Serveur d'exploration sur la recherche en informatique en Lorraine

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Linked Data and Online Classifications to Organise Mined Patterns in Patient Data

Identifieur interne : 000054 ( Pmc/Curation ); précédent : 000053; suivant : 000055

Linked Data and Online Classifications to Organise Mined Patterns in Patient Data

Auteurs : Nicolas Jay [France] ; Mathieu D Quin [Royaume-Uni]

Source :

RBID : PMC:3900210

Abstract

In this paper, we investigate the use of web data resources in medicine, especially through medical classifications made available using the principles of Linked Data, to support the interpretation of patterns mined from patient care trajectories. Interpreting such patterns is naturally a challenge for an analyst, as it requires going through large amounts of results and access to sufficient background knowledge. We employ linked data, especially as exposed through the BioPortal system, to create a navigation structure within the patterns obtained form sequential pattern mining. We show how this approach provides a flexible way to explore data about trajectories of diagnoses and treatments according to different medical classifications.


Url:
PubMed: 24551369
PubMed Central: 3900210

Links toward previous steps (curation, corpus...)


Links to Exploration step

PMC:3900210

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Linked Data and Online Classifications to Organise Mined Patterns in Patient Data</title>
<author>
<name sortKey="Jay, Nicolas" sort="Jay, Nicolas" uniqKey="Jay N" first="Nicolas" last="Jay">Nicolas Jay</name>
<affiliation wicri:level="1">
<nlm:aff id="af1-amia_2013_symposium_681">Université de Lorraine, LORIA, UMR 7503Vandoevre-lès-Nancy, F-54506, France</nlm:aff>
<country xml:lang="fr">France</country>
<wicri:regionArea>Université de Lorraine, LORIA, UMR 7503Vandoevre-lès-Nancy, F-54506</wicri:regionArea>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="af2-amia_2013_symposium_681">CHU de Nancy Nancy, F-54000, France</nlm:aff>
<country xml:lang="fr">France</country>
<wicri:regionArea>CHU de Nancy Nancy, F-54000</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="D Quin, Mathieu" sort="D Quin, Mathieu" uniqKey="D Quin M" first="Mathieu" last="D Quin">Mathieu D Quin</name>
<affiliation wicri:level="1">
<nlm:aff id="af3-amia_2013_symposium_681">Knowledge Media Institute, The Open UniversityWalton Hall, Milton Keynes, MK7 6AA, UK</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Knowledge Media Institute, The Open UniversityWalton Hall, Milton Keynes, MK7 6AA</wicri:regionArea>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PMC</idno>
<idno type="pmid">24551369</idno>
<idno type="pmc">3900210</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3900210</idno>
<idno type="RBID">PMC:3900210</idno>
<date when="2013">2013</date>
<idno type="wicri:Area/Pmc/Corpus">000054</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000054</idno>
<idno type="wicri:Area/Pmc/Curation">000054</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000054</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en" level="a" type="main">Linked Data and Online Classifications to Organise Mined Patterns in Patient Data</title>
<author>
<name sortKey="Jay, Nicolas" sort="Jay, Nicolas" uniqKey="Jay N" first="Nicolas" last="Jay">Nicolas Jay</name>
<affiliation wicri:level="1">
<nlm:aff id="af1-amia_2013_symposium_681">Université de Lorraine, LORIA, UMR 7503Vandoevre-lès-Nancy, F-54506, France</nlm:aff>
<country xml:lang="fr">France</country>
<wicri:regionArea>Université de Lorraine, LORIA, UMR 7503Vandoevre-lès-Nancy, F-54506</wicri:regionArea>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="af2-amia_2013_symposium_681">CHU de Nancy Nancy, F-54000, France</nlm:aff>
<country xml:lang="fr">France</country>
<wicri:regionArea>CHU de Nancy Nancy, F-54000</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="D Quin, Mathieu" sort="D Quin, Mathieu" uniqKey="D Quin M" first="Mathieu" last="D Quin">Mathieu D Quin</name>
<affiliation wicri:level="1">
<nlm:aff id="af3-amia_2013_symposium_681">Knowledge Media Institute, The Open UniversityWalton Hall, Milton Keynes, MK7 6AA, UK</nlm:aff>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Knowledge Media Institute, The Open UniversityWalton Hall, Milton Keynes, MK7 6AA</wicri:regionArea>
</affiliation>
</author>
</analytic>
<series>
<title level="j">AMIA Annual Symposium Proceedings</title>
<idno type="eISSN">1942-597X</idno>
<imprint>
<date when="2013">2013</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">
<p>In this paper, we investigate the use of web data resources in medicine, especially through medical classifications made available using the principles of Linked Data, to support the interpretation of patterns mined from patient care trajectories. Interpreting such patterns is naturally a challenge for an analyst, as it requires going through large amounts of results and access to sufficient background knowledge. We employ linked data, especially as exposed through the BioPortal system, to create a navigation structure within the patterns obtained form sequential pattern mining. We show how this approach provides a flexible way to explore data about trajectories of diagnoses and treatments according to different medical classifications.</p>
</div>
</front>
</TEI>
<pmc article-type="research-article">
<pmc-comment>The publisher of this article does not allow downloading of the full text in XML form.</pmc-comment>
<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">AMIA Annu Symp Proc</journal-id>
<journal-title-group>
<journal-title>AMIA Annual Symposium Proceedings</journal-title>
</journal-title-group>
<issn pub-type="epub">1942-597X</issn>
<publisher>
<publisher-name>American Medical Informatics Association</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="pmid">24551369</article-id>
<article-id pub-id-type="pmc">3900210</article-id>
<article-id pub-id-type="publisher-id">amia_2013_symposium_681</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Articles</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>Linked Data and Online Classifications to Organise Mined Patterns in Patient Data</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Jay</surname>
<given-names>Nicolas</given-names>
</name>
<degrees>MD, PhD</degrees>
<xref ref-type="aff" rid="af1-amia_2013_symposium_681">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="af2-amia_2013_symposium_681">
<sup>2</sup>
</xref>
<xref ref-type="corresp" rid="c1-amia_2013_symposium_681"></xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>d’Aquin</surname>
<given-names>Mathieu</given-names>
</name>
<degrees>PhD</degrees>
<xref ref-type="aff" rid="af3-amia_2013_symposium_681">
<sup>3</sup>
</xref>
<xref ref-type="corresp" rid="c2-amia_2013_symposium_681"></xref>
</contrib>
</contrib-group>
<aff id="af1-amia_2013_symposium_681">
<label>1</label>
Université de Lorraine, LORIA, UMR 7503Vandoevre-lès-Nancy, F-54506, France</aff>
<aff id="af2-amia_2013_symposium_681">
<label>2</label>
CHU de Nancy Nancy, F-54000, France</aff>
<aff id="af3-amia_2013_symposium_681">
<label>3</label>
Knowledge Media Institute, The Open UniversityWalton Hall, Milton Keynes, MK7 6AA, UK</aff>
<author-notes>
<corresp id="c1-amia_2013_symposium_681">
<email>nicolas.jay@loria.fr</email>
</corresp>
<corresp id="c2-amia_2013_symposium_681">
<email>mathieu.daquin@open.ac.uk</email>
</corresp>
</author-notes>
<pub-date pub-type="collection">
<year>2013</year>
</pub-date>
<pub-date pub-type="epub">
<day>16</day>
<month>11</month>
<year>2013</year>
</pub-date>
<volume>2013</volume>
<fpage>681</fpage>
<lpage>690</lpage>
<permissions>
<copyright-statement>©2013 AMIA - All rights reserved.</copyright-statement>
<copyright-year>2013</copyright-year>
<license>
<license-p>This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose</license-p>
</license>
</permissions>
<abstract>
<p>In this paper, we investigate the use of web data resources in medicine, especially through medical classifications made available using the principles of Linked Data, to support the interpretation of patterns mined from patient care trajectories. Interpreting such patterns is naturally a challenge for an analyst, as it requires going through large amounts of results and access to sufficient background knowledge. We employ linked data, especially as exposed through the BioPortal system, to create a navigation structure within the patterns obtained form sequential pattern mining. We show how this approach provides a flexible way to explore data about trajectories of diagnoses and treatments according to different medical classifications.</p>
</abstract>
</article-meta>
</front>
</pmc>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Lorraine/explor/InforLorV4/Data/Pmc/Curation
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000054 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Pmc/Curation/biblio.hfd -nk 000054 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Lorraine
   |area=    InforLorV4
   |flux=    Pmc
   |étape=   Curation
   |type=    RBID
   |clé=     PMC:3900210
   |texte=   Linked Data and Online Classifications to Organise Mined Patterns in Patient Data
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Pmc/Curation/RBID.i   -Sk "pubmed:24551369" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Pmc/Curation/biblio.hfd   \
       | NlmPubMed2Wicri -a InforLorV4 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Mon Jun 10 21:56:28 2019. Site generation: Fri Feb 25 15:29:27 2022