Prevalence and phylogeny of coronaviruses in wild birds from the Bering Strait area (Beringia).
Identifieur interne : 001594 ( PubMed/Corpus ); précédent : 001593; suivant : 001595Prevalence and phylogeny of coronaviruses in wild birds from the Bering Strait area (Beringia).
Auteurs : Shaman Muradrasoli ; Adám Bálint ; John Wahlgren ; Jonas Waldenström ; Sándor Belák ; Jonas Blomberg ; Björn OlsenSource :
- PloS one [ 1932-6203 ] ; 2010.
English descriptors
- KwdEn :
- MESH :
- classification : Coronavirus.
- epidemiology : Bird Diseases.
- isolation & purification : Coronavirus.
- virology : Bird Diseases, Birds.
- Animals, Animals, Wild, Molecular Sequence Data, Phylogeny, Reverse Transcriptase Polymerase Chain Reaction, Species Specificity.
Abstract
Coronaviruses (CoVs) can cause mild to severe disease in humans and animals, their host range and environmental spread seem to have been largely underestimated, and they are currently being investigated for their potential medical relevance. Infectious bronchitis virus (IBV) belongs to gamma-coronaviruses and causes a costly respiratory viral disease in chickens. The role of wild birds in the epidemiology of IBV is poorly understood. In the present study, we examined 1,002 cloacal and faecal samples collected from 26 wild bird species in the Beringia area for the presence of CoVs, and then we performed statistical and phylogenetic analyses. We detected diverse CoVs by RT-PCR in wild birds in the Beringia area. Sequence analysis showed that the detected viruses are gamma-coronaviruses related to IBV. These findings suggest that wild birds are able to carry gamma-coronaviruses asymptomatically. We concluded that CoVs are widespread among wild birds in Beringia, and their geographic spread and frequency is higher than previously realised. Thus, Avian CoV can be efficiently disseminated over large distances and could be a genetic reservoir for future emerging pathogenic CoVs. Considering the great animal health and economic impact of IBV as well as the recent emergence of novel coronaviruses such as SARS-coronavirus, it is important to investigate the role of wildlife reservoirs in CoV infection biology and epidemiology.
DOI: 10.1371/journal.pone.0013640
PubMed: 21060827
Links to Exploration step
pubmed:21060827Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Prevalence and phylogeny of coronaviruses in wild birds from the Bering Strait area (Beringia).</title><author><name sortKey="Muradrasoli, Shaman" sort="Muradrasoli, Shaman" uniqKey="Muradrasoli S" first="Shaman" last="Muradrasoli">Shaman Muradrasoli</name><affiliation><nlm:affiliation>Section of Clinical Virology, Department of Medical Sciences, Uppsala University, Uppsala, Sweden. shaman.muradrasoli@bvf.slu.se</nlm:affiliation></affiliation></author><author><name sortKey="Balint, Adam" sort="Balint, Adam" uniqKey="Balint A" first="Adám" last="Bálint">Adám Bálint</name></author><author><name sortKey="Wahlgren, John" sort="Wahlgren, John" uniqKey="Wahlgren J" first="John" last="Wahlgren">John Wahlgren</name></author><author><name sortKey="Waldenstrom, Jonas" sort="Waldenstrom, Jonas" uniqKey="Waldenstrom J" first="Jonas" last="Waldenström">Jonas Waldenström</name></author><author><name sortKey="Belak, Sandor" sort="Belak, Sandor" uniqKey="Belak S" first="Sándor" last="Belák">Sándor Belák</name></author><author><name sortKey="Blomberg, Jonas" sort="Blomberg, Jonas" uniqKey="Blomberg J" first="Jonas" last="Blomberg">Jonas Blomberg</name></author><author><name sortKey="Olsen, Bjorn" sort="Olsen, Bjorn" uniqKey="Olsen B" first="Björn" last="Olsen">Björn Olsen</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2010">2010</date><idno type="RBID">pubmed:21060827</idno><idno type="pmid">21060827</idno><idno type="doi">10.1371/journal.pone.0013640</idno><idno type="wicri:Area/PubMed/Corpus">001594</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001594</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Prevalence and phylogeny of coronaviruses in wild birds from the Bering Strait area (Beringia).</title><author><name sortKey="Muradrasoli, Shaman" sort="Muradrasoli, Shaman" uniqKey="Muradrasoli S" first="Shaman" last="Muradrasoli">Shaman Muradrasoli</name><affiliation><nlm:affiliation>Section of Clinical Virology, Department of Medical Sciences, Uppsala University, Uppsala, Sweden. shaman.muradrasoli@bvf.slu.se</nlm:affiliation></affiliation></author><author><name sortKey="Balint, Adam" sort="Balint, Adam" uniqKey="Balint A" first="Adám" last="Bálint">Adám Bálint</name></author><author><name sortKey="Wahlgren, John" sort="Wahlgren, John" uniqKey="Wahlgren J" first="John" last="Wahlgren">John Wahlgren</name></author><author><name sortKey="Waldenstrom, Jonas" sort="Waldenstrom, Jonas" uniqKey="Waldenstrom J" first="Jonas" last="Waldenström">Jonas Waldenström</name></author><author><name sortKey="Belak, Sandor" sort="Belak, Sandor" uniqKey="Belak S" first="Sándor" last="Belák">Sándor Belák</name></author><author><name sortKey="Blomberg, Jonas" sort="Blomberg, Jonas" uniqKey="Blomberg J" first="Jonas" last="Blomberg">Jonas Blomberg</name></author><author><name sortKey="Olsen, Bjorn" sort="Olsen, Bjorn" uniqKey="Olsen B" first="Björn" last="Olsen">Björn Olsen</name></author></analytic><series><title level="j">PloS one</title><idno type="eISSN">1932-6203</idno><imprint><date when="2010" type="published">2010</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>Animals, Wild</term><term>Bird Diseases (epidemiology)</term><term>Bird Diseases (virology)</term><term>Birds (virology)</term><term>Coronavirus (classification)</term><term>Coronavirus (isolation & purification)</term><term>Molecular Sequence Data</term><term>Phylogeny</term><term>Reverse Transcriptase Polymerase Chain Reaction</term><term>Species Specificity</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Bird Diseases</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Bird Diseases</term><term>Birds</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Animals, Wild</term><term>Molecular Sequence Data</term><term>Phylogeny</term><term>Reverse Transcriptase Polymerase Chain Reaction</term><term>Species Specificity</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Coronaviruses (CoVs) can cause mild to severe disease in humans and animals, their host range and environmental spread seem to have been largely underestimated, and they are currently being investigated for their potential medical relevance. Infectious bronchitis virus (IBV) belongs to gamma-coronaviruses and causes a costly respiratory viral disease in chickens. The role of wild birds in the epidemiology of IBV is poorly understood. In the present study, we examined 1,002 cloacal and faecal samples collected from 26 wild bird species in the Beringia area for the presence of CoVs, and then we performed statistical and phylogenetic analyses. We detected diverse CoVs by RT-PCR in wild birds in the Beringia area. Sequence analysis showed that the detected viruses are gamma-coronaviruses related to IBV. These findings suggest that wild birds are able to carry gamma-coronaviruses asymptomatically. We concluded that CoVs are widespread among wild birds in Beringia, and their geographic spread and frequency is higher than previously realised. Thus, Avian CoV can be efficiently disseminated over large distances and could be a genetic reservoir for future emerging pathogenic CoVs. Considering the great animal health and economic impact of IBV as well as the recent emergence of novel coronaviruses such as SARS-coronavirus, it is important to investigate the role of wildlife reservoirs in CoV infection biology and epidemiology.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">21060827</PMID><DateCompleted><Year>2011</Year><Month>03</Month><Day>07</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1932-6203</ISSN><JournalIssue CitedMedium="Internet"><Volume>5</Volume><Issue>10</Issue><PubDate><Year>2010</Year><Month>Oct</Month><Day>29</Day></PubDate></JournalIssue><Title>PloS one</Title><ISOAbbreviation>PLoS ONE</ISOAbbreviation></Journal><ArticleTitle>Prevalence and phylogeny of coronaviruses in wild birds from the Bering Strait area (Beringia).</ArticleTitle><Pagination><MedlinePgn>e13640</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0013640</ELocationID><Abstract><AbstractText>Coronaviruses (CoVs) can cause mild to severe disease in humans and animals, their host range and environmental spread seem to have been largely underestimated, and they are currently being investigated for their potential medical relevance. Infectious bronchitis virus (IBV) belongs to gamma-coronaviruses and causes a costly respiratory viral disease in chickens. The role of wild birds in the epidemiology of IBV is poorly understood. In the present study, we examined 1,002 cloacal and faecal samples collected from 26 wild bird species in the Beringia area for the presence of CoVs, and then we performed statistical and phylogenetic analyses. We detected diverse CoVs by RT-PCR in wild birds in the Beringia area. Sequence analysis showed that the detected viruses are gamma-coronaviruses related to IBV. These findings suggest that wild birds are able to carry gamma-coronaviruses asymptomatically. We concluded that CoVs are widespread among wild birds in Beringia, and their geographic spread and frequency is higher than previously realised. Thus, Avian CoV can be efficiently disseminated over large distances and could be a genetic reservoir for future emerging pathogenic CoVs. Considering the great animal health and economic impact of IBV as well as the recent emergence of novel coronaviruses such as SARS-coronavirus, it is important to investigate the role of wildlife reservoirs in CoV infection biology and epidemiology.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Muradrasoli</LastName><ForeName>Shaman</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Section of Clinical Virology, Department of Medical Sciences, Uppsala University, Uppsala, Sweden. shaman.muradrasoli@bvf.slu.se</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bálint</LastName><ForeName>Adám</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Wahlgren</LastName><ForeName>John</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Waldenström</LastName><ForeName>Jonas</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Belák</LastName><ForeName>Sándor</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Blomberg</LastName><ForeName>Jonas</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Olsen</LastName><ForeName>Björn</ForeName><Initials>B</Initials></Author></AuthorList><Language>eng</Language><DataBankList CompleteYN="Y"><DataBank><DataBankName>GENBANK</DataBankName><AccessionNumberList><AccessionNumber>GU396668</AccessionNumber><AccessionNumber>GU396669</AccessionNumber><AccessionNumber>GU396670</AccessionNumber><AccessionNumber>GU396671</AccessionNumber><AccessionNumber>GU396672</AccessionNumber><AccessionNumber>GU396673</AccessionNumber><AccessionNumber>GU396674</AccessionNumber><AccessionNumber>GU396675</AccessionNumber><AccessionNumber>GU396676</AccessionNumber><AccessionNumber>GU396677</AccessionNumber><AccessionNumber>GU396678</AccessionNumber><AccessionNumber>GU396679</AccessionNumber><AccessionNumber>GU396680</AccessionNumber><AccessionNumber>GU396681</AccessionNumber><AccessionNumber>GU396682</AccessionNumber><AccessionNumber>GU396683</AccessionNumber><AccessionNumber>GU396684</AccessionNumber><AccessionNumber>GU396685</AccessionNumber><AccessionNumber>GU396686</AccessionNumber><AccessionNumber>GU396687</AccessionNumber><AccessionNumber>GU396688</AccessionNumber><AccessionNumber>GU396689</AccessionNumber><AccessionNumber>GU396690</AccessionNumber></AccessionNumberList></DataBank></DataBankList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2010</Year><Month>10</Month><Day>29</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>PLoS One</MedlineTA><NlmUniqueID>101285081</NlmUniqueID><ISSNLinking>1932-6203</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D000835" MajorTopicYN="Y">Animals, Wild</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D001715" MajorTopicYN="N">Bird Diseases</DescriptorName><QualifierName UI="Q000453" MajorTopicYN="N">epidemiology</QualifierName><QualifierName UI="Q000821" MajorTopicYN="N">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D001717" MajorTopicYN="N">Birds</DescriptorName><QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017934" MajorTopicYN="N">Coronavirus</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="Y">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020133" MajorTopicYN="N">Reverse Transcriptase Polymerase Chain Reaction</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013045" MajorTopicYN="N">Species Specificity</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2010</Year><Month>04</Month><Day>20</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2010</Year><Month>10</Month><Day>03</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2010</Year><Month>11</Month><Day>10</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2010</Year><Month>11</Month><Day>10</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2011</Year><Month>3</Month><Day>8</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">21060827</ArticleId><ArticleId IdType="doi">10.1371/journal.pone.0013640</ArticleId><ArticleId IdType="pmc">PMC2966397</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Arch Virol. 2003 Nov;148(11):2207-35</Citation><ArticleIdList><ArticleId IdType="pubmed">14579179</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 2005 Dec 1;438(7068):575-6</Citation><ArticleIdList><ArticleId IdType="pubmed">16319873</ArticleId></ArticleIdList></Reference><Reference><Citation>Arch Virol. 1997;142(3):629-33</Citation><ArticleIdList><ArticleId IdType="pubmed">9349308</ArticleId></ArticleIdList></Reference><Reference><Citation>J Feline Med Surg. 2009 Apr;11(4):225-58</Citation><ArticleIdList><ArticleId IdType="pubmed">19254859</ArticleId></ArticleIdList></Reference><Reference><Citation>J Virol. 2006 Jul;80(14):7136-45</Citation><ArticleIdList><ArticleId IdType="pubmed">16809319</ArticleId></ArticleIdList></Reference><Reference><Citation>Avian Pathol. 2005 Feb;34(1):20-5</Citation><ArticleIdList><ArticleId IdType="pubmed">15763735</ArticleId></ArticleIdList></Reference><Reference><Citation>Avian Pathol. 2001 Aug;30(4):355-68</Citation><ArticleIdList><ArticleId IdType="pubmed">19184921</ArticleId></ArticleIdList></Reference><Reference><Citation>Emerg Infect Dis. 2009 Jul;15(7):1091-4</Citation><ArticleIdList><ArticleId IdType="pubmed">19624927</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Rev. 2006 Sep;30(5):760-73</Citation><ArticleIdList><ArticleId IdType="pubmed">16911043</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Top Microbiol Immunol. 1992;176:75-97</Citation><ArticleIdList><ArticleId IdType="pubmed">1600756</ArticleId></ArticleIdList></Reference><Reference><Citation>J Virol. 2005 Jan;79(2):884-95</Citation><ArticleIdList><ArticleId IdType="pubmed">15613317</ArticleId></ArticleIdList></Reference><Reference><Citation>Arch Virol. 2007 Jan;152(1):41-58</Citation><ArticleIdList><ArticleId IdType="pubmed">16941059</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2006 Jul 28;313(5786):523-6</Citation><ArticleIdList><ArticleId IdType="pubmed">16728595</ArticleId></ArticleIdList></Reference><Reference><Citation>Virus Res. 2008 Sep;136(1-2):43-9</Citation><ArticleIdList><ArticleId IdType="pubmed">18514348</ArticleId></ArticleIdList></Reference><Reference><Citation>Vet Res. 2007 Mar-Apr;38(2):281-97</Citation><ArticleIdList><ArticleId IdType="pubmed">17296157</ArticleId></ArticleIdList></Reference><Reference><Citation>J Gen Virol. 2005 Mar;86(Pt 3):719-25</Citation><ArticleIdList><ArticleId IdType="pubmed">15722532</ArticleId></ArticleIdList></Reference><Reference><Citation>J Virol Methods. 2009 Aug;159(2):277-87</Citation><ArticleIdList><ArticleId IdType="pubmed">19406168</ArticleId></ArticleIdList></Reference><Reference><Citation>Virus Res. 2007 Dec;130(1-2):121-8</Citation><ArticleIdList><ArticleId IdType="pubmed">17629993</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2000 May 26;288(5470):1432-5</Citation><ArticleIdList><ArticleId IdType="pubmed">10827955</ArticleId></ArticleIdList></Reference><Reference><Citation>Avian Pathol. 2002 Feb;31(1):81-93</Citation><ArticleIdList><ArticleId IdType="pubmed">12425795</ArticleId></ArticleIdList></Reference><Reference><Citation>Avian Pathol. 2000 Jun;29(3):207-12</Citation><ArticleIdList><ArticleId IdType="pubmed">19184806</ArticleId></ArticleIdList></Reference><Reference><Citation>J Virol. 2009 Jan;83(2):908-17</Citation><ArticleIdList><ArticleId IdType="pubmed">18971277</ArticleId></ArticleIdList></Reference><Reference><Citation>J Gen Virol. 2005 Jun;86(Pt 6):1597-607</Citation><ArticleIdList><ArticleId IdType="pubmed">15914837</ArticleId></ArticleIdList></Reference><Reference><Citation>J Virol. 2007 Jul;81(13):6920-6</Citation><ArticleIdList><ArticleId IdType="pubmed">17459938</ArticleId></ArticleIdList></Reference><Reference><Citation>Vector Borne Zoonotic Dis. 2008 Dec;8(6):783-90</Citation><ArticleIdList><ArticleId IdType="pubmed">18637721</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 1998 Jan 16;279(5349):393-6</Citation><ArticleIdList><ArticleId IdType="pubmed">9430591</ArticleId></ArticleIdList></Reference><Reference><Citation>J Virol. 2006 Jul;80(14):7270-4</Citation><ArticleIdList><ArticleId IdType="pubmed">16809333</ArticleId></ArticleIdList></Reference><Reference><Citation>Rev Sci Tech. 2004 Aug;23(2):643-60</Citation><ArticleIdList><ArticleId IdType="pubmed">15702725</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2007 Aug;24(8):1596-9</Citation><ArticleIdList><ArticleId IdType="pubmed">17488738</ArticleId></ArticleIdList></Reference><Reference><Citation>J Virol. 2008 May;82(10):5084-8</Citation><ArticleIdList><ArticleId IdType="pubmed">18353961</ArticleId></ArticleIdList></Reference><Reference><Citation>Avian Pathol. 2005 Dec;34(6):439-48</Citation><ArticleIdList><ArticleId IdType="pubmed">16537157</ArticleId></ArticleIdList></Reference><Reference><Citation>J Virol. 2004 Jan;78(1):76-82</Citation><ArticleIdList><ArticleId IdType="pubmed">14671089</ArticleId></ArticleIdList></Reference><Reference><Citation>Virus Res. 2008 Aug;135(2):237-46</Citation><ArticleIdList><ArticleId IdType="pubmed">18468711</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/PubMed/Corpus
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001594 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd -nk 001594 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Sante
|area= SrasV1
|flux= PubMed
|étape= Corpus
|type= RBID
|clé= pubmed:21060827
|texte= Prevalence and phylogeny of coronaviruses in wild birds from the Bering Strait area (Beringia).
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Corpus/RBID.i -Sk "pubmed:21060827" \
| HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Corpus/biblio.hfd \
| NlmPubMed2Wicri -a SrasV1
| This area was generated with Dilib version V0.6.33. |  |