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Haptically assisted connection procedure for the reconstruction of dendritic spines.

Identifieur interne : 002352 ( PubMed/Checkpoint ); précédent : 002351; suivant : 002353

Haptically assisted connection procedure for the reconstruction of dendritic spines.

Auteurs : Loic Corenthy ; Marcos Garcia ; Sofia Bayona ; Andrea Santuy ; Jose San Martin ; Ruth Benavides-Piccione ; Javier Defelipe ; Luis Pastor

Source :

IEEE transactions on haptics [ 2329-4051 ]

RBID : pubmed:25203994

English descriptors

KwdEn :
- Adult, Algorithms, Dendritic Spines, Feedback, Physiological, Female, Humans, Image Processing, Computer-Assisted (methods), Imaging, Three-Dimensional, Male, Microscopy, Polarization, Software, Touch (physiology), User-Computer Interface, Young Adult.
MESH :
- methods : Image Processing, Computer-Assisted.
- physiology : Touch.
- Adult, Algorithms, Dendritic Spines, Feedback, Physiological, Female, Humans, Imaging, Three-Dimensional, Male, Microscopy, Polarization, Software, User-Computer Interface, Young Adult.

Abstract

Dendritic spines are thin protrusions that cover the dendritic surface of numerous neurons in the brain and whose function seems to play a key role in neural circuits. The correct segmentation of those structures is difficult due to their small size and the resulting spines can appear incomplete. This paper presents a four-step procedure for the complete reconstruction of dendritic spines. The haptically driven procedure is intended to work as an image processing stage before the automatic segmentation step giving the final representation of the dendritic spines. The procedure is designed to allow both the navigation and the volume image editing to be carried out using a haptic device. A use case employing our procedure together with a commercial software package for the segmentation stage is illustrated. Finally, the haptic editing is evaluated in two experiments; the first experiment concerns the benefits of the force feedback and the second checks the suitability of the use of a haptic device as input. In both cases, the results shows that the procedure improves the editing accuracy.

DOI: 10.1109/TOH.2014.2354041
PubMed: 25203994

Affiliations:

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Le document en format XML

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<author><name sortKey="Corenthy, Loic" sort="Corenthy, Loic" uniqKey="Corenthy L" first="Loic" last="Corenthy">Loic Corenthy</name>
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<author><name sortKey="Garcia, Marcos" sort="Garcia, Marcos" uniqKey="Garcia M" first="Marcos" last="Garcia">Marcos Garcia</name>
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<author><name sortKey="Bayona, Sofia" sort="Bayona, Sofia" uniqKey="Bayona S" first="Sofia" last="Bayona">Sofia Bayona</name>
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<author><name sortKey="Santuy, Andrea" sort="Santuy, Andrea" uniqKey="Santuy A" first="Andrea" last="Santuy">Andrea Santuy</name>
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<author><name sortKey="Martin, Jose San" sort="Martin, Jose San" uniqKey="Martin J" first="Jose San" last="Martin">Jose San Martin</name>
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<author><name sortKey="Benavides Piccione, Ruth" sort="Benavides Piccione, Ruth" uniqKey="Benavides Piccione R" first="Ruth" last="Benavides-Piccione">Ruth Benavides-Piccione</name>
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<front><div type="abstract" xml:lang="en">Dendritic spines are thin protrusions that cover the dendritic surface of numerous neurons in the brain and whose function seems to play a key role in neural circuits. The correct segmentation of those structures is difficult due to their small size and the resulting spines can appear incomplete. This paper presents a four-step procedure for the complete reconstruction of dendritic spines. The haptically driven procedure is intended to work as an image processing stage before the automatic segmentation step giving the final representation of the dendritic spines. The procedure is designed to allow both the navigation and the volume image editing to be carried out using a haptic device. A use case employing our procedure together with a commercial software package for the segmentation stage is illustrated. Finally, the haptic editing is evaluated in two experiments; the first experiment concerns the benefits of the force feedback and the second checks the suitability of the use of a haptic device as input. In both cases, the results shows that the procedure improves the editing accuracy.</div>
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<Title>IEEE transactions on haptics</Title>
<ISOAbbreviation>IEEE Trans Haptics</ISOAbbreviation>
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<ArticleTitle>Haptically assisted connection procedure for the reconstruction of dendritic spines.</ArticleTitle>
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<Abstract><AbstractText>Dendritic spines are thin protrusions that cover the dendritic surface of numerous neurons in the brain and whose function seems to play a key role in neural circuits. The correct segmentation of those structures is difficult due to their small size and the resulting spines can appear incomplete. This paper presents a four-step procedure for the complete reconstruction of dendritic spines. The haptically driven procedure is intended to work as an image processing stage before the automatic segmentation step giving the final representation of the dendritic spines. The procedure is designed to allow both the navigation and the volume image editing to be carried out using a haptic device. A use case employing our procedure together with a commercial software package for the segmentation stage is illustrated. Finally, the haptic editing is evaluated in two experiments; the first experiment concerns the benefits of the force feedback and the second checks the suitability of the use of a haptic device as input. In both cases, the results shows that the procedure improves the editing accuracy.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Corenthy</LastName>
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<Author ValidYN="Y"><LastName>Pastor</LastName>
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<tree><noCountry><name sortKey="Bayona, Sofia" sort="Bayona, Sofia" uniqKey="Bayona S" first="Sofia" last="Bayona">Sofia Bayona</name>
<name sortKey="Benavides Piccione, Ruth" sort="Benavides Piccione, Ruth" uniqKey="Benavides Piccione R" first="Ruth" last="Benavides-Piccione">Ruth Benavides-Piccione</name>
<name sortKey="Corenthy, Loic" sort="Corenthy, Loic" uniqKey="Corenthy L" first="Loic" last="Corenthy">Loic Corenthy</name>
<name sortKey="Defelipe, Javier" sort="Defelipe, Javier" uniqKey="Defelipe J" first="Javier" last="Defelipe">Javier Defelipe</name>
<name sortKey="Garcia, Marcos" sort="Garcia, Marcos" uniqKey="Garcia M" first="Marcos" last="Garcia">Marcos Garcia</name>
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Haptically assisted connection procedure for the reconstruction of dendritic spines.

Haptically assisted connection procedure for the reconstruction of dendritic spines.

Source :

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Links to Exploration step

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki