Coronavirus phylogeny based on 2D graphical representation of DNA sequence.
Identifieur interne : 002245 ( PubMed/Checkpoint ); précédent : 002244; suivant : 002246Coronavirus phylogeny based on 2D graphical representation of DNA sequence.
Auteurs : Bo Liao [République populaire de Chine] ; Xuyu Xiang ; Wen ZhuSource :
- Journal of computational chemistry [ 0192-8651 ] ; 2006.
Descripteurs français
- KwdFr :
- MESH :
- analyse : ADN.
- génétique : ADN, Coronavirus, Génome viral, Pan troglodytes.
- Animaux, Coronavirus, Phylogénie, Séquence nucléotidique.
English descriptors
- KwdEn :
- MESH :
- chemical , analysis : DNA.
- classification : Coronavirus.
- genetics : Coronavirus, DNA, Genome, Viral, Pan troglodytes.
- Animals, Base Sequence, Phylogeny.
Abstract
A novel coronavirus has been identified as the cause of the outbreak of severe acute respiratory syndrome (SARS). Previous phylogenetic analyses based on sequence alignments show that SARS-CoVs form a new group distantly related to the other three groups of previously characterized coronaviruses. In this aritcle, a new approach based on the 2D graphical representation of the whole genome sequence is proposed to analyze the phylogenetic relationships of coronaviruses. The evolutionary distances are obtained through measuring the differences among the two-dimensional curves.
DOI: 10.1002/jcc.20439
PubMed: 16752365
Affiliations:
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pubmed:16752365Le document en format XML
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Previous phylogenetic analyses based on sequence alignments show that SARS-CoVs form a new group distantly related to the other three groups of previously characterized coronaviruses. In this aritcle, a new approach based on the 2D graphical representation of the whole genome sequence is proposed to analyze the phylogenetic relationships of coronaviruses. 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Previous phylogenetic analyses based on sequence alignments show that SARS-CoVs form a new group distantly related to the other three groups of previously characterized coronaviruses. In this aritcle, a new approach based on the 2D graphical representation of the whole genome sequence is proposed to analyze the phylogenetic relationships of coronaviruses. 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