ORF8-Related Genetic Evidence for Chinese Horseshoe Bats as the Source of Human Severe Acute Respiratory Syndrome Coronavirus.
Identifieur interne : 000D56 ( PubMed/Curation ); précédent : 000D55; suivant : 000D57ORF8-Related Genetic Evidence for Chinese Horseshoe Bats as the Source of Human Severe Acute Respiratory Syndrome Coronavirus.
Auteurs : Zhiqiang Wu [République populaire de Chine] ; Li Yang [République populaire de Chine] ; Xianwen Ren [République populaire de Chine] ; Junpeng Zhang ; Fan Yang [République populaire de Chine] ; Shuyi Zhang [République populaire de Chine] ; Qi Jin [République populaire de Chine]Source :
- The Journal of infectious diseases [ 1537-6613 ] ; 2016.
Descripteurs français
- KwdFr :
- ARN viral (génétique), Analyse de regroupements, Analyse de séquence d'ADN, Animaux, Chine, Chiroptera (virologie), Données de séquences moléculaires, Génotype, Humains, Protéines de la matrice virale (génétique), Similitude de séquences, Virus du SRAS (), Virus du SRAS (génétique), Évolution moléculaire.
- MESH :
- Wicri :
- geographic : République populaire de Chine.
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : RNA, Viral, Viral Matrix Proteins.
- geographic : China.
- classification : SARS Virus.
- genetics : SARS Virus.
- virology : Chiroptera.
- Animals, Cluster Analysis, Evolution, Molecular, Genotype, Humans, Molecular Sequence Data, Sequence Analysis, DNA, Sequence Homology.
Abstract
Several lineage B betacoronaviruses termed severe acute respiratory syndrome (SARS)-like CoVs (SL-CoVs) were identified from Rhinolophus bats in China. These viruses are characterized by a set of unique accessory open reading frames (ORFs) that are located between the M and N genes. Among unique accessory ORFs, ORF8 is most hypervariable. In this study, the ORF8s of all SL-CoVs were classified into 3 types, and, for the first time, it was found that very few SL-CoVs from Rhinolophus sinicus have ORF8s that are identical to that of human SARS-CoV. This finding provides new genetic evidence for Chinese horseshoe bats as the source of human SARS-CoV.
DOI: 10.1093/infdis/jiv476
PubMed: 26433221
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Junpeng Zhang<affiliation><nlm:affiliation>State Key Laboratory of Estuarine and Coastal Research, Institute of Estuarine and Coastal Research, East China Normal University, Shanghai.</nlm:affiliation>
<wicri:noCountry code="subField">Shanghai</wicri:noCountry>
</affiliation>
Le document en format XML
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<front><div type="abstract" xml:lang="en">Several lineage B betacoronaviruses termed severe acute respiratory syndrome (SARS)-like CoVs (SL-CoVs) were identified from Rhinolophus bats in China. These viruses are characterized by a set of unique accessory open reading frames (ORFs) that are located between the M and N genes. Among unique accessory ORFs, ORF8 is most hypervariable. In this study, the ORF8s of all SL-CoVs were classified into 3 types, and, for the first time, it was found that very few SL-CoVs from Rhinolophus sinicus have ORF8s that are identical to that of human SARS-CoV. This finding provides new genetic evidence for Chinese horseshoe bats as the source of human SARS-CoV. </div>
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<Abstract><AbstractText>Several lineage B betacoronaviruses termed severe acute respiratory syndrome (SARS)-like CoVs (SL-CoVs) were identified from Rhinolophus bats in China. These viruses are characterized by a set of unique accessory open reading frames (ORFs) that are located between the M and N genes. Among unique accessory ORFs, ORF8 is most hypervariable. In this study, the ORF8s of all SL-CoVs were classified into 3 types, and, for the first time, it was found that very few SL-CoVs from Rhinolophus sinicus have ORF8s that are identical to that of human SARS-CoV. This finding provides new genetic evidence for Chinese horseshoe bats as the source of human SARS-CoV. </AbstractText>
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