Five task clusters that enable efficient and effective digitization of biological collections
Identifieur interne : 000137 ( Ncbi/Curation ); précédent : 000136; suivant : 000138Five task clusters that enable efficient and effective digitization of biological collections
Auteurs : Gil Nelson [États-Unis] ; Deborah Paul [États-Unis] ; Gregory Riccardi [États-Unis] ; Austin R. Mast [États-Unis]Source :
- ZooKeys [ 1313-2989 ] ; 2012.
Abstract
This paper describes and illustrates five major clusters of related tasks (herein referred to as
Url:
DOI: 10.3897/zookeys.209.3135
PubMed: 22859876
PubMed Central: 3406464
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Five task clusters that enable efficient and effective digitization of biological collections</title><author><name sortKey="Nelson, Gil" sort="Nelson, Gil" uniqKey="Nelson G" first="Gil" last="Nelson">Gil Nelson</name><affiliation wicri:level="2"><nlm:aff id="A1">Institute for Digital Information, Florida State University, Tallahassee, FL 32306-2100, United States</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Institute for Digital Information, Florida State University, Tallahassee, FL 32306-2100</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Paul, Deborah" sort="Paul, Deborah" uniqKey="Paul D" first="Deborah" last="Paul">Deborah Paul</name><affiliation wicri:level="2"><nlm:aff id="A1">Institute for Digital Information, Florida State University, Tallahassee, FL 32306-2100, United States</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Institute for Digital Information, Florida State University, Tallahassee, FL 32306-2100</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Riccardi, Gregory" sort="Riccardi, Gregory" uniqKey="Riccardi G" first="Gregory" last="Riccardi">Gregory Riccardi</name><affiliation wicri:level="2"><nlm:aff id="A1">Institute for Digital Information, Florida State University, Tallahassee, FL 32306-2100, United States</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Institute for Digital Information, Florida State University, Tallahassee, FL 32306-2100</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Mast, Austin R" sort="Mast, Austin R" uniqKey="Mast A" first="Austin R." last="Mast">Austin R. Mast</name><affiliation wicri:level="2"><nlm:aff id="A2"> Department of Biological Science, Florida State University, Tallahassee, FL 32306-4295, United States</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea> Department of Biological Science, Florida State University, Tallahassee, FL 32306-4295</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">22859876</idno><idno type="pmc">3406464</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3406464</idno><idno type="RBID">PMC:3406464</idno><idno type="doi">10.3897/zookeys.209.3135</idno><date when="2012">2012</date><idno type="wicri:Area/Pmc/Corpus">000199</idno><idno type="wicri:Area/Pmc/Curation">000199</idno><idno type="wicri:Area/Pmc/Checkpoint">000106</idno><idno type="wicri:Area/Ncbi/Merge">000137</idno><idno type="wicri:Area/Ncbi/Curation">000137</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Five task clusters that enable efficient and effective digitization of biological collections</title><author><name sortKey="Nelson, Gil" sort="Nelson, Gil" uniqKey="Nelson G" first="Gil" last="Nelson">Gil Nelson</name><affiliation wicri:level="2"><nlm:aff id="A1">Institute for Digital Information, Florida State University, Tallahassee, FL 32306-2100, United States</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Institute for Digital Information, Florida State University, Tallahassee, FL 32306-2100</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Paul, Deborah" sort="Paul, Deborah" uniqKey="Paul D" first="Deborah" last="Paul">Deborah Paul</name><affiliation wicri:level="2"><nlm:aff id="A1">Institute for Digital Information, Florida State University, Tallahassee, FL 32306-2100, United States</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Institute for Digital Information, Florida State University, Tallahassee, FL 32306-2100</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Riccardi, Gregory" sort="Riccardi, Gregory" uniqKey="Riccardi G" first="Gregory" last="Riccardi">Gregory Riccardi</name><affiliation wicri:level="2"><nlm:aff id="A1">Institute for Digital Information, Florida State University, Tallahassee, FL 32306-2100, United States</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Institute for Digital Information, Florida State University, Tallahassee, FL 32306-2100</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Mast, Austin R" sort="Mast, Austin R" uniqKey="Mast A" first="Austin R." last="Mast">Austin R. Mast</name><affiliation wicri:level="2"><nlm:aff id="A2"> Department of Biological Science, Florida State University, Tallahassee, FL 32306-4295, United States</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea> Department of Biological Science, Florida State University, Tallahassee, FL 32306-4295</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author></analytic><series><title level="j">ZooKeys</title><idno type="ISSN">1313-2989</idno><idno type="eISSN">1313-2970</idno><imprint><date when="2012">2012</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><label>Abstract</label><p>This paper describes and illustrates five major clusters of related tasks (herein referred to as <italic>task clusters</italic>) that are common to efficient and effective practices in the digitization of biological specimen data and media. Examples of these clusters come from the observation of diverse digitization processes. The staff of iDigBio (The U.S. National Science Foundation’s National Resource for Advancing Digitization of Biological Collections) visited active biological and paleontological collections digitization programs for the purpose of documenting and assessing current digitization practices and tools. These observations identified five task clusters that comprise the digitization process leading up to data publication: (1) pre-digitization curation and staging, (2) specimen image capture, (3) specimen image processing, (4) electronic data capture, and (5) georeferencing locality descriptions. While not all institutions are completing each of these task clusters for each specimen, these clusters describe a composite picture of digitization of biological and paleontological specimens across the programs that were observed. We describe these clusters, three workflow patterns that dominate the implemention of these clusters, and offer a set of workflow recommendations for digitization programs.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Antweb" uniqKey="Antweb">Antweb</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Australian, Museum" uniqKey="Australian M">Museum Australian</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bertone, Ma" uniqKey="Bertone M">MA Bertone</name></author><author><name sortKey="Deans, Ar" uniqKey="Deans A">AR Deans</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Blagoderov, V" uniqKey="Blagoderov V">V Blagoderov</name></author><author><name sortKey="Kitching, I" uniqKey="Kitching I">I Kitching</name></author><author><name sortKey="Simonsen, T" uniqKey="Simonsen T">T Simonsen</name></author><author><name sortKey="Smith, Vs" uniqKey="Smith V">VS Smith</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Buffington, Ml" uniqKey="Buffington M">ML Buffington</name></author><author><name sortKey="Burks, Ra" uniqKey="Burks R">RA Burks</name></author><author><name sortKey="Mcneil, L" uniqKey="Mcneil L">L McNeil</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Canhos, Vp" uniqKey="Canhos V">VP Canhos</name></author><author><name sortKey="Souza, S" uniqKey="Souza S">S Souza</name></author><author><name sortKey="Giovanni, R" uniqKey="Giovanni R">R. 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