Serveur d'exploration SRAS

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Detecting human-to-human transmission of avian influenza A (H5N1).

Identifieur interne : 001C19 ( PubMed/Curation ); précédent : 001C18; suivant : 001C20

Detecting human-to-human transmission of avian influenza A (H5N1).

Auteurs : Yang Yang [États-Unis] ; M Elizabeth Halloran ; Jonathan D. Sugimoto ; Ira M. Longini

Source :

RBID : pubmed:18252106

Descripteurs français

English descriptors

Abstract

Highly pathogenic avian influenza A (HPAI) subtype H5N1 has caused family case clusters, mostly in Southeast Asia, that could be due to human-to-human transmission. Should this virus, or another zoonotic influenza virus, gain the ability of sustained human-to-human transmission, an influenza pandemic could result. We used statistical methods to test whether observed clusters of HPAI (H5N1) illnesses in families in northern Sumatra, Indonesia, and eastern Turkey were due to human-to-human transmission. Given that human-to-human transmission occurs, we estimate the infection secondary attack rates (SARs) and the local basic reproductive number, R0. We find statistical evidence of human-to-human transmission (p = 0.009) in Sumatra but not in Turkey (p = 0.114). For Sumatra, the estimated household SAR was 29% (95% confidence interval [CI] 15%-51%). The estimated lower limit on the local R0 was 1.14 (95% CI 0.61-2.14). Effective HPAI (H5N1) surveillance, containment response, and field evaluation are essential to monitor and contain potential pandemic strains.

DOI: 10.3201/eid1309.070111
PubMed: 18252106

Links toward previous steps (curation, corpus...)


Links to Exploration step

pubmed:18252106

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Detecting human-to-human transmission of avian influenza A (H5N1).</title>
<author>
<name sortKey="Yang, Yang" sort="Yang, Yang" uniqKey="Yang Y" first="Yang" last="Yang">Yang Yang</name>
<affiliation wicri:level="1">
<nlm:affiliation>Fred Hutchinson Cancer Research Center, Seattle, Washington 98109-1024, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Fred Hutchinson Cancer Research Center, Seattle, Washington 98109-1024</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Halloran, M Elizabeth" sort="Halloran, M Elizabeth" uniqKey="Halloran M" first="M Elizabeth" last="Halloran">M Elizabeth Halloran</name>
</author>
<author>
<name sortKey="Sugimoto, Jonathan D" sort="Sugimoto, Jonathan D" uniqKey="Sugimoto J" first="Jonathan D" last="Sugimoto">Jonathan D. Sugimoto</name>
</author>
<author>
<name sortKey="Longini, Ira M" sort="Longini, Ira M" uniqKey="Longini I" first="Ira M" last="Longini">Ira M. Longini</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2007">2007</date>
<idno type="RBID">pubmed:18252106</idno>
<idno type="pmid">18252106</idno>
<idno type="doi">10.3201/eid1309.070111</idno>
<idno type="wicri:Area/PubMed/Corpus">001C19</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001C19</idno>
<idno type="wicri:Area/PubMed/Curation">001C19</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001C19</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Detecting human-to-human transmission of avian influenza A (H5N1).</title>
<author>
<name sortKey="Yang, Yang" sort="Yang, Yang" uniqKey="Yang Y" first="Yang" last="Yang">Yang Yang</name>
<affiliation wicri:level="1">
<nlm:affiliation>Fred Hutchinson Cancer Research Center, Seattle, Washington 98109-1024, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Fred Hutchinson Cancer Research Center, Seattle, Washington 98109-1024</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Halloran, M Elizabeth" sort="Halloran, M Elizabeth" uniqKey="Halloran M" first="M Elizabeth" last="Halloran">M Elizabeth Halloran</name>
</author>
<author>
<name sortKey="Sugimoto, Jonathan D" sort="Sugimoto, Jonathan D" uniqKey="Sugimoto J" first="Jonathan D" last="Sugimoto">Jonathan D. Sugimoto</name>
</author>
<author>
<name sortKey="Longini, Ira M" sort="Longini, Ira M" uniqKey="Longini I" first="Ira M" last="Longini">Ira M. Longini</name>
</author>
</analytic>
<series>
<title level="j">Emerging infectious diseases</title>
<idno type="ISSN">1080-6040</idno>
<imprint>
<date when="2007" type="published">2007</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Disease Outbreaks</term>
<term>Family</term>
<term>Humans</term>
<term>Indonesia (epidemiology)</term>
<term>Influenza A Virus, H5N1 Subtype (isolation & purification)</term>
<term>Influenza, Human (transmission)</term>
<term>Influenza, Human (virology)</term>
<term>Turkey (epidemiology)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Famille</term>
<term>Flambées de maladies</term>
<term>Grippe humaine (transmission)</term>
<term>Grippe humaine (virologie)</term>
<term>Humains</term>
<term>Indonésie (épidémiologie)</term>
<term>Sous-type H5N1 du virus de la grippe A (isolement et purification)</term>
<term>Turquie (épidémiologie)</term>
</keywords>
<keywords scheme="MESH" type="geographic" qualifier="epidemiology" xml:lang="en">
<term>Indonesia</term>
<term>Turkey</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en">
<term>Influenza A Virus, H5N1 Subtype</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr">
<term>Sous-type H5N1 du virus de la grippe A</term>
</keywords>
<keywords scheme="MESH" qualifier="transmission" xml:lang="en">
<term>Influenza, Human</term>
</keywords>
<keywords scheme="MESH" qualifier="virologie" xml:lang="fr">
<term>Grippe humaine</term>
</keywords>
<keywords scheme="MESH" qualifier="virology" xml:lang="en">
<term>Influenza, Human</term>
</keywords>
<keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr">
<term>Grippe humaine</term>
<term>Indonésie</term>
<term>Turquie</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Disease Outbreaks</term>
<term>Family</term>
<term>Humans</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Famille</term>
<term>Flambées de maladies</term>
<term>Humains</term>
</keywords>
<keywords scheme="Wicri" type="geographic" xml:lang="fr">
<term>Indonésie</term>
<term>Turquie</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Highly pathogenic avian influenza A (HPAI) subtype H5N1 has caused family case clusters, mostly in Southeast Asia, that could be due to human-to-human transmission. Should this virus, or another zoonotic influenza virus, gain the ability of sustained human-to-human transmission, an influenza pandemic could result. We used statistical methods to test whether observed clusters of HPAI (H5N1) illnesses in families in northern Sumatra, Indonesia, and eastern Turkey were due to human-to-human transmission. Given that human-to-human transmission occurs, we estimate the infection secondary attack rates (SARs) and the local basic reproductive number, R0. We find statistical evidence of human-to-human transmission (p = 0.009) in Sumatra but not in Turkey (p = 0.114). For Sumatra, the estimated household SAR was 29% (95% confidence interval [CI] 15%-51%). The estimated lower limit on the local R0 was 1.14 (95% CI 0.61-2.14). Effective HPAI (H5N1) surveillance, containment response, and field evaluation are essential to monitor and contain potential pandemic strains.</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="MEDLINE" Owner="NLM">
<PMID Version="1">18252106</PMID>
<DateCompleted>
<Year>2008</Year>
<Month>02</Month>
<Day>27</Day>
</DateCompleted>
<DateRevised>
<Year>2018</Year>
<Month>11</Month>
<Day>13</Day>
</DateRevised>
<Article PubModel="Print">
<Journal>
<ISSN IssnType="Print">1080-6040</ISSN>
<JournalIssue CitedMedium="Print">
<Volume>13</Volume>
<Issue>9</Issue>
<PubDate>
<Year>2007</Year>
<Month>Sep</Month>
</PubDate>
</JournalIssue>
<Title>Emerging infectious diseases</Title>
<ISOAbbreviation>Emerging Infect. Dis.</ISOAbbreviation>
</Journal>
<ArticleTitle>Detecting human-to-human transmission of avian influenza A (H5N1).</ArticleTitle>
<Pagination>
<MedlinePgn>1348-53</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.3201/eid1309.070111</ELocationID>
<Abstract>
<AbstractText>Highly pathogenic avian influenza A (HPAI) subtype H5N1 has caused family case clusters, mostly in Southeast Asia, that could be due to human-to-human transmission. Should this virus, or another zoonotic influenza virus, gain the ability of sustained human-to-human transmission, an influenza pandemic could result. We used statistical methods to test whether observed clusters of HPAI (H5N1) illnesses in families in northern Sumatra, Indonesia, and eastern Turkey were due to human-to-human transmission. Given that human-to-human transmission occurs, we estimate the infection secondary attack rates (SARs) and the local basic reproductive number, R0. We find statistical evidence of human-to-human transmission (p = 0.009) in Sumatra but not in Turkey (p = 0.114). For Sumatra, the estimated household SAR was 29% (95% confidence interval [CI] 15%-51%). The estimated lower limit on the local R0 was 1.14 (95% CI 0.61-2.14). Effective HPAI (H5N1) surveillance, containment response, and field evaluation are essential to monitor and contain potential pandemic strains.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Yang</LastName>
<ForeName>Yang</ForeName>
<Initials>Y</Initials>
<AffiliationInfo>
<Affiliation>Fred Hutchinson Cancer Research Center, Seattle, Washington 98109-1024, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Halloran</LastName>
<ForeName>M Elizabeth</ForeName>
<Initials>ME</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Sugimoto</LastName>
<ForeName>Jonathan D</ForeName>
<Initials>JD</Initials>
</Author>
<Author ValidYN="Y">
<LastName>Longini</LastName>
<ForeName>Ira M</ForeName>
<Initials>IM</Initials>
<Suffix>Jr</Suffix>
</Author>
</AuthorList>
<Language>eng</Language>
<GrantList CompleteYN="Y">
<Grant>
<GrantID>R01 AI032042</GrantID>
<Acronym>AI</Acronym>
<Agency>NIAID NIH HHS</Agency>
<Country>United States</Country>
</Grant>
<Grant>
<GrantID>U01 GM070749</GrantID>
<Acronym>GM</Acronym>
<Agency>NIGMS NIH HHS</Agency>
<Country>United States</Country>
</Grant>
<Grant>
<GrantID>R01-AI32042</GrantID>
<Acronym>AI</Acronym>
<Agency>NIAID NIH HHS</Agency>
<Country>United States</Country>
</Grant>
<Grant>
<GrantID>U01-GM070749</GrantID>
<Acronym>GM</Acronym>
<Agency>NIGMS NIH HHS</Agency>
<Country>United States</Country>
</Grant>
</GrantList>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D052061">Research Support, N.I.H., Extramural</PublicationType>
</PublicationTypeList>
</Article>
<MedlineJournalInfo>
<Country>United States</Country>
<MedlineTA>Emerg Infect Dis</MedlineTA>
<NlmUniqueID>9508155</NlmUniqueID>
<ISSNLinking>1080-6040</ISSNLinking>
</MedlineJournalInfo>
<CitationSubset>IM</CitationSubset>
<CommentsCorrectionsList>
<CommentsCorrections RefType="CommentIn">
<RefSource>Emerg Infect Dis. 2007 Dec;13(12):1969-71; author reply 1970-1</RefSource>
<PMID Version="1">18258068</PMID>
</CommentsCorrections>
</CommentsCorrectionsList>
<MeshHeadingList>
<MeshHeading>
<DescriptorName UI="D004196" MajorTopicYN="N">Disease Outbreaks</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D005190" MajorTopicYN="N">Family</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D006801" MajorTopicYN="N">Humans</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D007214" MajorTopicYN="N" Type="Geographic">Indonesia</DescriptorName>
<QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D053124" MajorTopicYN="N">Influenza A Virus, H5N1 Subtype</DescriptorName>
<QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D007251" MajorTopicYN="N">Influenza, Human</DescriptorName>
<QualifierName UI="Q000635" MajorTopicYN="Y">transmission</QualifierName>
<QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D014421" MajorTopicYN="N" Type="Geographic">Turkey</DescriptorName>
<QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="pubmed">
<Year>2008</Year>
<Month>2</Month>
<Day>7</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2008</Year>
<Month>2</Month>
<Day>28</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez">
<Year>2008</Year>
<Month>2</Month>
<Day>7</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">18252106</ArticleId>
<ArticleId IdType="pmc">PMC2857285</ArticleId>
<ArticleId IdType="doi">10.3201/eid1309.070111</ArticleId>
</ArticleIdList>
<ReferenceList>
<Reference>
<Citation>Biometrics. 1992 Mar;48(1):117-28</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">1316178</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Am J Epidemiol. 1982 May;115(5):736-51</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">7081204</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>J R Stat Soc Ser C Appl Stat. 2006 May;55(3):317-330</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">22457545</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Am J Epidemiol. 1988 Oct;128(4):845-59</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">3421247</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Ann Appl Stat. 2007 Jun 1;1(1):211-228</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">19436773</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Science. 2005 Aug 12;309(5737):1083-7</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16079251</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>N Engl J Med. 2005 Jan 27;352(4):405-7</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">15668221</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Nature. 2005 Sep 8;437(7056):209-14</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16079797</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Science. 2003 Nov 28;302(5650):1519-22</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">14645836</ArticleId>
</ArticleIdList>
</Reference>
<Reference>
<Citation>Nature. 2006 Jul 13;442(7099):114-5</Citation>
<ArticleIdList>
<ArticleId IdType="pubmed">16837983</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/PubMed/Curation
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001C19 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/PubMed/Curation/biblio.hfd -nk 001C19 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    SrasV1
   |flux=    PubMed
   |étape=   Curation
   |type=    RBID
   |clé=     pubmed:18252106
   |texte=   Detecting human-to-human transmission of avian influenza A (H5N1).
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Curation/RBID.i   -Sk "pubmed:18252106" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Curation/biblio.hfd   \
       | NlmPubMed2Wicri -a SrasV1 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Tue Apr 28 14:49:16 2020. Site generation: Sat Mar 27 22:06:49 2021