Phylogeography of the Arizona hairy scorpion (Hadrurus arizonensis) supports a model of biotic assembly in the Mojave Desert and adds a new Pleistocene refugium
Identifieur interne : 000731 ( Istex/Corpus ); précédent : 000730; suivant : 000732Phylogeography of the Arizona hairy scorpion (Hadrurus arizonensis) supports a model of biotic assembly in the Mojave Desert and adds a new Pleistocene refugium
Auteurs : Matthew R. Graham ; Jef R. Jaeger ; Lorenzo Prendini ; Brett R. RiddleSource :
- Journal of Biogeography [ 0305-0270 ] ; 2013-07.
Abstract
As data accumulate, a multi‐taxon biogeographical synthesis of the Mojave Desert is beginning to emerge. The initial synthesis, which we call the ‘Mojave Assembly Model’, was predominantly based on comparisons of phylogeographical patterns from vertebrate taxa. We tested the predictions of this model by examining the phylogeographical history of Hadrurus arizonensis, a large scorpion from the Mojave and Sonoran deserts.
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DOI: 10.1111/jbi.12079
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<notesStmt><note>Appendix S1 Collection data (Table S1), primers (Table S2), and SAMOVA results (Table S3) from a phylogeographical assessment of Hadrurus arizonensis.Appendix S2 Graphical results from demographic analyses (Fig. S1) and divergence dating (Fig. S2) from a phylogeographical assessment of Hadrurus arizonensis.</note>
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<abstract><p>As data accumulate, a multi‐taxon biogeographical synthesis of the Mojave Desert is beginning to emerge. The initial synthesis, which we call the ‘Mojave Assembly Model’, was predominantly based on comparisons of phylogeographical patterns from vertebrate taxa. We tested the predictions of this model by examining the phylogeographical history of Hadrurus arizonensis, a large scorpion from the Mojave and Sonoran deserts.</p>
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<abstract><p>Mojave and Sonoran deserts, United States and Mexico.</p>
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<abstract><p>We sequenced mitochondrial cytochrome c oxidase subunit I (COI) data from 256 samples collected throughout the range of H. arizonensis. We analysed sequence data using a network analysis, spatial analysis of molecular variance (SAMOVA), and a Mantel test. We then used a molecular clock to place the genetic patterns in a temporal framework. We tested for signals of expansion using neutrality tests, mismatch distributions and Bayesian skyline plots. We used Maxent to develop current and late‐glacial species distribution models from occurrence records and bioclimatic variables.</p>
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<abstract><p>Phylogenetic and structure analyses split the maternal genealogy basally into a southern clade along the coast of Sonora and a northern clade that includes six lineages distributed in the Mojave Desert and northern Sonoran Desert. Molecular dating suggested that the main clades diverged between the late Pliocene and early Pleistocene, whereas subsequent divergences between lineages occurred in the middle and late Pleistocene. Species distribution models predicted that the distribution of suitable climate was reduced and fragmented during the Last Glacial Maximum.</p>
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<abstract><p>Genetic analyses and species distribution modelling suggest that the genetic diversity within H. arizonensis was predominantly structured by Pleistocene climate cycles. These results are generally consistent with the predictions of Pleistocene refugia for arid‐adapted taxa described in the Mojave Assembly Model, but suggest that a northern area of the Lower Colorado River Valley may have acted as an additional refugium during Pleistocene glacial cycles.</p>
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<caption><b>Appendix S1 </b>
Collection data (Table S1), primers (Table S2), and SAMOVA results (Table S3) from a phylogeographical assessment of <i>Hadrurus arizonensis</i>
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Graphical results from demographic analyses (Fig. S1) and divergence dating (Fig. S2) from a phylogeographical assessment of <i>Hadrurus arizonensis</i>
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<section xml:id="jbi12079-sec-0001"><title type="main">Aim</title>
<p>As data accumulate, a multi‐taxon biogeographical synthesis of the <fc>M</fc>
ojave <fc>D</fc>
esert is beginning to emerge. The initial synthesis, which we call the ‘<fc>M</fc>
ojave <fc>A</fc>
ssembly <fc>M</fc>
odel’, was predominantly based on comparisons of phylogeographical patterns from vertebrate taxa. We tested the predictions of this model by examining the phylogeographical history of <i><fc>H</fc>
adrurus arizonensis</i>
, a large scorpion from the <fc>M</fc>
ojave and <fc>S</fc>
onoran deserts.</p>
</section>
<section xml:id="jbi12079-sec-0002"><title type="main">Location</title>
<p>Mojave and <fc>S</fc>
onoran deserts, <fc>U</fc>
nited <fc>S</fc>
tates and <fc>M</fc>
exico.</p>
</section>
<section xml:id="jbi12079-sec-0003"><title type="main">Methods</title>
<p>We sequenced mitochondrial cytochrome <i>c</i>
oxidase subunit I (<i>COI</i>
) data from 256 samples collected throughout the range of <i>H. arizonensis</i>
. We analysed sequence data using a network analysis, spatial analysis of molecular variance (SAMOVA), and a <fc>M</fc>
antel test. We then used a molecular clock to place the genetic patterns in a temporal framework. We tested for signals of expansion using neutrality tests, mismatch distributions and <fc>B</fc>
ayesian skyline plots. We used <sc>Maxent</sc>
to develop current and late‐glacial species distribution models from occurrence records and bioclimatic variables.</p>
</section>
<section xml:id="jbi12079-sec-0004"><title type="main">Results</title>
<p>Phylogenetic and structure analyses split the maternal genealogy basally into a southern clade along the coast of <fc>S</fc>
onora and a northern clade that includes six lineages distributed in the <fc>M</fc>
ojave <fc>D</fc>
esert and northern <fc>S</fc>
onoran <fc>D</fc>
esert. Molecular dating suggested that the main clades diverged between the late <fc>P</fc>
liocene and early <fc>P</fc>
leistocene, whereas subsequent divergences between lineages occurred in the middle and late <fc>P</fc>
leistocene. Species distribution models predicted that the distribution of suitable climate was reduced and fragmented during the <fc>L</fc>
ast <fc>G</fc>
lacial <fc>M</fc>
aximum.</p>
</section>
<section xml:id="jbi12079-sec-0005"><title type="main">Main conclusions</title>
<p>Genetic analyses and species distribution modelling suggest that the genetic diversity within <i>H. arizonensis</i>
was predominantly structured by <fc>P</fc>
leistocene climate cycles. These results are generally consistent with the predictions of <fc>P</fc>
leistocene refugia for arid‐adapted taxa described in the <fc>M</fc>
ojave <fc>A</fc>
ssembly <fc>M</fc>
odel, but suggest that a northern area of the <fc>L</fc>
ower <fc>C</fc>
olorado <fc>R</fc>
iver <fc>V</fc>
alley may have acted as an additional refugium during <fc>P</fc>
leistocene glacial cycles.</p>
</section>
</abstract>
</abstractGroup>
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<mods version="3.6"><titleInfo lang="en"><title>Phylogeography of the Arizona hairy scorpion (Hadrurus arizonensis) supports a model of biotic assembly in the Mojave Desert and adds a new Pleistocene refugium</title>
</titleInfo>
<titleInfo type="alternative" contentType="CDATA" lang="en"><title>Phylogeography of the Arizona hairy scorpion (Hadrurus arizonensis) supports a model of biotic assembly in the Mojave Desert and adds a new Pleistocene refugium</title>
</titleInfo>
<name type="personal"><namePart type="given">Matthew R.</namePart>
<namePart type="family">Graham</namePart>
<affiliation>School of Life Sciences, University of Nevada, NV, 89154‐4004, Las Vegas, USA</affiliation>
<affiliation>Correspondence: Matthew R. Graham, School of Life Sciences, University of Nevada, Las Vegas, 4505 South Maryland Parkway, Las Vegas, NV 89154‐4004, USA.E‐mail:</affiliation>
<affiliation>E-mail: matthew.graham@unlv.edu</affiliation>
<role><roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal"><namePart type="given">Jef R.</namePart>
<namePart type="family">Jaeger</namePart>
<affiliation>School of Life Sciences, University of Nevada, NV, 89154‐4004, Las Vegas, USA</affiliation>
<role><roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal"><namePart type="given">Lorenzo</namePart>
<namePart type="family">Prendini</namePart>
<affiliation>Division of Invertebrate Zoology, American Museum of Natural History, NY, 10024‐5192, New York, USA</affiliation>
<role><roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal"><namePart type="given">Brett R.</namePart>
<namePart type="family">Riddle</namePart>
<affiliation>School of Life Sciences, University of Nevada, NV, 89154‐4004, Las Vegas, USA</affiliation>
<role><roleTerm type="text">author</roleTerm>
</role>
</name>
<name type="personal"><namePart type="given">Melodie</namePart>
<namePart type="family">McGeoch</namePart>
<role><roleTerm type="text">editor</roleTerm>
</role>
</name>
<typeOfResource>text</typeOfResource>
<genre type="article" displayLabel="article"></genre>
<originInfo><publisher>Blackwell Publishing Ltd</publisher>
<dateIssued encoding="w3cdtf">2013-07</dateIssued>
<dateCreated encoding="w3cdtf">2012-12-29</dateCreated>
<copyrightDate encoding="w3cdtf">2013</copyrightDate>
</originInfo>
<language><languageTerm type="code" authority="rfc3066">en</languageTerm>
<languageTerm type="code" authority="iso639-2b">eng</languageTerm>
</language>
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</physicalDescription>
<abstract>As data accumulate, a multi‐taxon biogeographical synthesis of the Mojave Desert is beginning to emerge. The initial synthesis, which we call the ‘Mojave Assembly Model’, was predominantly based on comparisons of phylogeographical patterns from vertebrate taxa. We tested the predictions of this model by examining the phylogeographical history of Hadrurus arizonensis, a large scorpion from the Mojave and Sonoran deserts.</abstract>
<abstract>Mojave and Sonoran deserts, United States and Mexico.</abstract>
<abstract>We sequenced mitochondrial cytochrome c oxidase subunit I (COI) data from 256 samples collected throughout the range of H. arizonensis. We analysed sequence data using a network analysis, spatial analysis of molecular variance (SAMOVA), and a Mantel test. We then used a molecular clock to place the genetic patterns in a temporal framework. We tested for signals of expansion using neutrality tests, mismatch distributions and Bayesian skyline plots. We used Maxent to develop current and late‐glacial species distribution models from occurrence records and bioclimatic variables.</abstract>
<abstract>Phylogenetic and structure analyses split the maternal genealogy basally into a southern clade along the coast of Sonora and a northern clade that includes six lineages distributed in the Mojave Desert and northern Sonoran Desert. Molecular dating suggested that the main clades diverged between the late Pliocene and early Pleistocene, whereas subsequent divergences between lineages occurred in the middle and late Pleistocene. Species distribution models predicted that the distribution of suitable climate was reduced and fragmented during the Last Glacial Maximum.</abstract>
<abstract>Genetic analyses and species distribution modelling suggest that the genetic diversity within H. arizonensis was predominantly structured by Pleistocene climate cycles. These results are generally consistent with the predictions of Pleistocene refugia for arid‐adapted taxa described in the Mojave Assembly Model, but suggest that a northern area of the Lower Colorado River Valley may have acted as an additional refugium during Pleistocene glacial cycles.</abstract>
<note type="additional physical form">Appendix S1 Collection data (Table S1), primers (Table S2), and SAMOVA results (Table S3) from a phylogeographical assessment of Hadrurus arizonensis.Appendix S2 Graphical results from demographic analyses (Fig. S1) and divergence dating (Fig. S2) from a phylogeographical assessment of Hadrurus arizonensis.</note>
<subject><genre>keywords</genre>
<topic>Biogeography</topic>
<topic>COI</topic>
<topic>Maxent</topic>
<topic>mitochondrial DNA</topic>
<topic>Quaternary</topic>
<topic>Scorpiones</topic>
<topic>Sonoran Desert</topic>
<topic>species distribution modelling</topic>
</subject>
<relatedItem type="host"><titleInfo><title>Journal of Biogeography</title>
</titleInfo>
<titleInfo type="abbreviated"><title>J. Biogeogr.</title>
</titleInfo>
<genre type="journal">journal</genre>
<subject><genre>article-category</genre>
<topic>Original Article</topic>
</subject>
<identifier type="ISSN">0305-0270</identifier>
<identifier type="eISSN">1365-2699</identifier>
<identifier type="DOI">10.1111/(ISSN)1365-2699</identifier>
<identifier type="PublisherID">JBI</identifier>
<part><date>2013</date>
<detail type="volume"><caption>vol.</caption>
<number>40</number>
</detail>
<detail type="issue"><caption>no.</caption>
<number>7</number>
</detail>
<extent unit="pages"><start>1298</start>
<end>1312</end>
<total>15</total>
</extent>
</part>
</relatedItem>
<identifier type="istex">0EBEDEC6B88B33BF85D2B0AA1552F1AED2981311</identifier>
<identifier type="DOI">10.1111/jbi.12079</identifier>
<identifier type="ArticleID">JBI12079</identifier>
<accessCondition type="use and reproduction" contentType="copyright">Copyright © 2013 John Wiley & Sons Ltd© 2013 Blackwell Publishing Ltd</accessCondition>
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