Mosaic structure of human coronavirus NL63, one thousand years of evolution.
Identifieur interne : 002101 ( PubMed/Checkpoint ); précédent : 002100; suivant : 002102Mosaic structure of human coronavirus NL63, one thousand years of evolution.
Auteurs : Krzysztof Pyrc [Pays-Bas] ; Ronald Dijkman ; Lea Deng ; Maarten F. Jebbink ; Howard A. Ross ; Ben Berkhout ; Lia Van Der HoekSource :
- Journal of molecular biology [ 0022-2836 ] ; 2006.
Descripteurs français
- KwdFr :
- Algorithmes, Coronavirus (), Coronavirus (génétique), Données de séquences moléculaires, Facteurs temps, Génome viral, Humains, Infections à coronavirus (virologie), Laryngite diphtérique, Phylogénie, RT-PCR, Similitude de séquences d'acides nucléiques, Spécificité d'espèce, Séquence nucléotidique, Évolution biologique.
- MESH :
- génétique : Coronavirus.
- virologie : Infections à coronavirus.
- Algorithmes, Coronavirus, Données de séquences moléculaires, Facteurs temps, Génome viral, Humains, Laryngite diphtérique, Phylogénie, RT-PCR, Similitude de séquences d'acides nucléiques, Spécificité d'espèce, Séquence nucléotidique, Évolution biologique.
English descriptors
- KwdEn :
- Algorithms, Base Sequence, Biological Evolution, Coronavirus (classification), Coronavirus (genetics), Coronavirus Infections (virology), Croup, Genome, Viral, Humans, Molecular Sequence Data, Phylogeny, Reverse Transcriptase Polymerase Chain Reaction, Sequence Homology, Nucleic Acid, Species Specificity, Time Factors.
- MESH :
- classification : Coronavirus.
- genetics : Coronavirus.
- virology : Coronavirus Infections.
- Algorithms, Base Sequence, Biological Evolution, Croup, Genome, Viral, Humans, Molecular Sequence Data, Phylogeny, Reverse Transcriptase Polymerase Chain Reaction, Sequence Homology, Nucleic Acid, Species Specificity, Time Factors.
Abstract
Before the SARS outbreak only two human coronaviruses (HCoV) were known: HCoV-OC43 and HCoV-229E. With the discovery of SARS-CoV in 2003, a third family member was identified. Soon thereafter, we described the fourth human coronavirus (HCoV-NL63), a virus that has spread worldwide and is associated with croup in children. We report here the complete genome sequence of two HCoV-NL63 clinical isolates, designated Amsterdam 57 and Amsterdam 496. The genomes are 27,538 and 27,550 nucleotides long, respectively, and share the same genome organization. We identified two variable regions, one within the 1a and one within the S gene, whereas the 1b and N genes were most conserved. Phylogenetic analysis revealed that HCoV-NL63 genomes have a mosaic structure with multiple recombination sites. Additionally, employing three different algorithms, we assessed the evolutionary rate for the S gene of group Ib coronaviruses to be approximately 3 x 10(-4) substitutions per site per year. Using this evolutionary rate we determined that HCoV-NL63 diverged in the 11th century from its closest relative HCoV-229E.
DOI: 10.1016/j.jmb.2006.09.074
PubMed: 17054987
Affiliations:
Links toward previous steps (curation, corpus...)
Links to Exploration step
pubmed:17054987Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Mosaic structure of human coronavirus NL63, one thousand years of evolution.</title><author><name sortKey="Pyrc, Krzysztof" sort="Pyrc, Krzysztof" uniqKey="Pyrc K" first="Krzysztof" last="Pyrc">Krzysztof Pyrc</name><affiliation wicri:level="4"><nlm:affiliation>Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center, University of Amsterdam, Meibergdreef 15, 1105 AZ, Amsterdam, The Netherlands. k.a.pyrc@amc.uva.nl</nlm:affiliation><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center, University of Amsterdam, Meibergdreef 15, 1105 AZ, Amsterdam</wicri:regionArea><placeName><settlement type="city">Amsterdam</settlement><region nuts="2" type="province">Hollande-Septentrionale</region></placeName><orgName type="university">Université d'Amsterdam</orgName></affiliation></author><author><name sortKey="Dijkman, Ronald" sort="Dijkman, Ronald" uniqKey="Dijkman R" first="Ronald" last="Dijkman">Ronald Dijkman</name></author><author><name sortKey="Deng, Lea" sort="Deng, Lea" uniqKey="Deng L" first="Lea" last="Deng">Lea Deng</name></author><author><name sortKey="Jebbink, Maarten F" sort="Jebbink, Maarten F" uniqKey="Jebbink M" first="Maarten F" last="Jebbink">Maarten F. Jebbink</name></author><author><name sortKey="Ross, Howard A" sort="Ross, Howard A" uniqKey="Ross H" first="Howard A" last="Ross">Howard A. Ross</name></author><author><name sortKey="Berkhout, Ben" sort="Berkhout, Ben" uniqKey="Berkhout B" first="Ben" last="Berkhout">Ben Berkhout</name></author><author><name sortKey="Van Der Hoek, Lia" sort="Van Der Hoek, Lia" uniqKey="Van Der Hoek L" first="Lia" last="Van Der Hoek">Lia Van Der Hoek</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2006">2006</date><idno type="RBID">pubmed:17054987</idno><idno type="pmid">17054987</idno><idno type="doi">10.1016/j.jmb.2006.09.074</idno><idno type="wicri:Area/PubMed/Corpus">002011</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">002011</idno><idno type="wicri:Area/PubMed/Curation">002011</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">002011</idno><idno type="wicri:Area/PubMed/Checkpoint">002101</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">002101</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Mosaic structure of human coronavirus NL63, one thousand years of evolution.</title><author><name sortKey="Pyrc, Krzysztof" sort="Pyrc, Krzysztof" uniqKey="Pyrc K" first="Krzysztof" last="Pyrc">Krzysztof Pyrc</name><affiliation wicri:level="4"><nlm:affiliation>Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center, University of Amsterdam, Meibergdreef 15, 1105 AZ, Amsterdam, The Netherlands. k.a.pyrc@amc.uva.nl</nlm:affiliation><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center, University of Amsterdam, Meibergdreef 15, 1105 AZ, Amsterdam</wicri:regionArea><placeName><settlement type="city">Amsterdam</settlement><region nuts="2" type="province">Hollande-Septentrionale</region></placeName><orgName type="university">Université d'Amsterdam</orgName></affiliation></author><author><name sortKey="Dijkman, Ronald" sort="Dijkman, Ronald" uniqKey="Dijkman R" first="Ronald" last="Dijkman">Ronald Dijkman</name></author><author><name sortKey="Deng, Lea" sort="Deng, Lea" uniqKey="Deng L" first="Lea" last="Deng">Lea Deng</name></author><author><name sortKey="Jebbink, Maarten F" sort="Jebbink, Maarten F" uniqKey="Jebbink M" first="Maarten F" last="Jebbink">Maarten F. Jebbink</name></author><author><name sortKey="Ross, Howard A" sort="Ross, Howard A" uniqKey="Ross H" first="Howard A" last="Ross">Howard A. Ross</name></author><author><name sortKey="Berkhout, Ben" sort="Berkhout, Ben" uniqKey="Berkhout B" first="Ben" last="Berkhout">Ben Berkhout</name></author><author><name sortKey="Van Der Hoek, Lia" sort="Van Der Hoek, Lia" uniqKey="Van Der Hoek L" first="Lia" last="Van Der Hoek">Lia Van Der Hoek</name></author></analytic><series><title level="j">Journal of molecular biology</title><idno type="ISSN">0022-2836</idno><imprint><date when="2006" type="published">2006</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Algorithms</term><term>Base Sequence</term><term>Biological Evolution</term><term>Coronavirus (classification)</term><term>Coronavirus (genetics)</term><term>Coronavirus Infections (virology)</term><term>Croup</term><term>Genome, Viral</term><term>Humans</term><term>Molecular Sequence Data</term><term>Phylogeny</term><term>Reverse Transcriptase Polymerase Chain Reaction</term><term>Sequence Homology, Nucleic Acid</term><term>Species Specificity</term><term>Time Factors</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Algorithmes</term><term>Coronavirus ()</term><term>Coronavirus (génétique)</term><term>Données de séquences moléculaires</term><term>Facteurs temps</term><term>Génome viral</term><term>Humains</term><term>Infections à coronavirus (virologie)</term><term>Laryngite diphtérique</term><term>Phylogénie</term><term>RT-PCR</term><term>Similitude de séquences d'acides nucléiques</term><term>Spécificité d'espèce</term><term>Séquence nucléotidique</term><term>Évolution biologique</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Infections à coronavirus</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Coronavirus Infections</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Algorithms</term><term>Base Sequence</term><term>Biological Evolution</term><term>Croup</term><term>Genome, Viral</term><term>Humans</term><term>Molecular Sequence Data</term><term>Phylogeny</term><term>Reverse Transcriptase Polymerase Chain Reaction</term><term>Sequence Homology, Nucleic Acid</term><term>Species Specificity</term><term>Time Factors</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Algorithmes</term><term>Coronavirus</term><term>Données de séquences moléculaires</term><term>Facteurs temps</term><term>Génome viral</term><term>Humains</term><term>Laryngite diphtérique</term><term>Phylogénie</term><term>RT-PCR</term><term>Similitude de séquences d'acides nucléiques</term><term>Spécificité d'espèce</term><term>Séquence nucléotidique</term><term>Évolution biologique</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Before the SARS outbreak only two human coronaviruses (HCoV) were known: HCoV-OC43 and HCoV-229E. With the discovery of SARS-CoV in 2003, a third family member was identified. Soon thereafter, we described the fourth human coronavirus (HCoV-NL63), a virus that has spread worldwide and is associated with croup in children. We report here the complete genome sequence of two HCoV-NL63 clinical isolates, designated Amsterdam 57 and Amsterdam 496. The genomes are 27,538 and 27,550 nucleotides long, respectively, and share the same genome organization. We identified two variable regions, one within the 1a and one within the S gene, whereas the 1b and N genes were most conserved. Phylogenetic analysis revealed that HCoV-NL63 genomes have a mosaic structure with multiple recombination sites. Additionally, employing three different algorithms, we assessed the evolutionary rate for the S gene of group Ib coronaviruses to be approximately 3 x 10(-4) substitutions per site per year. Using this evolutionary rate we determined that HCoV-NL63 diverged in the 11th century from its closest relative HCoV-229E.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">17054987</PMID><DateCompleted><Year>2007</Year><Month>01</Month><Day>18</Day></DateCompleted><DateRevised><Year>2020</Year><Month>03</Month><Day>26</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0022-2836</ISSN><JournalIssue CitedMedium="Print"><Volume>364</Volume><Issue>5</Issue><PubDate><Year>2006</Year><Month>Dec</Month><Day>15</Day></PubDate></JournalIssue><Title>Journal of molecular biology</Title><ISOAbbreviation>J. Mol. Biol.</ISOAbbreviation></Journal><ArticleTitle>Mosaic structure of human coronavirus NL63, one thousand years of evolution.</ArticleTitle><Pagination><MedlinePgn>964-73</MedlinePgn></Pagination><Abstract><AbstractText>Before the SARS outbreak only two human coronaviruses (HCoV) were known: HCoV-OC43 and HCoV-229E. With the discovery of SARS-CoV in 2003, a third family member was identified. Soon thereafter, we described the fourth human coronavirus (HCoV-NL63), a virus that has spread worldwide and is associated with croup in children. We report here the complete genome sequence of two HCoV-NL63 clinical isolates, designated Amsterdam 57 and Amsterdam 496. The genomes are 27,538 and 27,550 nucleotides long, respectively, and share the same genome organization. We identified two variable regions, one within the 1a and one within the S gene, whereas the 1b and N genes were most conserved. Phylogenetic analysis revealed that HCoV-NL63 genomes have a mosaic structure with multiple recombination sites. Additionally, employing three different algorithms, we assessed the evolutionary rate for the S gene of group Ib coronaviruses to be approximately 3 x 10(-4) substitutions per site per year. Using this evolutionary rate we determined that HCoV-NL63 diverged in the 11th century from its closest relative HCoV-229E.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Pyrc</LastName><ForeName>Krzysztof</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Laboratory of Experimental Virology, Department of Medical Microbiology, Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center, University of Amsterdam, Meibergdreef 15, 1105 AZ, Amsterdam, The Netherlands. k.a.pyrc@amc.uva.nl</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Dijkman</LastName><ForeName>Ronald</ForeName><Initials>R</Initials></Author><Author ValidYN="Y"><LastName>Deng</LastName><ForeName>Lea</ForeName><Initials>L</Initials></Author><Author ValidYN="Y"><LastName>Jebbink</LastName><ForeName>Maarten F</ForeName><Initials>MF</Initials></Author><Author ValidYN="Y"><LastName>Ross</LastName><ForeName>Howard A</ForeName><Initials>HA</Initials></Author><Author ValidYN="Y"><LastName>Berkhout</LastName><ForeName>Ben</ForeName><Initials>B</Initials></Author><Author ValidYN="Y"><LastName>van der Hoek</LastName><ForeName>Lia</ForeName><Initials>L</Initials></Author></AuthorList><Language>eng</Language><DataBankList CompleteYN="Y"><DataBank><DataBankName>GENBANK</DataBankName><AccessionNumberList><AccessionNumber>AF304460</AccessionNumber><AccessionNumber>AF353511</AccessionNumber><AccessionNumber>AY518894</AccessionNumber><AccessionNumber>AY567488</AccessionNumber><AccessionNumber>AY567489</AccessionNumber><AccessionNumber>AY567493</AccessionNumber><AccessionNumber>AY567494</AccessionNumber><AccessionNumber>DQ445911</AccessionNumber><AccessionNumber>DQ445912</AccessionNumber><AccessionNumber>DQ462752</AccessionNumber><AccessionNumber>DQ462753</AccessionNumber><AccessionNumber>DQ462754</AccessionNumber><AccessionNumber>DQ462755</AccessionNumber><AccessionNumber>DQ462756</AccessionNumber><AccessionNumber>DQ462757</AccessionNumber><AccessionNumber>DQ462758</AccessionNumber><AccessionNumber>DQ462759</AccessionNumber><AccessionNumber>DQ462760</AccessionNumber><AccessionNumber>DQ462761</AccessionNumber><AccessionNumber>DQ462762</AccessionNumber><AccessionNumber>DQ462763</AccessionNumber><AccessionNumber>DQ462764</AccessionNumber><AccessionNumber>DQ462765</AccessionNumber><AccessionNumber>DQ462766</AccessionNumber><AccessionNumber>DQ462767</AccessionNumber><AccessionNumber>DQ462768</AccessionNumber><AccessionNumber>DQ462769</AccessionNumber><AccessionNumber>DQ462770</AccessionNumber><AccessionNumber>DQ462771</AccessionNumber><AccessionNumber>DQ462772</AccessionNumber><AccessionNumber>DQ462773</AccessionNumber><AccessionNumber>DQ462774</AccessionNumber><AccessionNumber>DQ462775</AccessionNumber><AccessionNumber>DQ462776</AccessionNumber><AccessionNumber>DQ462777</AccessionNumber><AccessionNumber>DQ462778</AccessionNumber><AccessionNumber>DQ462779</AccessionNumber><AccessionNumber>DQ462780</AccessionNumber><AccessionNumber>DQ462781</AccessionNumber><AccessionNumber>DQ462782</AccessionNumber><AccessionNumber>DQ462783</AccessionNumber><AccessionNumber>DQ462784</AccessionNumber><AccessionNumber>DQ462785</AccessionNumber><AccessionNumber>DQ462786</AccessionNumber><AccessionNumber>DQ462787</AccessionNumber><AccessionNumber>DQ462788</AccessionNumber><AccessionNumber>DQ462789</AccessionNumber><AccessionNumber>DQ462790</AccessionNumber><AccessionNumber>DQ462791</AccessionNumber><AccessionNumber>DQ462792</AccessionNumber></AccessionNumberList></DataBank><DataBank><DataBankName>RefSeq</DataBankName><AccessionNumberList><AccessionNumber>NC_005831</AccessionNumber></AccessionNumberList></DataBank></DataBankList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2006</Year><Month>10</Month><Day>03</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>J Mol Biol</MedlineTA><NlmUniqueID>2985088R</NlmUniqueID><ISSNLinking>0022-2836</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000465" MajorTopicYN="N">Algorithms</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D001483" MajorTopicYN="N">Base Sequence</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005075" MajorTopicYN="Y">Biological Evolution</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017934" MajorTopicYN="N">Coronavirus</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018352" MajorTopicYN="N">Coronavirus Infections</DescriptorName><QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D003440" MajorTopicYN="N">Croup</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016679" MajorTopicYN="Y">Genome, Viral</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D006801" MajorTopicYN="N">Humans</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020133" MajorTopicYN="N">Reverse Transcriptase Polymerase Chain Reaction</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012689" MajorTopicYN="N">Sequence Homology, Nucleic Acid</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013045" MajorTopicYN="N">Species Specificity</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013997" MajorTopicYN="N">Time Factors</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2006</Year><Month>08</Month><Day>25</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2006</Year><Month>09</Month><Day>24</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2006</Year><Month>09</Month><Day>25</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2006</Year><Month>10</Month><Day>24</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2007</Year><Month>1</Month><Day>19</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2006</Year><Month>10</Month><Day>24</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">17054987</ArticleId><ArticleId IdType="pii">S0022-2836(06)01298-8</ArticleId><ArticleId IdType="doi">10.1016/j.jmb.2006.09.074</ArticleId><ArticleId IdType="pmc">PMC7094706</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Pediatr Infect Dis J. 2005 Nov;24(11):1015-7</Citation><ArticleIdList><ArticleId IdType="pubmed">16282944</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Virol J. 2004 Nov 17;1:7</Citation><ArticleIdList><ArticleId IdType="pubmed">15548333</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 2006 Jul;80(14):7136-45</Citation><ArticleIdList><ArticleId IdType="pubmed">16809319</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 1986 Mar;57(3):729-37</Citation><ArticleIdList><ArticleId IdType="pubmed">3005623</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Med Virol. 2005 Mar;75(3):455-62</Citation><ArticleIdList><ArticleId IdType="pubmed">15648064</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Mol Biol Evol. 2001 Jul;18(7):1365-71</Citation><ArticleIdList><ArticleId IdType="pubmed">11420374</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Med Virol. 2005 Mar;75(3):463-5</Citation><ArticleIdList><ArticleId IdType="pubmed">15648061</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Genetics. 2002 Jul;161(3):1307-20</Citation><ArticleIdList><ArticleId IdType="pubmed">12136032</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Adv Exp Med Biol. 1993;342:255-7</Citation><ArticleIdList><ArticleId IdType="pubmed">8209739</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 2005 Feb;79(3):1595-604</Citation><ArticleIdList><ArticleId IdType="pubmed">15650185</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Clin Infect Dis. 2005 Jun 15;40(12):1721-9</Citation><ArticleIdList><ArticleId IdType="pubmed">15909257</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Genetics. 1998 Mar;148(3):929-36</Citation><ArticleIdList><ArticleId IdType="pubmed">9539414</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 1998 May;72(5):4508-14</Citation><ArticleIdList><ArticleId IdType="pubmed">9557750</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Infect Dis. 2005 Feb 15;191(4):499-502</Citation><ArticleIdList><ArticleId IdType="pubmed">15655771</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 1985 Nov;56(2):449-56</Citation><ArticleIdList><ArticleId IdType="pubmed">2997467</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 2003 Sep;77(17):9567-77</Citation><ArticleIdList><ArticleId IdType="pubmed">12915570</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 2005 Mar;79(5):3223-4; author reply 3224-5</Citation><ArticleIdList><ArticleId IdType="pubmed">15709046</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Proc Natl Acad Sci U S A. 2001 Feb 13;98(4):1889-94</Citation><ArticleIdList><ArticleId IdType="pubmed">11172046</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Virology. 2005 Sep 30;340(2):209-23</Citation><ArticleIdList><ArticleId IdType="pubmed">16051301</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Emerg Infect Dis. 2005 Aug;11(8):1225-9</Citation><ArticleIdList><ArticleId IdType="pubmed">16102311</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Antimicrob Agents Chemother. 2006 Jun;50(6):2000-8</Citation><ArticleIdList><ArticleId IdType="pubmed">16723558</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Infect Dis. 2005 Feb 15;191(4):503-6</Citation><ArticleIdList><ArticleId IdType="pubmed">15655772</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Proc Natl Acad Sci U S A. 2004 Apr 20;101(16):6212-6</Citation><ArticleIdList><ArticleId IdType="pubmed">15073334</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 1995 Sep;69(9):5269-77</Citation><ArticleIdList><ArticleId IdType="pubmed">7636969</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Virology. 1992 Sep;190(1):92-105</Citation><ArticleIdList><ArticleId IdType="pubmed">1326823</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>PLoS Med. 2005 Aug;2(8):e240</Citation><ArticleIdList><ArticleId IdType="pubmed">16104827</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Proc Natl Acad Sci U S A. 2005 May 31;102(22):7988-93</Citation><ArticleIdList><ArticleId IdType="pubmed">15897467</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 1999 Jan;73(1):152-60</Citation><ArticleIdList><ArticleId IdType="pubmed">9847317</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Virology. 1995 Nov 10;213(2):569-80</Citation><ArticleIdList><ArticleId IdType="pubmed">7491781</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Virus Res. 1985 Jul;3(1):19-33</Citation><ArticleIdList><ArticleId IdType="pubmed">2992183</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 2006 Jul;80(14):7270-4</Citation><ArticleIdList><ArticleId IdType="pubmed">16809333</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Mol Biol Evol. 2000 Dec;17(12):1807-15</Citation><ArticleIdList><ArticleId IdType="pubmed">11110896</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Vaccine. 1990 Dec;8(6):605-8</Citation><ArticleIdList><ArticleId IdType="pubmed">1708184</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Clin Microbiol. 2000 Dec;38(12):4523-6</Citation><ArticleIdList><ArticleId IdType="pubmed">11101590</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Comput Appl Biosci. 1997 Oct;13(5):555-6</Citation><ArticleIdList><ArticleId IdType="pubmed">9367129</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 1999 Jul;73(7):5957-69</Citation><ArticleIdList><ArticleId IdType="pubmed">10364348</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Infect Dis. 2005 Jul 15;192(2):351-2; author reply 353</Citation><ArticleIdList><ArticleId IdType="pubmed">15962233</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Nat Med. 2004 Apr;10(4):368-73</Citation><ArticleIdList><ArticleId IdType="pubmed">15034574</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 2005 Jan;79(2):884-95</Citation><ArticleIdList><ArticleId IdType="pubmed">15613317</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Virology. 1993 Feb;192(2):710-6</Citation><ArticleIdList><ArticleId IdType="pubmed">8380672</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Infect Dis. 2005 Nov 15;192(10):1767-71</Citation><ArticleIdList><ArticleId IdType="pubmed">16235175</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Mol Evol. 1984-1985;21(2):150-60</Citation><ArticleIdList><ArticleId IdType="pubmed">6100189</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 2005 Feb;79(4):2001-9</Citation><ArticleIdList><ArticleId IdType="pubmed">15681402</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Pediatr Infect Dis J. 2005 Jul;24(7):645-6</Citation><ArticleIdList><ArticleId IdType="pubmed">15999010</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Clin Microbiol. 2005 Sep;43(9):4567-73</Citation><ArticleIdList><ArticleId IdType="pubmed">16145108</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>Arch Virol. 1995;140(2):259-71</Citation><ArticleIdList><ArticleId IdType="pubmed">7710354</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 1988 May;62(5):1810-3</Citation><ArticleIdList><ArticleId IdType="pubmed">2833625</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>BMC Infect Dis. 2005 Feb 01;5:6</Citation><ArticleIdList><ArticleId IdType="pubmed">15686594</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Infect Dis. 2006 Jan 15;193(2):283-6</Citation><ArticleIdList><ArticleId IdType="pubmed">16362893</ArticleId></ArticleIdList></Reference></ReferenceList><ReferenceList><Reference><Citation>J Virol. 2005 Nov;79(21):13399-411</Citation><ArticleIdList><ArticleId IdType="pubmed">16227261</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Pays-Bas</li></country><region><li>Hollande-Septentrionale</li></region><settlement><li>Amsterdam</li></settlement><orgName><li>Université d'Amsterdam</li></orgName></list><tree><noCountry><name sortKey="Berkhout, Ben" sort="Berkhout, Ben" uniqKey="Berkhout B" first="Ben" last="Berkhout">Ben Berkhout</name><name sortKey="Deng, Lea" sort="Deng, Lea" uniqKey="Deng L" first="Lea" last="Deng">Lea Deng</name><name sortKey="Dijkman, Ronald" sort="Dijkman, Ronald" uniqKey="Dijkman R" first="Ronald" last="Dijkman">Ronald Dijkman</name><name sortKey="Jebbink, Maarten F" sort="Jebbink, Maarten F" uniqKey="Jebbink M" first="Maarten F" last="Jebbink">Maarten F. Jebbink</name><name sortKey="Ross, Howard A" sort="Ross, Howard A" uniqKey="Ross H" first="Howard A" last="Ross">Howard A. Ross</name><name sortKey="Van Der Hoek, Lia" sort="Van Der Hoek, Lia" uniqKey="Van Der Hoek L" first="Lia" last="Van Der Hoek">Lia Van Der Hoek</name></noCountry><country name="Pays-Bas"><region name="Hollande-Septentrionale"><name sortKey="Pyrc, Krzysztof" sort="Pyrc, Krzysztof" uniqKey="Pyrc K" first="Krzysztof" last="Pyrc">Krzysztof Pyrc</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/PubMed/Checkpoint
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 002101 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/PubMed/Checkpoint/biblio.hfd -nk 002101 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Sante
|area= SrasV1
|flux= PubMed
|étape= Checkpoint
|type= RBID
|clé= pubmed:17054987
|texte= Mosaic structure of human coronavirus NL63, one thousand years of evolution.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/PubMed/Checkpoint/RBID.i -Sk "pubmed:17054987" \
| HfdSelect -Kh $EXPLOR_AREA/Data/PubMed/Checkpoint/biblio.hfd \
| NlmPubMed2Wicri -a SrasV1
| This area was generated with Dilib version V0.6.33. |  |