MIPSPlantsDB—plant database resource for integrative and comparative plant genome research
Identifieur interne : 000330 ( Istex/Corpus ); précédent : 000329; suivant : 000331MIPSPlantsDB—plant database resource for integrative and comparative plant genome research
Auteurs : Manuel Spannagl ; Octave Noubibou ; Dirk Haase ; Li Yang ; Heidrun Gundlach ; Tobias Hindemitt ; Kathrin Klee ; Georg Haberer ; Heiko Schoof ; Klaus F. X. MayerSource :
- Nucleic Acids Research [ 0305-1048 ] ; 2007-01.
Abstract
Genome-oriented plant research delivers rapidly increasing amount of plant genome data. Comprehensive and structured information resources are required to structure and communicate genome and associated analytical data for model organisms as well as for crops. The increase in available plant genomic data enables powerful comparative analysis and integrative approaches. PlantsDB aims to provide data and information resources for individual plant species and in addition to build a platform for integrative and comparative plant genome research. PlantsDB is constituted from genome databases for Arabidopsis, Medicago, Lotus, rice, maize and tomato. Complementary data resources for cis elements, repetive elements and extensive cross-species comparisons are implemented. The PlantsDB portal can be reached at .
Url:
DOI: 10.1093/nar/gkl945
Links to Exploration step
ISTEX:4376F25E86073096DF20883304603AA15CD4B41BLe document en format XML
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X." last="Mayer">Klaus F. X. Mayer</name><affiliation><mods:affiliation>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</mods:affiliation></affiliation><affiliation><mods:affiliation>E-mail: K.mayer@gsf.de</mods:affiliation></affiliation></author></analytic><monogr></monogr><series><title level="j">Nucleic Acids Research</title><idno type="ISSN">0305-1048</idno><idno type="eISSN">1362-4962</idno><imprint><publisher>Oxford University Press</publisher><date type="published" when="2007-01">2007-01</date><biblScope unit="volume">35</biblScope><biblScope unit="supplement">suppl_1</biblScope><biblScope unit="page" from="D834">D834</biblScope><biblScope unit="page" to="D840">D840</biblScope></imprint><idno type="ISSN">0305-1048</idno></series><idno type="istex">4376F25E86073096DF20883304603AA15CD4B41B</idno><idno type="DOI">10.1093/nar/gkl945</idno></biblStruct></sourceDesc><seriesStmt><idno type="ISSN">0305-1048</idno></seriesStmt></fileDesc><profileDesc><textClass></textClass><langUsage><language ident="en">en</language></langUsage></profileDesc></teiHeader><front><div type="abstract">Genome-oriented plant research delivers rapidly increasing amount of plant genome data. Comprehensive and structured information resources are required to structure and communicate genome and associated analytical data for model organisms as well as for crops. The increase in available plant genomic data enables powerful comparative analysis and integrative approaches. PlantsDB aims to provide data and information resources for individual plant species and in addition to build a platform for integrative and comparative plant genome research. PlantsDB is constituted from genome databases for Arabidopsis, Medicago, Lotus, rice, maize and tomato. Complementary data resources for cis elements, repetive elements and extensive cross-species comparisons are implemented. The PlantsDB portal can be reached at .</div></front></TEI><istex><corpusName>oup</corpusName><author><json:item><name>Manuel Spannagl</name><affiliations><json:string>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</json:string></affiliations></json:item><json:item><name>Octave Noubibou</name><affiliations><json:string>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</json:string></affiliations></json:item><json:item><name>Dirk Haase</name><affiliations><json:string>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</json:string></affiliations></json:item><json:item><name>Li Yang</name><affiliations><json:string>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</json:string></affiliations></json:item><json:item><name>Heidrun Gundlach</name><affiliations><json:string>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</json:string></affiliations></json:item><json:item><name>Tobias Hindemitt</name><affiliations><json:string>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</json:string></affiliations></json:item><json:item><name>Kathrin Klee</name><affiliations><json:string>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</json:string></affiliations></json:item><json:item><name>Georg Haberer</name><affiliations><json:string>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</json:string></affiliations></json:item><json:item><name>Heiko Schoof</name><affiliations><json:string>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</json:string></affiliations></json:item><json:item><name>Klaus F. 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PlantsDB aims to provide data and information resources for individual plant species and in addition to build a platform for integrative and comparative plant genome research. PlantsDB is constituted from genome databases for Arabidopsis, Medicago, Lotus, rice, maize and tomato. Complementary data resources for cis elements, repetive elements and extensive cross-species comparisons are implemented. 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X.</forename><surname>Mayer</surname></persName><email>K.mayer@gsf.de</email><affiliation>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</affiliation></author></analytic><monogr><title level="j">Nucleic Acids Research</title><idno type="pISSN">0305-1048</idno><idno type="eISSN">1362-4962</idno><imprint><publisher>Oxford University Press</publisher><date type="published" when="2007-01"></date><biblScope unit="volume">35</biblScope><biblScope unit="supplement">suppl_1</biblScope><biblScope unit="page" from="D834">D834</biblScope><biblScope unit="page" to="D840">D840</biblScope></imprint></monogr><idno type="istex">4376F25E86073096DF20883304603AA15CD4B41B</idno><idno type="DOI">10.1093/nar/gkl945</idno></biblStruct></sourceDesc></fileDesc><profileDesc><creation><date>2007-01</date></creation><langUsage><language ident="en">en</language></langUsage><abstract><p>Genome-oriented plant research delivers rapidly increasing amount of plant genome data. Comprehensive and structured information resources are required to structure and communicate genome and associated analytical data for model organisms as well as for crops. The increase in available plant genomic data enables powerful comparative analysis and integrative approaches. PlantsDB aims to provide data and information resources for individual plant species and in addition to build a platform for integrative and comparative plant genome research. PlantsDB is constituted from genome databases for Arabidopsis, Medicago, Lotus, rice, maize and tomato. Complementary data resources for cis elements, repetive elements and extensive cross-species comparisons are implemented. The PlantsDB portal can be reached at .</p></abstract><textClass><keywords scheme="keyword"><list><item><term>Articles</term></item></list></keywords></textClass></profileDesc><revisionDesc><change when="2007-01">Created</change><change when="2007-01">Published</change><change xml:id="refBibs-istex" who="#ISTEX-API" when="2016-3-14">References added</change><change xml:id="refBibs-istex" who="#ISTEX-API" when="2016-3-21">References added</change><change xml:id="refBibs-istex" who="#ISTEX-API" when="2016-07-27">References added</change></revisionDesc></teiHeader></istex:fulltextTEI><json:item><original>false</original><mimetype>text/plain</mimetype><extension>txt</extension><uri>https://api.istex.fr/document/4376F25E86073096DF20883304603AA15CD4B41B/fulltext/txt</uri></json:item></fulltext><metadata><istex:metadataXml wicri:clean="corpus oup" wicri:toSee="no header"><istex:docType PUBLIC="-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" URI="journalpublishing.dtd" name="istex:docType"></istex:docType><istex:document><article article-type="research-article"><front><journal-meta><journal-id journal-id-type="hwp">nar</journal-id><journal-id journal-id-type="publisher-id">nar</journal-id><journal-id journal-id-type="pmc">nar</journal-id><journal-title>Nucleic Acids Research</journal-title><issn pub-type="epub">1362-4962</issn><issn pub-type="ppub">0305-1048</issn><publisher><publisher-name>Oxford University Press</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.1093/nar/gkl945</article-id><article-categories><subj-group><subject>Articles</subject></subj-group></article-categories><title-group><article-title>MIPSPlantsDB—plant database resource for integrative and comparative plant genome research</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Spannagl</surname><given-names>Manuel</given-names></name></contrib><contrib contrib-type="author"><name><surname>Noubibou</surname><given-names>Octave</given-names></name></contrib><contrib contrib-type="author"><name><surname>Haase</surname><given-names>Dirk</given-names></name></contrib><contrib contrib-type="author"><name><surname>Yang</surname><given-names>Li</given-names></name></contrib><contrib contrib-type="author"><name><surname>Gundlach</surname><given-names>Heidrun</given-names></name></contrib><contrib contrib-type="author"><name><surname>Hindemitt</surname><given-names>Tobias</given-names></name></contrib><contrib contrib-type="author"><name><surname>Klee</surname><given-names>Kathrin</given-names></name></contrib><contrib contrib-type="author"><name><surname>Haberer</surname><given-names>Georg</given-names></name></contrib><contrib contrib-type="author"><name><surname>Schoof</surname><given-names>Heiko</given-names></name></contrib><contrib contrib-type="author"><name><surname>Mayer</surname><given-names>Klaus F. X.</given-names></name><xref ref-type="corresp" rid="cor1">*</xref></contrib><aff><institution>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg</institution> <addr-line>Germany</addr-line></aff></contrib-group><author-notes><corresp id="cor1"><sup>*</sup>To whom correspondence should be addressed. Tel: +49 89 3187 3584; Fax: +49 89 3187 3585; Email: <email>K.mayer@gsf.de</email></corresp><fn><p>Present addresses: Dirk Haase, Max Planck Institute for Plant Breeding Research, Carl-von-Linne Weg 10, 50829 Köln, Germany</p></fn><fn><p>Heiko Schoof, Max Planck Institute for Plant Breeding Research, Carl-von-Linne Weg 10, 50829 Köln, Germany</p></fn></author-notes><pub-date pub-type="collection"><month>1</month><year>2007</year></pub-date><pub-date pub-type="epub"><month>1</month><year>2007</year></pub-date><volume>35</volume><issue>suppl_1</issue><fpage>D834</fpage><lpage>D840</lpage><history><date date-type="received"><day>15</day><month>8</month><year>2006</year></date><date date-type="rev-recd"><day>18</day><month>10</month><year>2006</year></date><date date-type="accepted"><day>20</day><month>10</month><year>2006</year></date></history><copyright-statement>© 2006 The Author(s)</copyright-statement><copyright-year>2006</copyright-year><license license-type="openaccess"><p>This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.</p></license><abstract><p>Genome-oriented plant research delivers rapidly increasing amount of plant genome data. Comprehensive and structured information resources are required to structure and communicate genome and associated analytical data for model organisms as well as for crops. The increase in available plant genomic data enables powerful comparative analysis and integrative approaches. PlantsDB aims to provide data and information resources for individual plant species and in addition to build a platform for integrative and comparative plant genome research. PlantsDB is constituted from genome databases for <italic>Arabidopsis</italic>, <italic>Medicago</italic>, <italic>Lotus</italic>, rice, maize and tomato. Complementary data resources for <italic>cis</italic> elements, repetive elements and extensive cross-species comparisons are implemented. The PlantsDB portal can be reached at <ext-link ext-link-type="uri" xlink:href="http://mips.gsf.de/projects/plants"></ext-link>.</p></abstract></article-meta></front></article></istex:document></istex:metadataXml><mods version="3.6"><titleInfo><title>MIPSPlantsDB—plant database resource for integrative and comparative plant genome research</title></titleInfo><titleInfo type="alternative" contentType="CDATA"><title>MIPSPlantsDB—plant database resource for integrative and comparative plant genome research</title></titleInfo><name type="personal"><namePart type="given">Manuel</namePart><namePart type="family">Spannagl</namePart><affiliation>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</affiliation><role><roleTerm type="text">author</roleTerm></role></name><name type="personal"><namePart type="given">Octave</namePart><namePart type="family">Noubibou</namePart><affiliation>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</affiliation><role><roleTerm type="text">author</roleTerm></role></name><name type="personal"><namePart type="given">Dirk</namePart><namePart type="family">Haase</namePart><affiliation>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</affiliation><role><roleTerm type="text">author</roleTerm></role></name><name type="personal"><namePart type="given">Li</namePart><namePart type="family">Yang</namePart><affiliation>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</affiliation><role><roleTerm type="text">author</roleTerm></role></name><name type="personal"><namePart type="given">Heidrun</namePart><namePart type="family">Gundlach</namePart><affiliation>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</affiliation><role><roleTerm type="text">author</roleTerm></role></name><name type="personal"><namePart type="given">Tobias</namePart><namePart type="family">Hindemitt</namePart><affiliation>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</affiliation><role><roleTerm type="text">author</roleTerm></role></name><name type="personal"><namePart type="given">Kathrin</namePart><namePart type="family">Klee</namePart><affiliation>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</affiliation><role><roleTerm type="text">author</roleTerm></role></name><name type="personal"><namePart type="given">Georg</namePart><namePart type="family">Haberer</namePart><affiliation>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</affiliation><role><roleTerm type="text">author</roleTerm></role></name><name type="personal"><namePart type="given">Heiko</namePart><namePart type="family">Schoof</namePart><affiliation>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</affiliation><role><roleTerm type="text">author</roleTerm></role></name><name type="personal"><namePart type="given">Klaus F. X.</namePart><namePart type="family">Mayer</namePart><affiliation>MIPS, Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstr. 1 85764 Neuherberg, Germany</affiliation><affiliation>E-mail: K.mayer@gsf.de</affiliation><role><roleTerm type="text">author</roleTerm></role></name><typeOfResource>text</typeOfResource><genre type="research-article" displayLabel="research-article"></genre><subject><topic>Articles</topic></subject><originInfo><publisher>Oxford University Press</publisher><dateIssued encoding="w3cdtf">2007-01</dateIssued><dateCreated encoding="w3cdtf">2007-01</dateCreated><copyrightDate encoding="w3cdtf">2007</copyrightDate></originInfo><language><languageTerm type="code" authority="iso639-2b">eng</languageTerm><languageTerm type="code" authority="rfc3066">en</languageTerm></language><physicalDescription><internetMediaType>text/html</internetMediaType></physicalDescription><abstract>Genome-oriented plant research delivers rapidly increasing amount of plant genome data. Comprehensive and structured information resources are required to structure and communicate genome and associated analytical data for model organisms as well as for crops. The increase in available plant genomic data enables powerful comparative analysis and integrative approaches. PlantsDB aims to provide data and information resources for individual plant species and in addition to build a platform for integrative and comparative plant genome research. PlantsDB is constituted from genome databases for Arabidopsis, Medicago, Lotus, rice, maize and tomato. Complementary data resources for cis elements, repetive elements and extensive cross-species comparisons are implemented. The PlantsDB portal can be reached at .</abstract><note type="footnotes">Present addresses: Dirk Haase, Max Planck Institute for Plant Breeding Research, Carl-von-Linne Weg 10, 50829 Köln, Germany</note><relatedItem type="host"><titleInfo><title>Nucleic Acids Research</title></titleInfo><genre type="journal">journal</genre><identifier type="ISSN">0305-1048</identifier><identifier type="eISSN">1362-4962</identifier><identifier type="PublisherID">nar</identifier><identifier type="PublisherID-hwp">nar</identifier><part><date>2007</date><detail type="volume"><caption>vol.</caption><number>35</number></detail><detail type="supplement"><number>suppl_1</number></detail><extent unit="pages"><start>D834</start><end>D840</end></extent></part></relatedItem><identifier type="istex">4376F25E86073096DF20883304603AA15CD4B41B</identifier><identifier type="DOI">10.1093/nar/gkl945</identifier><accessCondition type="use and reproduction" contentType="copyright">© 2006 The Author(s)</accessCondition><recordInfo><recordContentSource>OUP</recordContentSource></recordInfo></mods></metadata><covers><json:item><original>true</original><mimetype>image/tiff</mimetype><extension>tiff</extension><uri>https://api.istex.fr/document/4376F25E86073096DF20883304603AA15CD4B41B/covers/tiff</uri></json:item><json:item><original>true</original><mimetype>text/html</mimetype><extension>html</extension><uri>https://api.istex.fr/document/4376F25E86073096DF20883304603AA15CD4B41B/covers/html</uri></json:item></covers><annexes><json:item><original>true</original><mimetype>image/jpeg</mimetype><extension>jpeg</extension><uri>https://api.istex.fr/document/4376F25E86073096DF20883304603AA15CD4B41B/annexes/jpeg</uri></json:item><json:item><original>true</original><mimetype>image/gif</mimetype><extension>gif</extension><uri>https://api.istex.fr/document/4376F25E86073096DF20883304603AA15CD4B41B/annexes/gif</uri></json:item></annexes><enrichments><istex:catWosTEI uri="https://api.istex.fr/document/4376F25E86073096DF20883304603AA15CD4B41B/enrichments/catWos"><teiHeader><profileDesc><textClass><classCode scheme="WOS">BIOCHEMISTRY & MOLECULAR BIOLOGY</classCode></textClass></profileDesc></teiHeader></istex:catWosTEI><json:item><type>refBibs</type><uri>https://api.istex.fr/document/4376F25E86073096DF20883304603AA15CD4B41B/enrichments/refBibs</uri></json:item></enrichments><serie></serie></istex></record>Pour manipuler ce document sous Unix (Dilib)
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