Evidence of the recombinant origin of a bat severe acute respiratory syndrome (SARS)-like coronavirus and its implications on the direct ancestor of SARS coronavirus.
Identifieur interne : 001C60 ( PubMed/Curation ); précédent : 001C59; suivant : 001C61Evidence of the recombinant origin of a bat severe acute respiratory syndrome (SARS)-like coronavirus and its implications on the direct ancestor of SARS coronavirus.
Auteurs : Chung-Chau Hon [République populaire de Chine] ; Tsan-Yuk Lam ; Zheng-Li Shi ; Alexei J. Drummond ; Chi-Wai Yip ; Fanya Zeng ; Pui-Yi Lam ; Frederick Chi-Ching LeungSource :
- Journal of virology [ 1098-5514 ] ; 2008.
Descripteurs français
- KwdFr :
- MESH :
- génétique : Génome viral, Virus du SRAS.
- isolement et purification : Virus du SRAS.
- virologie : Chiroptera.
- Animaux, Données de séquences moléculaires, Modèles génétiques, Phylogénie, Recombinaison génétique, Séquence nucléotidique, Théorème de Bayes, Virus du SRAS.
English descriptors
- KwdEn :
- MESH :
- classification : SARS Virus.
- genetics : Genome, Viral, SARS Virus.
- isolation & purification : SARS Virus.
- virology : Chiroptera.
- Animals, Base Sequence, Bayes Theorem, Models, Genetic, Molecular Sequence Data, Phylogeny, Recombination, Genetic.
Abstract
Bats have been identified as the natural reservoir of severe acute respiratory syndrome (SARS)-like and SARS coronaviruses (SLCoV and SCoV). However, previous studies suggested that none of the currently sampled bat SLCoVs is the descendant of the direct ancestor of SCoV, based on their relatively distant phylogenetic relationship. In this study, evidence of the recombinant origin of the genome of a bat SLCoV is demonstrated. We identified a potential recombination breakpoint immediately after the consensus intergenic sequence between open reading frame 1 and the S coding region, suggesting the replication intermediates may participate in the recombination event, as previously speculated for other CoVs. Phylogenetic analysis of its parental regions suggests the presence of an uncharacterized SLCoV lineage that is phylogenetically closer to SCoVs than any of the currently sampled bat SLCoVs. Using various Bayesian molecular-clock models, interspecies transfer of this SLCoV lineage from bats to the amplifying host (e.g., civets) was estimated to have happened a median of 4.08 years before the SARS outbreak. Based on this relatively short window period, we speculate that this uncharacterized SLCoV lineage may contain the direct ancestor of SCoV. This study sheds light on the possible host bat species of the direct ancestor of SCoV, providing valuable information on the scope and focus of surveillance for the origin of SCoV.
DOI: 10.1128/JVI.01926-07
PubMed: 18057240
Links toward previous steps (curation, corpus...)
- to stream PubMed, to step Corpus: Pour aller vers cette notice dans l'étape Curation :001C60
Links to Exploration step
pubmed:18057240Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Evidence of the recombinant origin of a bat severe acute respiratory syndrome (SARS)-like coronavirus and its implications on the direct ancestor of SARS coronavirus.</title>
<author><name sortKey="Hon, Chung Chau" sort="Hon, Chung Chau" uniqKey="Hon C" first="Chung-Chau" last="Hon">Chung-Chau Hon</name>
<affiliation wicri:level="1"><nlm:affiliation>5N-12, Kadoorie Biological Science Building, The University of Hong Kong, Hong Kong, China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>5N-12, Kadoorie Biological Science Building, The University of Hong Kong, Hong Kong</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Lam, Tsan Yuk" sort="Lam, Tsan Yuk" uniqKey="Lam T" first="Tsan-Yuk" last="Lam">Tsan-Yuk Lam</name>
</author>
<author><name sortKey="Shi, Zheng Li" sort="Shi, Zheng Li" uniqKey="Shi Z" first="Zheng-Li" last="Shi">Zheng-Li Shi</name>
</author>
<author><name sortKey="Drummond, Alexei J" sort="Drummond, Alexei J" uniqKey="Drummond A" first="Alexei J" last="Drummond">Alexei J. Drummond</name>
</author>
<author><name sortKey="Yip, Chi Wai" sort="Yip, Chi Wai" uniqKey="Yip C" first="Chi-Wai" last="Yip">Chi-Wai Yip</name>
</author>
<author><name sortKey="Zeng, Fanya" sort="Zeng, Fanya" uniqKey="Zeng F" first="Fanya" last="Zeng">Fanya Zeng</name>
</author>
<author><name sortKey="Lam, Pui Yi" sort="Lam, Pui Yi" uniqKey="Lam P" first="Pui-Yi" last="Lam">Pui-Yi Lam</name>
</author>
<author><name sortKey="Leung, Frederick Chi Ching" sort="Leung, Frederick Chi Ching" uniqKey="Leung F" first="Frederick Chi-Ching" last="Leung">Frederick Chi-Ching Leung</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2008">2008</date>
<idno type="RBID">pubmed:18057240</idno>
<idno type="pmid">18057240</idno>
<idno type="doi">10.1128/JVI.01926-07</idno>
<idno type="wicri:Area/PubMed/Corpus">001C60</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001C60</idno>
<idno type="wicri:Area/PubMed/Curation">001C60</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001C60</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Evidence of the recombinant origin of a bat severe acute respiratory syndrome (SARS)-like coronavirus and its implications on the direct ancestor of SARS coronavirus.</title>
<author><name sortKey="Hon, Chung Chau" sort="Hon, Chung Chau" uniqKey="Hon C" first="Chung-Chau" last="Hon">Chung-Chau Hon</name>
<affiliation wicri:level="1"><nlm:affiliation>5N-12, Kadoorie Biological Science Building, The University of Hong Kong, Hong Kong, China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>5N-12, Kadoorie Biological Science Building, The University of Hong Kong, Hong Kong</wicri:regionArea>
</affiliation>
</author>
<author><name sortKey="Lam, Tsan Yuk" sort="Lam, Tsan Yuk" uniqKey="Lam T" first="Tsan-Yuk" last="Lam">Tsan-Yuk Lam</name>
</author>
<author><name sortKey="Shi, Zheng Li" sort="Shi, Zheng Li" uniqKey="Shi Z" first="Zheng-Li" last="Shi">Zheng-Li Shi</name>
</author>
<author><name sortKey="Drummond, Alexei J" sort="Drummond, Alexei J" uniqKey="Drummond A" first="Alexei J" last="Drummond">Alexei J. Drummond</name>
</author>
<author><name sortKey="Yip, Chi Wai" sort="Yip, Chi Wai" uniqKey="Yip C" first="Chi-Wai" last="Yip">Chi-Wai Yip</name>
</author>
<author><name sortKey="Zeng, Fanya" sort="Zeng, Fanya" uniqKey="Zeng F" first="Fanya" last="Zeng">Fanya Zeng</name>
</author>
<author><name sortKey="Lam, Pui Yi" sort="Lam, Pui Yi" uniqKey="Lam P" first="Pui-Yi" last="Lam">Pui-Yi Lam</name>
</author>
<author><name sortKey="Leung, Frederick Chi Ching" sort="Leung, Frederick Chi Ching" uniqKey="Leung F" first="Frederick Chi-Ching" last="Leung">Frederick Chi-Ching Leung</name>
</author>
</analytic>
<series><title level="j">Journal of virology</title>
<idno type="eISSN">1098-5514</idno>
<imprint><date when="2008" type="published">2008</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term>
<term>Base Sequence</term>
<term>Bayes Theorem</term>
<term>Chiroptera (virology)</term>
<term>Genome, Viral (genetics)</term>
<term>Models, Genetic</term>
<term>Molecular Sequence Data</term>
<term>Phylogeny</term>
<term>Recombination, Genetic</term>
<term>SARS Virus (classification)</term>
<term>SARS Virus (genetics)</term>
<term>SARS Virus (isolation & purification)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Animaux</term>
<term>Chiroptera (virologie)</term>
<term>Données de séquences moléculaires</term>
<term>Génome viral (génétique)</term>
<term>Modèles génétiques</term>
<term>Phylogénie</term>
<term>Recombinaison génétique</term>
<term>Séquence nucléotidique</term>
<term>Théorème de Bayes</term>
<term>Virus du SRAS ()</term>
<term>Virus du SRAS (génétique)</term>
<term>Virus du SRAS (isolement et purification)</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>SARS Virus</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Genome, Viral</term>
<term>SARS Virus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Génome viral</term>
<term>Virus du SRAS</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>SARS Virus</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Virus du SRAS</term>
</keywords>
<keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Chiroptera</term>
</keywords>
<keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Chiroptera</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Animals</term>
<term>Base Sequence</term>
<term>Bayes Theorem</term>
<term>Models, Genetic</term>
<term>Molecular Sequence Data</term>
<term>Phylogeny</term>
<term>Recombination, Genetic</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Animaux</term>
<term>Données de séquences moléculaires</term>
<term>Modèles génétiques</term>
<term>Phylogénie</term>
<term>Recombinaison génétique</term>
<term>Séquence nucléotidique</term>
<term>Théorème de Bayes</term>
<term>Virus du SRAS</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Bats have been identified as the natural reservoir of severe acute respiratory syndrome (SARS)-like and SARS coronaviruses (SLCoV and SCoV). However, previous studies suggested that none of the currently sampled bat SLCoVs is the descendant of the direct ancestor of SCoV, based on their relatively distant phylogenetic relationship. In this study, evidence of the recombinant origin of the genome of a bat SLCoV is demonstrated. We identified a potential recombination breakpoint immediately after the consensus intergenic sequence between open reading frame 1 and the S coding region, suggesting the replication intermediates may participate in the recombination event, as previously speculated for other CoVs. Phylogenetic analysis of its parental regions suggests the presence of an uncharacterized SLCoV lineage that is phylogenetically closer to SCoVs than any of the currently sampled bat SLCoVs. Using various Bayesian molecular-clock models, interspecies transfer of this SLCoV lineage from bats to the amplifying host (e.g., civets) was estimated to have happened a median of 4.08 years before the SARS outbreak. Based on this relatively short window period, we speculate that this uncharacterized SLCoV lineage may contain the direct ancestor of SCoV. This study sheds light on the possible host bat species of the direct ancestor of SCoV, providing valuable information on the scope and focus of surveillance for the origin of SCoV.</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">18057240</PMID>
<DateCompleted><Year>2008</Year>
<Month>03</Month>
<Day>05</Day>
</DateCompleted>
<DateRevised><Year>2018</Year>
<Month>11</Month>
<Day>13</Day>
</DateRevised>
<Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1098-5514</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>82</Volume>
<Issue>4</Issue>
<PubDate><Year>2008</Year>
<Month>Feb</Month>
</PubDate>
</JournalIssue>
<Title>Journal of virology</Title>
<ISOAbbreviation>J. Virol.</ISOAbbreviation>
</Journal>
<ArticleTitle>Evidence of the recombinant origin of a bat severe acute respiratory syndrome (SARS)-like coronavirus and its implications on the direct ancestor of SARS coronavirus.</ArticleTitle>
<Pagination><MedlinePgn>1819-26</MedlinePgn>
</Pagination>
<Abstract><AbstractText>Bats have been identified as the natural reservoir of severe acute respiratory syndrome (SARS)-like and SARS coronaviruses (SLCoV and SCoV). However, previous studies suggested that none of the currently sampled bat SLCoVs is the descendant of the direct ancestor of SCoV, based on their relatively distant phylogenetic relationship. In this study, evidence of the recombinant origin of the genome of a bat SLCoV is demonstrated. We identified a potential recombination breakpoint immediately after the consensus intergenic sequence between open reading frame 1 and the S coding region, suggesting the replication intermediates may participate in the recombination event, as previously speculated for other CoVs. Phylogenetic analysis of its parental regions suggests the presence of an uncharacterized SLCoV lineage that is phylogenetically closer to SCoVs than any of the currently sampled bat SLCoVs. Using various Bayesian molecular-clock models, interspecies transfer of this SLCoV lineage from bats to the amplifying host (e.g., civets) was estimated to have happened a median of 4.08 years before the SARS outbreak. Based on this relatively short window period, we speculate that this uncharacterized SLCoV lineage may contain the direct ancestor of SCoV. This study sheds light on the possible host bat species of the direct ancestor of SCoV, providing valuable information on the scope and focus of surveillance for the origin of SCoV.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Hon</LastName>
<ForeName>Chung-Chau</ForeName>
<Initials>CC</Initials>
<AffiliationInfo><Affiliation>5N-12, Kadoorie Biological Science Building, The University of Hong Kong, Hong Kong, China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Lam</LastName>
<ForeName>Tsan-Yuk</ForeName>
<Initials>TY</Initials>
</Author>
<Author ValidYN="Y"><LastName>Shi</LastName>
<ForeName>Zheng-Li</ForeName>
<Initials>ZL</Initials>
</Author>
<Author ValidYN="Y"><LastName>Drummond</LastName>
<ForeName>Alexei J</ForeName>
<Initials>AJ</Initials>
</Author>
<Author ValidYN="Y"><LastName>Yip</LastName>
<ForeName>Chi-Wai</ForeName>
<Initials>CW</Initials>
</Author>
<Author ValidYN="Y"><LastName>Zeng</LastName>
<ForeName>Fanya</ForeName>
<Initials>F</Initials>
</Author>
<Author ValidYN="Y"><LastName>Lam</LastName>
<ForeName>Pui-Yi</ForeName>
<Initials>PY</Initials>
</Author>
<Author ValidYN="Y"><LastName>Leung</LastName>
<ForeName>Frederick Chi-Ching</ForeName>
<Initials>FC</Initials>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2007</Year>
<Month>12</Month>
<Day>05</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>United States</Country>
<MedlineTA>J Virol</MedlineTA>
<NlmUniqueID>0113724</NlmUniqueID>
<ISSNLinking>0022-538X</ISSNLinking>
</MedlineJournalInfo>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D001483" MajorTopicYN="N">Base Sequence</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D001499" MajorTopicYN="N">Bayes Theorem</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D002685" MajorTopicYN="N">Chiroptera</DescriptorName>
<QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016679" MajorTopicYN="N">Genome, Viral</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D008957" MajorTopicYN="Y">Models, Genetic</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D011995" MajorTopicYN="N">Recombination, Genetic</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D045473" MajorTopicYN="N">SARS Virus</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2007</Year>
<Month>12</Month>
<Day>7</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline"><Year>2008</Year>
<Month>3</Month>
<Day>6</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez"><Year>2007</Year>
<Month>12</Month>
<Day>7</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList><ArticleId IdType="pubmed">18057240</ArticleId>
<ArticleId IdType="pii">JVI.01926-07</ArticleId>
<ArticleId IdType="doi">10.1128/JVI.01926-07</ArticleId>
<ArticleId IdType="pmc">PMC2258724</ArticleId>
</ArticleIdList>
<ReferenceList><Reference><Citation>Virology. 1987 Feb;156(2):331-41</Citation>
<ArticleIdList><ArticleId IdType="pubmed">3027982</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Gen Virol. 2006 Nov;87(Pt 11):3355-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17030870</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Vaccine. 1990 Dec;8(6):605-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">1708184</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Gene. 1991 Jul 22;103(2):147-53</Citation>
<ArticleIdList><ArticleId IdType="pubmed">1653754</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Gen Virol. 1999 Oct;80 ( Pt 10):2535-43</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10573145</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2000 Apr;16(4):395-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10869038</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Evol. 2000 Jul;17(7):1081-90</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10889221</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Arch Virol. 2000;145(10):2135-48</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11087096</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Mol Evol. 2002 Feb;54(2):156-65</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11821909</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genetics. 2002 Jul;161(3):1307-20</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12136032</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2003 Apr;77(8):4528-38</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12663759</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nature. 2003 May 15;423(6937):240</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12748632</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2003 May 30;300(5624):1394-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12730500</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2003 Aug 12;19(12):1572-4</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12912839</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2003 Oct 10;302(5643):276-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12958366</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2004 Mar 12;303(5664):1666-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14752165</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Bioinformatics. 2004 May 25;5:65</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15161495</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Evol Biol. 2004 Jun 28;4:21</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15222897</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 1985 Nov;56(2):449-56</Citation>
<ArticleIdList><ArticleId IdType="pubmed">2997467</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 1986 Mar;57(3):729-37</Citation>
<ArticleIdList><ArticleId IdType="pubmed">3005623</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Microbiol Rev. 1992 Mar;56(1):61-79</Citation>
<ArticleIdList><ArticleId IdType="pubmed">1579113</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Vet Microbiol. 1992 Nov;33(1-4):249-62</Citation>
<ArticleIdList><ArticleId IdType="pubmed">1282756</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Arch Virol. 1995;140(2):259-71</Citation>
<ArticleIdList><ArticleId IdType="pubmed">7710354</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 1995 Dec;69(12):7529-40</Citation>
<ArticleIdList><ArticleId IdType="pubmed">7494259</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Adv Exp Med Biol. 1995;380:571-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8830544</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virology. 1996 Sep 1;223(1):89-102</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8806543</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 1997 Mar;71(3):1946-55</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9032326</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Comput Appl Biosci. 1997 Jun;13(3):235-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9183526</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virology. 1997 Jun 23;233(1):43-50</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9201215</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Comput Appl Biosci. 1997 Oct;13(5):555-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9367129</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 1998 May;72(5):4508-14</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9557750</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 1999 Jan;73(1):152-60</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9847317</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 1999 Jan;73(1):638-49</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9847369</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Evol. 1999 Mar;16(3):405-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10331266</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2005 Jan 15;21(2):260-2</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15377507</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Rev Sci Tech. 2004 Aug;23(2):643-60</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15702725</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Adv Exp Med Biol. 2006;581:301-4</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17037548</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2006 Dec 15;22(24):3096-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17110367</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Emerg Infect Dis. 2006 Dec;12(12):1834-40</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17326933</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2007 Apr;81(8):4012-20</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17267506</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2005 Feb 15;102(7):2430-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15695582</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2005 May;79(9):5288-95</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15827143</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Evol. 2005 May;22(5):1355-63</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15758207</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2005 Sep;79(18):11892-900</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16140765</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2005 Sep 9;309(5741):1680-1</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16150997</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2005 Sep 27;102(39):14040-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16169905</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2005 Oct 28;310(5748):676-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16195424</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2006 May;80(9):4211-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16611880</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Biol. 2006 May;4(5):e88</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16683862</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2006 Aug;80(15):7481-90</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16840328</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2006 Sep;80(17):8503-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16912300</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 1988 Jun;62(6):1989-98</Citation>
<ArticleIdList><ArticleId IdType="pubmed">2835504</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/PubMed/Curation
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001C60 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/PubMed/Curation/biblio.hfd -nk 001C60 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Sante |area= SrasV1 |flux= PubMed |étape= Curation |type= RBID |clé= pubmed:18057240 |texte= Evidence of the recombinant origin of a bat severe acute respiratory syndrome (SARS)-like coronavirus and its implications on the direct ancestor of SARS coronavirus. }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Curation/RBID.i -Sk "pubmed:18057240" \ | HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Curation/biblio.hfd \ | NlmPubMed2Wicri -a SrasV1
![]() | This area was generated with Dilib version V0.6.33. | ![]() |