Detection of coronavirus genomes in Moluccan naked-backed fruit bats in Indonesia.
Identifieur interne : 000E68 ( PubMed/Corpus ); précédent : 000E67; suivant : 000E69Detection of coronavirus genomes in Moluccan naked-backed fruit bats in Indonesia.
Auteurs : Paulina Duhita Anindita ; Michihito Sasaki ; Agus Setiyono ; Ekowati Handharyani ; Yasuko Orba ; Shintaro Kobayashi ; Ibnu Rahmadani ; Siswatiana Taha ; Sri Adiani ; Mawar Subangkit ; Ichiro Nakamura ; Hirofumi Sawa ; Takashi KimuraSource :
- Archives of virology [ 1432-8798 ] ; 2015.
English descriptors
- KwdEn :
- MESH :
- geographic : Indonesia.
- classification : Coronavirus.
- genetics : Coronavirus.
- isolation & purification : Coronavirus.
- virology : Chiroptera, Disease Reservoirs.
- Animals, Genome, Viral, Molecular Sequence Data, Phylogeny.
Abstract
Bats have been shown to serve as natural reservoirs for numerous emerging viruses including severe acute respiratory syndrome coronavirus (SARS-CoV). In the present study, we report the discovery of bat CoV genes in Indonesian Moluccan naked-backed fruit bats (Dobsonia moluccensis). A partial RNA-dependent RNA polymerase gene sequence was detected in feces and tissues samples from the fruit bats, and the region between the RdRp and helicase genes could also be amplified from fecal samples. Phylogenetic analysis suggested that these bat CoVs are related to members of the genus Betacoronavirus.
DOI: 10.1007/s00705-015-2342-1
PubMed: 25643817
Links to Exploration step
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Handharyani</name></author><author><name sortKey="Orba, Yasuko" sort="Orba, Yasuko" uniqKey="Orba Y" first="Yasuko" last="Orba">Yasuko Orba</name></author><author><name sortKey="Kobayashi, Shintaro" sort="Kobayashi, Shintaro" uniqKey="Kobayashi S" first="Shintaro" last="Kobayashi">Shintaro Kobayashi</name></author><author><name sortKey="Rahmadani, Ibnu" sort="Rahmadani, Ibnu" uniqKey="Rahmadani I" first="Ibnu" last="Rahmadani">Ibnu Rahmadani</name></author><author><name sortKey="Taha, Siswatiana" sort="Taha, Siswatiana" uniqKey="Taha S" first="Siswatiana" last="Taha">Siswatiana Taha</name></author><author><name sortKey="Adiani, Sri" sort="Adiani, Sri" uniqKey="Adiani S" first="Sri" last="Adiani">Sri Adiani</name></author><author><name sortKey="Subangkit, Mawar" sort="Subangkit, Mawar" uniqKey="Subangkit M" first="Mawar" last="Subangkit">Mawar Subangkit</name></author><author><name sortKey="Nakamura, Ichiro" sort="Nakamura, Ichiro" uniqKey="Nakamura I" first="Ichiro" last="Nakamura">Ichiro Nakamura</name></author><author><name sortKey="Sawa, Hirofumi" sort="Sawa, Hirofumi" uniqKey="Sawa H" first="Hirofumi" last="Sawa">Hirofumi Sawa</name></author><author><name sortKey="Kimura, Takashi" sort="Kimura, Takashi" uniqKey="Kimura T" first="Takashi" last="Kimura">Takashi Kimura</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2015">2015</date><idno type="RBID">pubmed:25643817</idno><idno type="pmid">25643817</idno><idno type="doi">10.1007/s00705-015-2342-1</idno><idno type="wicri:Area/PubMed/Corpus">000E68</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000E68</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Detection of coronavirus genomes in Moluccan naked-backed fruit bats in Indonesia.</title><author><name sortKey="Anindita, Paulina Duhita" sort="Anindita, Paulina Duhita" uniqKey="Anindita P" first="Paulina Duhita" last="Anindita">Paulina Duhita Anindita</name><affiliation><nlm:affiliation>Division of Molecular Pathobiology, Research Center for Zoonosis Control, Hokkaido University, North 20 West 10, Kita-ku, Sapporo, 001-0020, Japan.</nlm:affiliation></affiliation></author><author><name sortKey="Sasaki, Michihito" sort="Sasaki, Michihito" uniqKey="Sasaki M" first="Michihito" last="Sasaki">Michihito Sasaki</name></author><author><name sortKey="Setiyono, Agus" sort="Setiyono, Agus" uniqKey="Setiyono A" first="Agus" last="Setiyono">Agus Setiyono</name></author><author><name sortKey="Handharyani, Ekowati" sort="Handharyani, Ekowati" uniqKey="Handharyani E" first="Ekowati" last="Handharyani">Ekowati Handharyani</name></author><author><name sortKey="Orba, Yasuko" sort="Orba, Yasuko" uniqKey="Orba Y" first="Yasuko" last="Orba">Yasuko Orba</name></author><author><name sortKey="Kobayashi, Shintaro" sort="Kobayashi, Shintaro" uniqKey="Kobayashi S" first="Shintaro" last="Kobayashi">Shintaro Kobayashi</name></author><author><name sortKey="Rahmadani, Ibnu" sort="Rahmadani, Ibnu" uniqKey="Rahmadani I" first="Ibnu" last="Rahmadani">Ibnu Rahmadani</name></author><author><name sortKey="Taha, Siswatiana" sort="Taha, Siswatiana" uniqKey="Taha S" first="Siswatiana" last="Taha">Siswatiana Taha</name></author><author><name sortKey="Adiani, Sri" sort="Adiani, Sri" uniqKey="Adiani S" first="Sri" last="Adiani">Sri Adiani</name></author><author><name sortKey="Subangkit, Mawar" sort="Subangkit, Mawar" uniqKey="Subangkit M" first="Mawar" last="Subangkit">Mawar Subangkit</name></author><author><name sortKey="Nakamura, Ichiro" sort="Nakamura, Ichiro" uniqKey="Nakamura I" first="Ichiro" last="Nakamura">Ichiro Nakamura</name></author><author><name sortKey="Sawa, Hirofumi" sort="Sawa, Hirofumi" uniqKey="Sawa H" first="Hirofumi" last="Sawa">Hirofumi Sawa</name></author><author><name sortKey="Kimura, Takashi" sort="Kimura, Takashi" uniqKey="Kimura T" first="Takashi" last="Kimura">Takashi Kimura</name></author></analytic><series><title level="j">Archives of virology</title><idno type="eISSN">1432-8798</idno><imprint><date when="2015" type="published">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>Chiroptera (virology)</term><term>Coronavirus (classification)</term><term>Coronavirus (genetics)</term><term>Coronavirus (isolation & purification)</term><term>Disease Reservoirs (virology)</term><term>Genome, Viral</term><term>Indonesia</term><term>Molecular Sequence Data</term><term>Phylogeny</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Indonesia</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Chiroptera</term><term>Disease Reservoirs</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Genome, Viral</term><term>Molecular Sequence Data</term><term>Phylogeny</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Bats have been shown to serve as natural reservoirs for numerous emerging viruses including severe acute respiratory syndrome coronavirus (SARS-CoV). In the present study, we report the discovery of bat CoV genes in Indonesian Moluccan naked-backed fruit bats (Dobsonia moluccensis). A partial RNA-dependent RNA polymerase gene sequence was detected in feces and tissues samples from the fruit bats, and the region between the RdRp and helicase genes could also be amplified from fecal samples. Phylogenetic analysis suggested that these bat CoVs are related to members of the genus Betacoronavirus.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">25643817</PMID><DateCompleted><Year>2015</Year><Month>05</Month><Day>26</Day></DateCompleted><DateRevised><Year>2020</Year><Month>03</Month><Day>25</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1432-8798</ISSN><JournalIssue CitedMedium="Internet"><Volume>160</Volume><Issue>4</Issue><PubDate><Year>2015</Year><Month>Apr</Month></PubDate></JournalIssue><Title>Archives of virology</Title><ISOAbbreviation>Arch. Virol.</ISOAbbreviation></Journal><ArticleTitle>Detection of coronavirus genomes in Moluccan naked-backed fruit bats in Indonesia.</ArticleTitle><Pagination><MedlinePgn>1113-8</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s00705-015-2342-1</ELocationID><Abstract><AbstractText>Bats have been shown to serve as natural reservoirs for numerous emerging viruses including severe acute respiratory syndrome coronavirus (SARS-CoV). In the present study, we report the discovery of bat CoV genes in Indonesian Moluccan naked-backed fruit bats (Dobsonia moluccensis). A partial RNA-dependent RNA polymerase gene sequence was detected in feces and tissues samples from the fruit bats, and the region between the RdRp and helicase genes could also be amplified from fecal samples. Phylogenetic analysis suggested that these bat CoVs are related to members of the genus Betacoronavirus.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Anindita</LastName><ForeName>Paulina Duhita</ForeName><Initials>PD</Initials><AffiliationInfo><Affiliation>Division of Molecular Pathobiology, Research Center for Zoonosis Control, Hokkaido University, North 20 West 10, Kita-ku, Sapporo, 001-0020, Japan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sasaki</LastName><ForeName>Michihito</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Setiyono</LastName><ForeName>Agus</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Handharyani</LastName><ForeName>Ekowati</ForeName><Initials>E</Initials></Author><Author ValidYN="Y"><LastName>Orba</LastName><ForeName>Yasuko</ForeName><Initials>Y</Initials></Author><Author ValidYN="Y"><LastName>Kobayashi</LastName><ForeName>Shintaro</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Rahmadani</LastName><ForeName>Ibnu</ForeName><Initials>I</Initials></Author><Author ValidYN="Y"><LastName>Taha</LastName><ForeName>Siswatiana</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Adiani</LastName><ForeName>Sri</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Subangkit</LastName><ForeName>Mawar</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Nakamura</LastName><ForeName>Ichiro</ForeName><Initials>I</Initials></Author><Author ValidYN="Y"><LastName>Sawa</LastName><ForeName>Hirofumi</ForeName><Initials>H</Initials></Author><Author ValidYN="Y"><LastName>Kimura</LastName><ForeName>Takashi</ForeName><Initials>T</Initials></Author></AuthorList><Language>eng</Language><DataBankList 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