Genomic interplay in bacterial communities: implications for growth promoting practices in animal husbandry
Identifieur interne : 000339 ( Ncbi/Merge ); précédent : 000338; suivant : 000340Genomic interplay in bacterial communities: implications for growth promoting practices in animal husbandry
Auteurs : Piklu Roy Chowdhury [Australie] ; Jessica Mckinnon [Australie] ; Ethan Wyrsch [Australie] ; Jeffrey M. Hammond [Australie] ; Ian G. Charles [Australie] ; Steven P. Djordjevic [Australie]Source :
- Frontiers in Microbiology [ 1664-302X ] ; 2014.
Abstract
The discovery of antibiotics heralded the start of a “Golden Age” in the history of medicine. Over the years, the use of antibiotics extended beyond medical practice into animal husbandry, aquaculture and agriculture. Now, however, we face the worldwide threat of diseases caused by pathogenic bacteria that are resistant to all existing major classes of antibiotic, reflecting the possibility of an end to the antibiotic era. The seriousness of the threat is underscored by the severely limited production of new classes of antibiotics. Evolution of bacteria resistant to multiple antibiotics results from the inherent genetic capability that bacteria have to adapt rapidly to changing environmental conditions. Consequently, under antibiotic selection pressures, bacteria have acquired resistance to all classes of antibiotics, sometimes very shortly after their introduction. Arguably, the evolution and rapid dissemination of multiple drug resistant genes
Url:
DOI: 10.3389/fmicb.2014.00394
PubMed: 25161648
PubMed Central: 4129626
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PMC:4129626Le document en format XML
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<front><div type="abstract" xml:lang="en"><p>The discovery of antibiotics heralded the start of a “Golden Age” in the history of medicine. Over the years, the use of antibiotics extended beyond medical practice into animal husbandry, aquaculture and agriculture. Now, however, we face the worldwide threat of diseases caused by pathogenic bacteria that are resistant to all existing major classes of antibiotic, reflecting the possibility of an end to the antibiotic era. The seriousness of the threat is underscored by the severely limited production of new classes of antibiotics. Evolution of bacteria resistant to multiple antibiotics results from the inherent genetic capability that bacteria have to adapt rapidly to changing environmental conditions. Consequently, under antibiotic selection pressures, bacteria have acquired resistance to all classes of antibiotics, sometimes very shortly after their introduction. Arguably, the evolution and rapid dissemination of multiple drug resistant genes <italic>en-masse</italic>
across microbial pathogens is one of the most serious threats to human health. In this context, effective surveillance strategies to track the development of resistance to multiple antibiotics are vital to managing global infection control. These surveillance strategies are necessary for not only human health but also for animal health, aquaculture and plant production. Shortfalls in the present surveillance strategies need to be identified. Raising awareness of the genetic events that promote co-selection of resistance to multiple antimicrobials is an important prerequisite to the design and implementation of molecular surveillance strategies. In this review we will discuss how lateral gene transfer (LGT), driven by the use of low-dose antibiotics in animal husbandry, has likely played a significant role in the evolution of multiple drug resistance (MDR) in Gram-negative bacteria and has complicated molecular surveillance strategies adopted for predicting imminent resistance threats.</p>
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<pmc article-type="review-article"><pmc-dir>properties open_access</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-ta">Front Microbiol</journal-id>
<journal-id journal-id-type="iso-abbrev">Front Microbiol</journal-id>
<journal-id journal-id-type="publisher-id">Front. Microbiol.</journal-id>
<journal-title-group><journal-title>Frontiers in Microbiology</journal-title>
</journal-title-group>
<issn pub-type="epub">1664-302X</issn>
<publisher><publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta><article-id pub-id-type="pmid">25161648</article-id>
<article-id pub-id-type="pmc">4129626</article-id>
<article-id pub-id-type="doi">10.3389/fmicb.2014.00394</article-id>
<article-categories><subj-group subj-group-type="heading"><subject>Microbiology</subject>
<subj-group><subject>Review Article</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group><article-title>Genomic interplay in bacterial communities: implications for growth promoting practices in animal husbandry</article-title>
</title-group>
<contrib-group><contrib contrib-type="author"><name><surname>Roy Chowdhury</surname>
<given-names>Piklu</given-names>
</name>
<xref ref-type="aff" rid="aff1"><sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn001"><sup>*</sup>
</xref>
<uri xlink:type="simple" xlink:href="http://community.frontiersin.org/people/u/87435"></uri>
</contrib>
<contrib contrib-type="author"><name><surname>McKinnon</surname>
<given-names>Jessica</given-names>
</name>
<xref ref-type="aff" rid="aff1"><sup>1</sup>
</xref>
<uri xlink:type="simple" xlink:href="http://community.frontiersin.org/people/u/152509"></uri>
</contrib>
<contrib contrib-type="author"><name><surname>Wyrsch</surname>
<given-names>Ethan</given-names>
</name>
<xref ref-type="aff" rid="aff1"><sup>1</sup>
</xref>
<uri xlink:type="simple" xlink:href="http://community.frontiersin.org/people/u/172408"></uri>
</contrib>
<contrib contrib-type="author"><name><surname>Hammond</surname>
<given-names>Jeffrey M.</given-names>
</name>
<xref ref-type="aff" rid="aff2"><sup>2</sup>
</xref>
<uri xlink:type="simple" xlink:href="http://community.frontiersin.org/people/u/173452"></uri>
</contrib>
<contrib contrib-type="author"><name><surname>Charles</surname>
<given-names>Ian G.</given-names>
</name>
<xref ref-type="aff" rid="aff1"><sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Djordjevic</surname>
<given-names>Steven P.</given-names>
</name>
<xref ref-type="aff" rid="aff1"><sup>1</sup>
</xref>
<uri xlink:type="simple" xlink:href="http://community.frontiersin.org/people/u/67853"></uri>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup>
<institution>The ithree institute, University of Technology Sydney</institution>
<country>Sydney, NSW, Australia</country>
</aff>
<aff id="aff2"><sup>2</sup>
<institution>NSW Department of Primary Industries, Elizabeth Macarthur Agricultural Institute</institution>
<country>Camden, NSW, Australia</country>
</aff>
<author-notes><fn fn-type="edited-by"><p>Edited by: Robert Paul Hunter, Eli Lilly and Company, USA</p>
</fn>
<fn fn-type="edited-by"><p>Reviewed by: Patrick Rik Butaye, Ghent University, Belgium; Cristina Lanzas, University of Tennessee, USA</p>
</fn>
<corresp id="fn001">*Correspondence: Piklu Roy Chowdhury, The ithree institute, University of Technology Sydney, City Campus (CB04.06) Ultimo, NSW 2007, Australia e-mail: <email xlink:type="simple">piklu.bhattacharya@uts.edu.au</email>
</corresp>
<fn fn-type="other" id="fn002"><p>This article was submitted to Antimicrobials, Resistance and Chemotherapy, a section of the journal Frontiers in Microbiology.</p>
</fn>
</author-notes>
<pub-date pub-type="epub"><day>12</day>
<month>8</month>
<year>2014</year>
</pub-date>
<pub-date pub-type="collection"><year>2014</year>
</pub-date>
<volume>5</volume>
<elocation-id>394</elocation-id>
<history><date date-type="received"><day>08</day>
<month>4</month>
<year>2014</year>
</date>
<date date-type="accepted"><day>14</day>
<month>7</month>
<year>2014</year>
</date>
</history>
<permissions><copyright-statement>Copyright © 2014 Roy Chowdhury, McKinnon, Wyrsch, Hammond, Charles and Djordjevic.</copyright-statement>
<copyright-year>2014</copyright-year>
<license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/3.0/"><license-p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</license-p>
</license>
</permissions>
<abstract><p>The discovery of antibiotics heralded the start of a “Golden Age” in the history of medicine. Over the years, the use of antibiotics extended beyond medical practice into animal husbandry, aquaculture and agriculture. Now, however, we face the worldwide threat of diseases caused by pathogenic bacteria that are resistant to all existing major classes of antibiotic, reflecting the possibility of an end to the antibiotic era. The seriousness of the threat is underscored by the severely limited production of new classes of antibiotics. Evolution of bacteria resistant to multiple antibiotics results from the inherent genetic capability that bacteria have to adapt rapidly to changing environmental conditions. Consequently, under antibiotic selection pressures, bacteria have acquired resistance to all classes of antibiotics, sometimes very shortly after their introduction. Arguably, the evolution and rapid dissemination of multiple drug resistant genes <italic>en-masse</italic>
across microbial pathogens is one of the most serious threats to human health. In this context, effective surveillance strategies to track the development of resistance to multiple antibiotics are vital to managing global infection control. These surveillance strategies are necessary for not only human health but also for animal health, aquaculture and plant production. Shortfalls in the present surveillance strategies need to be identified. Raising awareness of the genetic events that promote co-selection of resistance to multiple antimicrobials is an important prerequisite to the design and implementation of molecular surveillance strategies. In this review we will discuss how lateral gene transfer (LGT), driven by the use of low-dose antibiotics in animal husbandry, has likely played a significant role in the evolution of multiple drug resistance (MDR) in Gram-negative bacteria and has complicated molecular surveillance strategies adopted for predicting imminent resistance threats.</p>
</abstract>
<kwd-group><kwd>multi drug resistance</kwd>
<kwd>lateral gene transfer</kwd>
<kwd>bacterial genomes</kwd>
<kwd>complex resistance loci</kwd>
<kwd>Antimicrobial growth promotion</kwd>
</kwd-group>
<counts><fig-count count="0"></fig-count>
<table-count count="1"></table-count>
<equation-count count="0"></equation-count>
<ref-count count="159"></ref-count>
<page-count count="12"></page-count>
<word-count count="11821"></word-count>
</counts>
</article-meta>
</front>
</pmc>
<affiliations><list><country><li>Australie</li>
</country>
</list>
<tree><country name="Australie"><noRegion><name sortKey="Roy Chowdhury, Piklu" sort="Roy Chowdhury, Piklu" uniqKey="Roy Chowdhury P" first="Piklu" last="Roy Chowdhury">Piklu Roy Chowdhury</name>
</noRegion>
<name sortKey="Charles, Ian G" sort="Charles, Ian G" uniqKey="Charles I" first="Ian G." last="Charles">Ian G. Charles</name>
<name sortKey="Djordjevic, Steven P" sort="Djordjevic, Steven P" uniqKey="Djordjevic S" first="Steven P." last="Djordjevic">Steven P. Djordjevic</name>
<name sortKey="Hammond, Jeffrey M" sort="Hammond, Jeffrey M" uniqKey="Hammond J" first="Jeffrey M." last="Hammond">Jeffrey M. Hammond</name>
<name sortKey="Mckinnon, Jessica" sort="Mckinnon, Jessica" uniqKey="Mckinnon J" first="Jessica" last="Mckinnon">Jessica Mckinnon</name>
<name sortKey="Roy Chowdhury, Piklu" sort="Roy Chowdhury, Piklu" uniqKey="Roy Chowdhury P" first="Piklu" last="Roy Chowdhury">Piklu Roy Chowdhury</name>
<name sortKey="Wyrsch, Ethan" sort="Wyrsch, Ethan" uniqKey="Wyrsch E" first="Ethan" last="Wyrsch">Ethan Wyrsch</name>
</country>
</tree>
</affiliations>
</record>
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