>2016</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright © 2016 Al-Kindi and Abed.</copyright-statement>
<copyright-year>2016</copyright-year>
<copyright-holder>Al-Kindi and Abed</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<license-p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</license-p>
</license>
</permissions>
<abstract>
<p>Waste materials have a strong potential in the bioremediation of oil-contaminated sites, because of their richness in nutrients and their economical feasibility. We used sewage sludge, soybean meal, and wheat straw to biostimulate oil degradation in a heavily contaminated desert soil. While oil degradation was assessed by following the produced CO
<sub>2</sub>
and by using gas chromatography–mass spectrometry (GC–MS), shifts in bacterial community composition were monitored using illumina MiSeq. The addition of sewage sludge and wheat straw to the desert soil stimulated the respiration activities to reach 3.2–3.4 times higher than in the untreated soil, whereas the addition of soybean meal resulted in an insignificant change in the produced CO
<sub>2</sub>
, given the high respiration activities of the soybean meal alone. GC–MS analysis revealed that the addition of sewage sludge and wheat straw resulted in 1.7–1.8 fold increase in the degraded C
<sub>14</sub>
to C
<sub>30</sub>
alkanes, compared to only 1.3 fold increase in the case of soybean meal addition. The degradation of ≥90% of the C
<sub>14</sub>
to C
<sub>30</sub>
alkanes was measured in the soils treated with sewage sludge and wheat straw. MiSeq sequencing revealed that the majority (76.5–86.4% of total sequences) of acquired sequences from the untreated soil belonged to Alphaproteobacteria, Gammaproteobacteria, and Firmicutes. Multivariate analysis of operational taxonomic units placed the bacterial communities of the soils after the treatments in separate clusters (ANOSIM
<italic>R </italic>
= 0.66,
<italic>P</italic>
= 0.0001). The most remarkable shift in bacterial communities was in the wheat straw treatment, where 95–98% of the total sequences were affiliated to Bacilli. We conclude that sewage sludge and wheat straw are useful biostimulating agents for the cleanup of oil-contaminated desert soils.</p>
</abstract>
<kwd-group>
<kwd>desert soil</kwd>
<kwd>oil</kwd>
<kwd>illumina</kwd>
<kwd>bioremediation</kwd>
<kwd>sewage sludge</kwd>
<kwd>soybean meal</kwd>
<kwd>wheat straw</kwd>
</kwd-group>
<funding-group>
<award-group>
<funding-source id="cn001">The Research Council of Oman (TRC)
<named-content content-type="fundref-id">10.13039/501100004787</named-content>
</funding-source>
<award-id rid="cn001">RC/SCI/BIOL/11/01</award-id>
</award-group>
</funding-group>
<counts>
<fig-count count="6"></fig-count>
<table-count count="3"></table-count>
<equation-count count="0"></equation-count>
<ref-count count="99"></ref-count>
<page-count count="14"></page-count>
<word-count count="0"></word-count>
</counts>
</article-meta>
</front>
</pmc>
</record>

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