SrasV1, PubMed, Checkpoint, bibRecord, 000C85

Coronavirus Infection and Diversity in Bats in the Australasian Region.

Identifieur interne : 000C85 ( PubMed/Checkpoint ); précédent : 000C84; suivant : 000C86

Coronavirus Infection and Diversity in Bats in the Australasian Region.

Auteurs : C S Smith [Australie] ; C E De Jong [Australie] ; J. Meers [Australie] ; J. Henning [Australie] ; L- F. Wang [Singapour] ; H E Field [Australie]

Source :

EcoHealth [ 1612-9210 ] ; 2016.

RBID : pubmed:27048154

Descripteurs français

KwdFr :
- ARN viral (génétique), Animaux, Australasie (épidémiologie), Chiroptera (virologie), Coronavirus (génétique), Coronavirus (isolement et purification), Génome viral, Génotype, Infections à coronavirus (médecine vétérinaire), Infections à coronavirus (virologie), Infections à coronavirus (épidémiologie), Phylogénie, Prévalence, Réaction de polymérisation en chaîne, Syndrome respiratoire aigu sévère (médecine vétérinaire), Séquence nucléotidique, Taïwan (épidémiologie).
MESH :
- génétique : ARN viral, Coronavirus.
- isolement et purification : Coronavirus.
- médecine vétérinaire : Infections à coronavirus, Syndrome respiratoire aigu sévère.
- virologie : Chiroptera, Infections à coronavirus.
- épidémiologie : Australasie, Infections à coronavirus, Taïwan.
- Animaux, Génome viral, Génotype, Phylogénie, Prévalence, Réaction de polymérisation en chaîne, Séquence nucléotidique.

English descriptors

KwdEn :
- Animals, Australasia (epidemiology), Base Sequence, Chiroptera (virology), Coronavirus (genetics), Coronavirus (isolation & purification), Coronavirus Infections (epidemiology), Coronavirus Infections (veterinary), Coronavirus Infections (virology), Genome, Viral, Genotype, Phylogeny, Polymerase Chain Reaction, Prevalence, RNA, Viral (genetics), Severe Acute Respiratory Syndrome (veterinary), Taiwan (epidemiology).
MESH :
- chemical , genetics : RNA, Viral.
- epidemiology : Australasia, Coronavirus Infections, Taiwan.
- genetics : Coronavirus.
- isolation & purification : Coronavirus.
- veterinary : Coronavirus Infections, Severe Acute Respiratory Syndrome.
- virology : Chiroptera, Coronavirus Infections.
- Animals, Base Sequence, Genome, Viral, Genotype, Phylogeny, Polymerase Chain Reaction, Prevalence.

Abstract

Following the SARS outbreak, extensive surveillance was undertaken globally to detect and identify coronavirus diversity in bats. This study sought to identify the diversity and prevalence of coronaviruses in bats in the Australasian region. We identified four different genotypes of coronavirus, three of which (an alphacoronavirus and two betacoronaviruses) are potentially new species, having less than 90% nucleotide sequence identity with the most closely related described viruses. We did not detect any SARS-like betacoronaviruses, despite targeting rhinolophid bats, the putative natural host taxa. Our findings support the virus-host co-evolution hypothesis, with the detection of Miniopterus bat coronavirus HKU8 (previously reported in Miniopterus species in China, Hong Kong and Bulgaria) in Australian Miniopterus species. Similarly, we detected a novel betacoronavirus genotype from Pteropus alecto which is most closely related to Bat coronavirus HKU9 identified in other pteropodid bats in China, Kenya and the Philippines. We also detected possible cross-species transmission of bat coronaviruses, and the apparent enteric tropism of these viruses. Thus, our findings are consistent with a scenario wherein the current diversity and host specificity of coronaviruses reflects co-evolution with the occasional host shift.

DOI: 10.1007/s10393-016-1116-x
PubMed: 27048154

Affiliations:

Australie, Singapour

Links toward previous steps (curation, corpus...)

to stream PubMed, to step Corpus: 000C72
to stream PubMed, to step Curation: 000C72

Links to Exploration step

pubmed:27048154

Le document en format XML

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<front><div type="abstract" xml:lang="en">Following the SARS outbreak, extensive surveillance was undertaken globally to detect and identify coronavirus diversity in bats. This study sought to identify the diversity and prevalence of coronaviruses in bats in the Australasian region. We identified four different genotypes of coronavirus, three of which (an alphacoronavirus and two betacoronaviruses) are potentially new species, having less than 90% nucleotide sequence identity with the most closely related described viruses. We did not detect any SARS-like betacoronaviruses, despite targeting rhinolophid bats, the putative natural host taxa. Our findings support the virus-host co-evolution hypothesis, with the detection of Miniopterus bat coronavirus HKU8 (previously reported in Miniopterus species in China, Hong Kong and Bulgaria) in Australian Miniopterus species. Similarly, we detected a novel betacoronavirus genotype from Pteropus alecto which is most closely related to Bat coronavirus HKU9 identified in other pteropodid bats in China, Kenya and the Philippines. We also detected possible cross-species transmission of bat coronaviruses, and the apparent enteric tropism of these viruses. Thus, our findings are consistent with a scenario wherein the current diversity and host specificity of coronaviruses reflects co-evolution with the occasional host shift. </div>
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<ArticleId IdType="pii">10.1007/s10393-016-1116-x</ArticleId>
<ArticleId IdType="pmc">PMC7087777</ArticleId>
</ArticleIdList>
<ReferenceList><Reference><Citation>Emerg Infect Dis. 2013 Nov;19(11):1819-23</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24206838</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Emerg Infect Dis. 2007 Oct;13(10):1526-32</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18258002</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2005 Feb;79(4):2001-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15681402</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>N Engl J Med. 2003 May 15;348(20):1967-76</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12690091</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Arch Virol. 2012 Dec;157(12):2349-55</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22833101</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2007 Apr;81(8):4012-20</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17267506</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2010 Nov;84(21):11336-49</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20686038</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Virol. 2006 Aug;80(15):7481-90</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16840328</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2005 Sep 27;102(39):14040-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16169905</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>N Engl J Med. 2012 Nov 8;367 (19):1814-20</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23075143</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Pathog. 2012;8(5):e1002720</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22615575</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Emerg Infect Dis. 2009 Sep;15(9):1377-84</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19788804</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2005 Oct 28;310(5748):676-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16195424</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Ecohealth. 2010 Jun;7(2):204-12</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20645122</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Biol Evol. 2013 Dec;30(12):2725-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24132122</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Gen Virol. 2006 Sep;87(Pt 9):2461-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16894183</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2010 Aug 6;329(5992):676-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20689015</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Gen Virol. 2013 May;94(Pt 5):1028-38</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23364191</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Immunol Methods. 2008 Feb 29;331(1-2):1-12</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18191140</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Emerg Infect Dis. 2007 Sep;13(9):1295-300</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18252098</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nature. 2013 Nov 28;503(7477):535-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24172901</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Vet Med Sci. 2014 Sep;76(9):1267-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24871548</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Clin Infect Dis. 2004 Jan 15;38(2):297-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14699466</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Emerg Infect Dis. 2005 Jul;11(7):1108-11</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16022791</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Emerg Infect Dis. 2008 Apr;14(4):626-31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18400147</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virology. 2007 Oct 25;367(2):428-39</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17617433</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Virology. 2006 Jul 20;351(1):180-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16647731</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Antiviral Res. 2014 Jan;101:45-56</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24184128</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Viruses. 2013 Oct 31;5(11):2679-89</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24184965</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
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Coronavirus Infection and Diversity in Bats in the Australasian Region.

Coronavirus Infection and Diversity in Bats in the Australasian Region.

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