A novel pancoronavirus RT-PCR assay: frequent detection of human coronavirus NL63 in children hospitalized with respiratory tract infections in Belgium.
Identifieur interne : 002910 ( PubMed/Curation ); précédent : 002909; suivant : 002911A novel pancoronavirus RT-PCR assay: frequent detection of human coronavirus NL63 in children hospitalized with respiratory tract infections in Belgium.
Auteurs : Elien Moës [Belgique] ; Leen Vijgen ; Els Keyaerts ; Kalina Zlateva ; Sandra Li ; Piet Maes ; Krzysztof Pyrc ; Ben Berkhout ; Lia Van Der Hoek ; Marc Van RanstSource :
- BMC infectious diseases [ 1471-2334 ] ; 2005.
Descripteurs français
- KwdFr :
- ARN viral (), Adolescent, Alignement de séquences, Amorces ADN (), Belgique (épidémiologie), Coronavirus (génétique), Coronavirus (isolement et purification), Données de séquences moléculaires, Enfant, Enfant d'âge préscolaire, Femelle, Humains, Incidence, Infections de l'appareil respiratoire (virologie), Infections de l'appareil respiratoire (épidémiologie), Infections à coronavirus (virologie), Infections à coronavirus (épidémiologie), Mâle, Nourrisson, Phylogénie, RT-PCR (), Saisons, Séquence consensus, Séquence nucléotidique.
- MESH :
- génétique : Coronavirus.
- isolement et purification : Coronavirus.
- virologie : Infections de l'appareil respiratoire, Infections à coronavirus.
- épidémiologie : Belgique, Infections de l'appareil respiratoire, Infections à coronavirus.
- ARN viral, Adolescent, Alignement de séquences, Amorces ADN, Données de séquences moléculaires, Enfant, Enfant d'âge préscolaire, Femelle, Humains, Incidence, Mâle, Nourrisson, Phylogénie, RT-PCR, Saisons, Séquence consensus, Séquence nucléotidique.
- Wicri :
- geographic : Belgique.
English descriptors
- KwdEn :
- Adolescent, Base Sequence, Belgium (epidemiology), Child, Child, Preschool, Consensus Sequence, Coronavirus (genetics), Coronavirus (isolation & purification), Coronavirus Infections (epidemiology), Coronavirus Infections (virology), DNA Primers (chemistry), Female, Humans, Incidence, Infant, Male, Molecular Sequence Data, Phylogeny, RNA, Viral (chemistry), Respiratory Tract Infections (epidemiology), Respiratory Tract Infections (virology), Reverse Transcriptase Polymerase Chain Reaction (methods), Seasons, Sequence Alignment.
- MESH :
- chemical , chemistry : DNA Primers, RNA, Viral.
- geographic , epidemiology : Belgium.
- epidemiology : Coronavirus Infections, Respiratory Tract Infections.
- genetics : Coronavirus.
- isolation & purification : Coronavirus.
- methods : Reverse Transcriptase Polymerase Chain Reaction.
- virology : Coronavirus Infections, Respiratory Tract Infections.
- Adolescent, Base Sequence, Child, Child, Preschool, Consensus Sequence, Female, Humans, Incidence, Infant, Male, Molecular Sequence Data, Phylogeny, Seasons, Sequence Alignment.
Abstract
Four human coronaviruses are currently known to infect the respiratory tract: human coronaviruses OC43 (HCoV-OC43) and 229E (HCoV-229E), SARS associated coronavirus (SARS-CoV) and the recently identified human coronavirus NL63 (HCoV-NL63). In this study we explored the incidence of HCoV-NL63 infection in children diagnosed with respiratory tract infections in Belgium.
DOI: 10.1186/1471-2334-5-6
PubMed: 15686594
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nucléotidique</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Belgique</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Four human coronaviruses are currently known to infect the respiratory tract: human coronaviruses OC43 (HCoV-OC43) and 229E (HCoV-229E), SARS associated coronavirus (SARS-CoV) and the recently identified human coronavirus NL63 (HCoV-NL63). In this study we explored the incidence of HCoV-NL63 infection in children diagnosed with respiratory tract infections in Belgium.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">15686594</PMID><DateCompleted><Year>2006</Year><Month>04</Month><Day>20</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1471-2334</ISSN><JournalIssue CitedMedium="Internet"><Volume>5</Volume><PubDate><Year>2005</Year><Month>Feb</Month><Day>01</Day></PubDate></JournalIssue><Title>BMC infectious diseases</Title><ISOAbbreviation>BMC Infect. Dis.</ISOAbbreviation></Journal><ArticleTitle>A novel pancoronavirus RT-PCR assay: frequent detection of human coronavirus NL63 in children hospitalized with respiratory tract infections in Belgium.</ArticleTitle><Pagination><MedlinePgn>6</MedlinePgn></Pagination><Abstract><AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">Four human coronaviruses are currently known to infect the respiratory tract: human coronaviruses OC43 (HCoV-OC43) and 229E (HCoV-229E), SARS associated coronavirus (SARS-CoV) and the recently identified human coronavirus NL63 (HCoV-NL63). In this study we explored the incidence of HCoV-NL63 infection in children diagnosed with respiratory tract infections in Belgium.</AbstractText><AbstractText Label="METHODS" NlmCategory="METHODS">Samples from children hospitalized with respiratory diseases during the winter seasons of 2003 and 2004 were evaluated for the presence of HCoV-NL63 using a optimized pancoronavirus RT-PCR assay.</AbstractText><AbstractText Label="RESULTS" NlmCategory="RESULTS">Seven HCoV-NL63 positive samples were identified, six were collected during January/February 2003 and one at the end of February 2004.</AbstractText><AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">Our results support the notation that HCoV-NL63 can cause serious respiratory symptoms in children. Sequence analysis of the S gene showed that our isolates could be classified into two subtypes corresponding to the two prototype HCoV-NL63 sequences isolated in The Netherlands in 1988 and 2003, indicating that these two subtypes may currently be cocirculating.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Moës</LastName><ForeName>Elien</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Laboratory of Clinical & Epidemiological Virology, Department of Microbiology & Immunology, Rega Institute for Medical Research, University of Leuven, Belgium. elien.moes@uz.kuleuven.ac.be</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Vijgen</LastName><ForeName>Leen</ForeName><Initials>L</Initials></Author><Author ValidYN="Y"><LastName>Keyaerts</LastName><ForeName>Els</ForeName><Initials>E</Initials></Author><Author ValidYN="Y"><LastName>Zlateva</LastName><ForeName>Kalina</ForeName><Initials>K</Initials></Author><Author ValidYN="Y"><LastName>Li</LastName><ForeName>Sandra</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Maes</LastName><ForeName>Piet</ForeName><Initials>P</Initials></Author><Author ValidYN="Y"><LastName>Pyrc</LastName><ForeName>Krzysztof</ForeName><Initials>K</Initials></Author><Author ValidYN="Y"><LastName>Berkhout</LastName><ForeName>Ben</ForeName><Initials>B</Initials></Author><Author ValidYN="Y"><LastName>van der Hoek</LastName><ForeName>Lia</ForeName><Initials>L</Initials></Author><Author ValidYN="Y"><LastName>Van Ranst</LastName><ForeName>Marc</ForeName><Initials>M</Initials></Author></AuthorList><Language>eng</Language><DataBankList 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UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2005</Year><Month>02</Month><Day>01</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>BMC Infect Dis</MedlineTA><NlmUniqueID>100968551</NlmUniqueID><ISSNLinking>1471-2334</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D017931">DNA Primers</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012367">RNA, Viral</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000293" MajorTopicYN="N">Adolescent</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D001483" MajorTopicYN="N">Base Sequence</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D001530" MajorTopicYN="N" Type="Geographic">Belgium</DescriptorName><QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002648" MajorTopicYN="N">Child</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D002675" MajorTopicYN="N">Child, Preschool</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016384" MajorTopicYN="N">Consensus Sequence</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017934" MajorTopicYN="N">Coronavirus</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018352" MajorTopicYN="N">Coronavirus Infections</DescriptorName><QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName><QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017931" 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