High quality draft genome sequence of the heavy metal resistant bacterium Halomonas zincidurans type strain B6T
Identifieur interne : 000381 ( Ncbi/Checkpoint ); précédent : 000380; suivant : 000382High quality draft genome sequence of the heavy metal resistant bacterium Halomonas zincidurans type strain B6T
Auteurs : Ying-Yi Huo [République populaire de Chine] ; Zheng-Yang Li [République populaire de Chine] ; Hong Cheng [République populaire de Chine] ; Chun-Sheng Wang [République populaire de Chine] ; Xue-Wei Xu [République populaire de Chine]Source :
- Standards in Genomic Sciences [ 1944-3277 ] ; 2014.
Abstract
Url:
DOI: 10.1186/1944-3277-9-30
PubMed: 25945155
PubMed Central: 4286145
Affiliations:
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PMC:4286145Le document en format XML
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type strain B6<sup>T</sup>
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<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">High quality draft genome sequence of the heavy metal resistant bacterium <italic>Halomonas zincidurans</italic>
type strain B6<sup>T</sup>
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<author><name sortKey="Huo, Ying Yi" sort="Huo, Ying Yi" uniqKey="Huo Y" first="Ying-Yi" last="Huo">Ying-Yi Huo</name>
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<wicri:regionArea>Laboratory of Marine Ecosystem and Biogeochemistry, Second Institute of Oceanography, State Oceanic Administration, Hangzhou</wicri:regionArea>
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<author><name sortKey="Li, Zheng Yang" sort="Li, Zheng Yang" uniqKey="Li Z" first="Zheng-Yang" last="Li">Zheng-Yang Li</name>
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<wicri:regionArea>Laboratory of Marine Ecosystem and Biogeochemistry, Second Institute of Oceanography, State Oceanic Administration, Hangzhou</wicri:regionArea>
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<author><name sortKey="Cheng, Hong" sort="Cheng, Hong" uniqKey="Cheng H" first="Hong" last="Cheng">Hong Cheng</name>
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<orgName type="university">Université de Zhejiang</orgName>
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<author><name sortKey="Wang, Chun Sheng" sort="Wang, Chun Sheng" uniqKey="Wang C" first="Chun-Sheng" last="Wang">Chun-Sheng Wang</name>
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<wicri:regionArea>Laboratory of Marine Ecosystem and Biogeochemistry, Second Institute of Oceanography, State Oceanic Administration, Hangzhou</wicri:regionArea>
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<author><name sortKey="Xu, Xue Wei" sort="Xu, Xue Wei" uniqKey="Xu X" first="Xue-Wei" last="Xu">Xue-Wei Xu</name>
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<wicri:regionArea>Laboratory of Marine Ecosystem and Biogeochemistry, Second Institute of Oceanography, State Oceanic Administration, Hangzhou</wicri:regionArea>
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<series><title level="j">Standards in Genomic Sciences</title>
<idno type="eISSN">1944-3277</idno>
<imprint><date when="2014">2014</date>
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<front><div type="abstract" xml:lang="en"><p><italic>Halomonas zincidurans</italic>
strain B6<sup>T</sup>
was isolated from a deep-sea heavy metal rich sediment from the South Atlantic Mid-Ocean Ridge. The strain showed significant resistance to heavy metals, especially to zinc. Here we describe the genome sequence and annotation, as well as the features, of the organism. The genome contains 3,325 protein-coding genes (2,848 with predicted functions), 61 tRNA genes and 6 rRNA genes. <italic>H. zincidurans</italic>
strain B6<sup>T</sup>
encodes 31 genes related to heavy metal resistance. And HGT may play an important role in its adaption to the heavy metal rich environment. <italic>H. zincidurans</italic>
strain B6<sup>T</sup>
may have potential applications in the bioremediation of heavy metal-contaminated environments.</p>
</div>
</front>
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</back>
</TEI>
<affiliations><list><country><li>République populaire de Chine</li>
</country>
<region><li>Zhejiang</li>
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<settlement><li>Hangzhou</li>
</settlement>
<orgName><li>Université de Zhejiang</li>
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<tree><country name="République populaire de Chine"><region name="Zhejiang"><name sortKey="Huo, Ying Yi" sort="Huo, Ying Yi" uniqKey="Huo Y" first="Ying-Yi" last="Huo">Ying-Yi Huo</name>
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<name sortKey="Cheng, Hong" sort="Cheng, Hong" uniqKey="Cheng H" first="Hong" last="Cheng">Hong Cheng</name>
<name sortKey="Li, Zheng Yang" sort="Li, Zheng Yang" uniqKey="Li Z" first="Zheng-Yang" last="Li">Zheng-Yang Li</name>
<name sortKey="Wang, Chun Sheng" sort="Wang, Chun Sheng" uniqKey="Wang C" first="Chun-Sheng" last="Wang">Chun-Sheng Wang</name>
<name sortKey="Xu, Xue Wei" sort="Xu, Xue Wei" uniqKey="Xu X" first="Xue-Wei" last="Xu">Xue-Wei Xu</name>
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</tree>
</affiliations>
</record>
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