G-quadruplexes in viruses: function and potential therapeutic applications
Identifieur interne : 000895 ( Pmc/Checkpoint ); précédent : 000894; suivant : 000896G-quadruplexes in viruses: function and potential therapeutic applications
Auteurs : Mathieu Métifiot [France] ; Samir Amrane [France] ; Simon Litvak [France] ; Marie-Line Andreola [France]Source :
- Nucleic Acids Research [ 0305-1048 ] ; 2014.
Abstract
G-rich nucleic acids can form non-canonical G-quadruplex structures (G4s) in which four guanines fold in a planar arrangement through Hoogsteen hydrogen bonds. Although many biochemical and structural studies have focused on DNA sequences containing successive, adjacent guanines that spontaneously fold into G4s, evidence for their
Url:
DOI: 10.1093/nar/gku999
PubMed: 25332402
PubMed Central: 4227801
Affiliations:
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PMC:4227801Le document en format XML
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<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">G-quadruplexes in viruses: function and potential therapeutic applications</title>
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<author><name sortKey="Amrane, Samir" sort="Amrane, Samir" uniqKey="Amrane S" first="Samir" last="Amrane">Samir Amrane</name>
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<series><title level="j">Nucleic Acids Research</title>
<idno type="ISSN">0305-1048</idno>
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<front><div type="abstract" xml:lang="en"><p>G-rich nucleic acids can form non-canonical G-quadruplex structures (G4s) in which four guanines fold in a planar arrangement through Hoogsteen hydrogen bonds. Although many biochemical and structural studies have focused on DNA sequences containing successive, adjacent guanines that spontaneously fold into G4s, evidence for their <italic>in vivo</italic>
relevance has recently begun to accumulate. Complete sequencing of the human genome highlighted the presence of ∼300 000 sequences that can potentially form G4s. Likewise, the presence of putative G4-sequences has been reported in various viruses genomes [e.g., Human immunodeficiency virus (HIV-1), Epstein–Barr virus (EBV), papillomavirus (HPV)]. Many studies have focused on telomeric G4s and how their dynamics are regulated to enable telomere synthesis. Moreover, a role for G4s has been proposed in cellular and viral replication, recombination and gene expression control. In parallel, DNA aptamers that form G4s have been described as inhibitors and diagnostic tools to detect viruses [e.g., hepatitis A virus (HAV), EBV, cauliflower mosaic virus (CaMV), severe acute respiratory syndrome virus (SARS), simian virus 40 (SV40)]. Here, special emphasis will be given to the possible role of these structures in a virus life cycle as well as the use of G4-forming oligonucleotides as potential antiviral agents and innovative tools.</p>
</div>
</front>
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</TEI>
<pmc article-type="research-article"><pmc-dir>properties open_access</pmc-dir>
<front><journal-meta><journal-id journal-id-type="nlm-ta">Nucleic Acids Res</journal-id>
<journal-id journal-id-type="iso-abbrev">Nucleic Acids Res</journal-id>
<journal-id journal-id-type="hwp">nar</journal-id>
<journal-id journal-id-type="publisher-id">nar</journal-id>
<journal-title-group><journal-title>Nucleic Acids Research</journal-title>
</journal-title-group>
<issn pub-type="ppub">0305-1048</issn>
<issn pub-type="epub">1362-4962</issn>
<publisher><publisher-name>Oxford University Press</publisher-name>
</publisher>
</journal-meta>
<article-meta><article-id pub-id-type="pmid">25332402</article-id>
<article-id pub-id-type="pmc">4227801</article-id>
<article-id pub-id-type="doi">10.1093/nar/gku999</article-id>
<article-categories><subj-group subj-group-type="heading"><subject>Survey and Summary</subject>
</subj-group>
</article-categories>
<title-group><article-title>G-quadruplexes in viruses: function and potential therapeutic applications</article-title>
</title-group>
<contrib-group><contrib contrib-type="author"><name><surname>Métifiot</surname>
<given-names>Mathieu</given-names>
</name>
<xref ref-type="aff" rid="AFF1"><sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Amrane</surname>
<given-names>Samir</given-names>
</name>
<xref ref-type="aff" rid="AFF2"><sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Litvak</surname>
<given-names>Simon</given-names>
</name>
<xref ref-type="aff" rid="AFF1"><sup>1</sup>
</xref>
<xref ref-type="corresp" rid="COR2">*</xref>
</contrib>
<contrib contrib-type="author"><name><surname>Andreola</surname>
<given-names>Marie-Line</given-names>
</name>
<xref ref-type="aff" rid="AFF1"><sup>1</sup>
</xref>
<xref ref-type="corresp" rid="COR1">*</xref>
</contrib>
<aff id="AFF1"><label>1</label>
CNRS UMR-5234, Université de Bordeaux, 146 Rue Léo Saignat, 33076 Bordeaux, France</aff>
<aff id="AFF2"><label>2</label>
INSERM, U869, IECB, ARNA laboratory, Université de Bordeaux, 2 Rue Robert Escarpit 33600 Pessac, France</aff>
</contrib-group>
<author-notes><corresp id="COR1"><label>*</label>
To whom correspondence should be addressed. Tel: +33 5 57 57 17 40; Fax: +33 5 57 57 17 66; Email: <email>marie-line.andreola@u-bordeaux2.fr</email>
</corresp>
<corresp id="COR2">Correspondence may also be addressed to Simon Litvak. Tel: +33 5 57 57 17 40; Fax: +33 5 57 57 17 66; Email: <email>simon.litvak@reger.u-bordeaux2.fr</email>
</corresp>
</author-notes>
<pub-date pub-type="ppub"><day>10</day>
<month>11</month>
<year>2014</year>
</pub-date>
<pub-date pub-type="epub"><day>20</day>
<month>10</month>
<year>2014</year>
</pub-date>
<pub-date pub-type="pmc-release"><day>20</day>
<month>10</month>
<year>2014</year>
</pub-date>
<pmc-comment> PMC Release delay is 0 months and 0 days and was based on the
. </pmc-comment>
<volume>42</volume>
<issue>20</issue>
<fpage>12352</fpage>
<lpage>12366</lpage>
<history><date date-type="accepted"><day>06</day>
<month>10</month>
<year>2014</year>
</date>
<date date-type="rev-recd"><day>26</day>
<month>9</month>
<year>2014</year>
</date>
<date date-type="received"><day>02</day>
<month>7</month>
<year>2014</year>
</date>
</history>
<permissions><copyright-statement>© The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.</copyright-statement>
<copyright-year>2014</copyright-year>
<license license-type="creative-commons" xlink:href="http://creativecommons.org/licenses/by/4.0/"><license-p>This is an Open Access article distributed under the terms of the Creative Commons Attribution License (<ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/4.0/">http://creativecommons.org/licenses/by/4.0/</ext-link>
), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
</license>
</permissions>
<self-uri xlink:title="pdf" xlink:type="simple" xlink:href="gku999.pdf"></self-uri>
<abstract><p>G-rich nucleic acids can form non-canonical G-quadruplex structures (G4s) in which four guanines fold in a planar arrangement through Hoogsteen hydrogen bonds. Although many biochemical and structural studies have focused on DNA sequences containing successive, adjacent guanines that spontaneously fold into G4s, evidence for their <italic>in vivo</italic>
relevance has recently begun to accumulate. Complete sequencing of the human genome highlighted the presence of ∼300 000 sequences that can potentially form G4s. Likewise, the presence of putative G4-sequences has been reported in various viruses genomes [e.g., Human immunodeficiency virus (HIV-1), Epstein–Barr virus (EBV), papillomavirus (HPV)]. Many studies have focused on telomeric G4s and how their dynamics are regulated to enable telomere synthesis. Moreover, a role for G4s has been proposed in cellular and viral replication, recombination and gene expression control. In parallel, DNA aptamers that form G4s have been described as inhibitors and diagnostic tools to detect viruses [e.g., hepatitis A virus (HAV), EBV, cauliflower mosaic virus (CaMV), severe acute respiratory syndrome virus (SARS), simian virus 40 (SV40)]. Here, special emphasis will be given to the possible role of these structures in a virus life cycle as well as the use of G4-forming oligonucleotides as potential antiviral agents and innovative tools.</p>
</abstract>
<counts><page-count count="15"></page-count>
</counts>
<custom-meta-group><custom-meta><meta-name>cover-date</meta-name>
<meta-value>10 November 2014</meta-value>
</custom-meta>
</custom-meta-group>
</article-meta>
</front>
</pmc>
<affiliations><list><country><li>France</li>
</country>
<region><li>Aquitaine</li>
<li>Nouvelle-Aquitaine</li>
</region>
<settlement><li>Bordeaux</li>
<li>Pessac</li>
</settlement>
<orgName><li>Université de Bordeaux</li>
</orgName>
</list>
<tree><country name="France"><region name="Nouvelle-Aquitaine"><name sortKey="Metifiot, Mathieu" sort="Metifiot, Mathieu" uniqKey="Metifiot M" first="Mathieu" last="Métifiot">Mathieu Métifiot</name>
</region>
<name sortKey="Amrane, Samir" sort="Amrane, Samir" uniqKey="Amrane S" first="Samir" last="Amrane">Samir Amrane</name>
<name sortKey="Andreola, Marie Line" sort="Andreola, Marie Line" uniqKey="Andreola M" first="Marie-Line" last="Andreola">Marie-Line Andreola</name>
<name sortKey="Litvak, Simon" sort="Litvak, Simon" uniqKey="Litvak S" first="Simon" last="Litvak">Simon Litvak</name>
</country>
</tree>
</affiliations>
</record>
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