First Report of Coronaviruses in Northern European Bats.
Identifieur interne : 000875 ( PubMed/Corpus ); précédent : 000874; suivant : 000876First Report of Coronaviruses in Northern European Bats.
Auteurs : Ilkka Kivistö ; Eeva-Maria Tidenberg ; Thomas Lilley ; Kati Suominen ; Kristian M. Forbes ; Olli Vapalahti ; Anita Huovilainen ; Tarja SironenSource :
- Vector borne and zoonotic diseases (Larchmont, N.Y.) [ 1557-7759 ] ; 2020.
Abstract
Coronaviruses (CoVs) represent a global public health threat, exemplified by the severe acute respiratory syndrome (SARS) and Middle East respiratory syndrome (MERS) outbreaks. Using fecal samples collected from five bat species between 2014 and 2016 in Finland and RT-PCR, RT-qPCR, and NGS, we identified CoVs in 10 of 79 (13%) samples, including two novel bat species-CoV relationships. Phylogenetic analysis revealed Alphacoronavirus and Betacoronavirus species clustered among previously identified bat and human viruses. These results expand the known northern distribution and host species range of bat-borne CoVs.
DOI: 10.1089/vbz.2018.2367
PubMed: 31503522
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Forbes</name><affiliation><nlm:affiliation>Department of Biological Sciences, University of Arkansas, Fayetteville, Arkansas.</nlm:affiliation></affiliation></author><author><name sortKey="Vapalahti, Olli" sort="Vapalahti, Olli" uniqKey="Vapalahti O" first="Olli" last="Vapalahti">Olli Vapalahti</name><affiliation><nlm:affiliation>Department of Virology, University of Helsinki, Helsinki, Finland.</nlm:affiliation></affiliation></author><author><name sortKey="Huovilainen, Anita" sort="Huovilainen, Anita" uniqKey="Huovilainen A" first="Anita" last="Huovilainen">Anita Huovilainen</name><affiliation><nlm:affiliation>Laboratory and Research Division, Finnish Food Authority, Helsinki, Finland.</nlm:affiliation></affiliation></author><author><name sortKey="Sironen, Tarja" sort="Sironen, Tarja" uniqKey="Sironen T" first="Tarja" last="Sironen">Tarja Sironen</name><affiliation><nlm:affiliation>Department of Virology, University of Helsinki, Helsinki, Finland.</nlm:affiliation></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2020">2020</date><idno type="RBID">pubmed:31503522</idno><idno type="pmid">31503522</idno><idno type="doi">10.1089/vbz.2018.2367</idno><idno type="wicri:Area/PubMed/Corpus">000875</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000875</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">First Report of Coronaviruses in Northern European Bats.</title><author><name sortKey="Kivisto, Ilkka" sort="Kivisto, Ilkka" uniqKey="Kivisto I" first="Ilkka" last="Kivistö">Ilkka Kivistö</name><affiliation><nlm:affiliation>Department of Virology, University of Helsinki, Helsinki, Finland.</nlm:affiliation></affiliation></author><author><name sortKey="Tidenberg, Eeva Maria" sort="Tidenberg, Eeva Maria" uniqKey="Tidenberg E" first="Eeva-Maria" last="Tidenberg">Eeva-Maria Tidenberg</name><affiliation><nlm:affiliation>Zoology Unit, Finnish Museum of Natural History, Helsinki, Finland.</nlm:affiliation></affiliation></author><author><name sortKey="Lilley, Thomas" sort="Lilley, Thomas" uniqKey="Lilley T" first="Thomas" last="Lilley">Thomas Lilley</name><affiliation><nlm:affiliation>Zoology Unit, Finnish Museum of Natural History, Helsinki, Finland.</nlm:affiliation></affiliation></author><author><name sortKey="Suominen, Kati" sort="Suominen, Kati" uniqKey="Suominen K" first="Kati" last="Suominen">Kati Suominen</name><affiliation><nlm:affiliation>Zoology Unit, Finnish Museum of Natural History, Helsinki, Finland.</nlm:affiliation></affiliation></author><author><name sortKey="Forbes, Kristian M" sort="Forbes, Kristian M" uniqKey="Forbes K" first="Kristian M" last="Forbes">Kristian M. Forbes</name><affiliation><nlm:affiliation>Department of Biological Sciences, University of Arkansas, Fayetteville, Arkansas.</nlm:affiliation></affiliation></author><author><name sortKey="Vapalahti, Olli" sort="Vapalahti, Olli" uniqKey="Vapalahti O" first="Olli" last="Vapalahti">Olli Vapalahti</name><affiliation><nlm:affiliation>Department of Virology, University of Helsinki, Helsinki, Finland.</nlm:affiliation></affiliation></author><author><name sortKey="Huovilainen, Anita" sort="Huovilainen, Anita" uniqKey="Huovilainen A" first="Anita" last="Huovilainen">Anita Huovilainen</name><affiliation><nlm:affiliation>Laboratory and Research Division, Finnish Food Authority, Helsinki, Finland.</nlm:affiliation></affiliation></author><author><name sortKey="Sironen, Tarja" sort="Sironen, Tarja" uniqKey="Sironen T" first="Tarja" last="Sironen">Tarja Sironen</name><affiliation><nlm:affiliation>Department of Virology, University of Helsinki, Helsinki, Finland.</nlm:affiliation></affiliation></author></analytic><series><title level="j">Vector borne and zoonotic diseases (Larchmont, N.Y.)</title><idno type="eISSN">1557-7759</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Coronaviruses (CoVs) represent a global public health threat, exemplified by the severe acute respiratory syndrome (SARS) and Middle East respiratory syndrome (MERS) outbreaks. Using fecal samples collected from five bat species between 2014 and 2016 in Finland and RT-PCR, RT-qPCR, and NGS, we identified CoVs in 10 of 79 (13%) samples, including two novel bat species-CoV relationships. Phylogenetic analysis revealed <i>Alphacoronavirus</i> and <i>Betacoronavirus</i> species clustered among previously identified bat and human viruses. These results expand the known northern distribution and host species range of bat-borne CoVs.</div></front></TEI><pubmed><MedlineCitation Status="In-Data-Review" Owner="NLM"><PMID Version="1">31503522</PMID><DateRevised><Year>2020</Year><Month>02</Month><Day>19</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1557-7759</ISSN><JournalIssue CitedMedium="Internet"><Volume>20</Volume><Issue>2</Issue><PubDate><Year>2020</Year><Month>Feb</Month></PubDate></JournalIssue><Title>Vector borne and zoonotic diseases (Larchmont, N.Y.)</Title><ISOAbbreviation>Vector Borne Zoonotic Dis.</ISOAbbreviation></Journal><ArticleTitle>First Report of Coronaviruses in Northern European Bats.</ArticleTitle><Pagination><MedlinePgn>155-158</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1089/vbz.2018.2367</ELocationID><Abstract><AbstractText>Coronaviruses (CoVs) represent a global public health threat, exemplified by the severe acute respiratory syndrome (SARS) and Middle East respiratory syndrome (MERS) outbreaks. Using fecal samples collected from five bat species between 2014 and 2016 in Finland and RT-PCR, RT-qPCR, and NGS, we identified CoVs in 10 of 79 (13%) samples, including two novel bat species-CoV relationships. Phylogenetic analysis revealed <i>Alphacoronavirus</i> and <i>Betacoronavirus</i> species clustered among previously identified bat and human viruses. These results expand the known northern distribution and host species range of bat-borne CoVs.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Kivistö</LastName><ForeName>Ilkka</ForeName><Initials>I</Initials><AffiliationInfo><Affiliation>Department of Virology, University of Helsinki, Helsinki, Finland.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Veterinary Biosciences, University of Helsinki, Helsinki, Finland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tidenberg</LastName><ForeName>Eeva-Maria</ForeName><Initials>EM</Initials><AffiliationInfo><Affiliation>Zoology Unit, Finnish Museum of Natural History, Helsinki, Finland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lilley</LastName><ForeName>Thomas</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Zoology Unit, Finnish Museum of Natural History, Helsinki, Finland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Suominen</LastName><ForeName>Kati</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Zoology Unit, Finnish Museum of Natural History, Helsinki, Finland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Forbes</LastName><ForeName>Kristian M</ForeName><Initials>KM</Initials><AffiliationInfo><Affiliation>Department of Biological Sciences, University of Arkansas, Fayetteville, Arkansas.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Vapalahti</LastName><ForeName>Olli</ForeName><Initials>O</Initials><AffiliationInfo><Affiliation>Department of Virology, University of Helsinki, Helsinki, Finland.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Veterinary Biosciences, University of Helsinki, Helsinki, Finland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Huovilainen</LastName><ForeName>Anita</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Laboratory and Research Division, Finnish Food Authority, Helsinki, Finland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sironen</LastName><ForeName>Tarja</ForeName><Initials>T</Initials><AffiliationInfo><Affiliation>Department of Virology, University of Helsinki, Helsinki, Finland.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Veterinary Biosciences, University of Helsinki, Helsinki, Finland.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2019</Year><Month>09</Month><Day>10</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Vector Borne Zoonotic Dis</MedlineTA><NlmUniqueID>100965525</NlmUniqueID><ISSNLinking>1530-3667</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Chiroptera</Keyword><Keyword MajorTopicYN="N">Finland</Keyword><Keyword MajorTopicYN="N">coronavirus</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2019</Year><Month>9</Month><Day>11</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2019</Year><Month>9</Month><Day>11</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2019</Year><Month>9</Month><Day>11</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">31503522</ArticleId><ArticleId IdType="doi">10.1089/vbz.2018.2367</ArticleId></ArticleIdList></PubmedData></pubmed></record>Pour manipuler ce document sous Unix (Dilib)
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