Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Isolated in Nepal
Identifieur interne : 000318 ( Pmc/Checkpoint ); précédent : 000317; suivant : 000319Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Isolated in Nepal
Auteurs : Ranjit Sah [Népal] ; Alfonso J. Rodriguez-Morales [Colombie] ; Runa Jha [Népal] ; Daniel K. W. Chu [République populaire de Chine] ; Haogao Gu [République populaire de Chine] ; Malik Peiris [République populaire de Chine] ; Anup Bastola [Népal] ; Bibek Kumar Lal [Népal] ; Hemant Chanda Ojha [Népal] ; Ali A. Rabaan [Arabie saoudite] ; Lysien I. Zambrano [Honduras] ; Anthony Costello [Royaume-Uni] ; Kouichi Morita [Japon] ; Basu Dev Pandey [Népal] ; Leo L. M. Poon [République populaire de Chine]Source :
- Microbiology Resource Announcements [ 2576-098X ] ; 2020.
Abstract
A complete genome sequence was obtained for a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain isolated from an oropharyngeal swab specimen of a Nepalese patient with coronavirus disease 2019 (COVID-19), who had returned to Nepal after traveling to Wuhan, China.
Url:
DOI: 10.1128/MRA.00169-20
PubMed: 32165386
PubMed Central: 7067954
Affiliations:
- Arabie saoudite, Colombie, Honduras, Japon, Népal, Royaume-Uni, République populaire de Chine
- Angleterre, Grand Londres
- Londres
- University College de Londres
Links toward previous steps (curation, corpus...)
Links to Exploration step
PMC:7067954Le document en format XML
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Rabaan</name><affiliation wicri:level="1"><nlm:aff id="aff7"><addr-line>Johns Hopkins Aramco Healthcare, Dhahran, Saudi Arabia</addr-line></nlm:aff><country xml:lang="fr">Arabie saoudite</country><wicri:regionArea>Johns Hopkins Aramco Healthcare, Dhahran</wicri:regionArea><wicri:noRegion>Dhahran</wicri:noRegion></affiliation></author><author><name sortKey="Zambrano, Lysien I" sort="Zambrano, Lysien I" uniqKey="Zambrano L" first="Lysien I." last="Zambrano">Lysien I. Zambrano</name><affiliation wicri:level="1"><nlm:aff id="aff8"><addr-line>Departments of Physiological and Morphological Sciences, School of Medical Sciences, Universidad Nacional Autónoma de Honduras (UNAH), Tegucigalpa, Honduras</addr-line></nlm:aff><country xml:lang="fr">Honduras</country><wicri:regionArea>Departments of Physiological and Morphological Sciences, School of Medical Sciences, Universidad Nacional Autónoma de Honduras (UNAH), Tegucigalpa</wicri:regionArea><wicri:noRegion>Tegucigalpa</wicri:noRegion></affiliation></author><author><name sortKey="Costello, Anthony" sort="Costello, Anthony" uniqKey="Costello A" first="Anthony" last="Costello">Anthony Costello</name><affiliation wicri:level="4"><nlm:aff id="aff9"><addr-line>Global Health and Sustainable Development, University College London, London, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Global Health and Sustainable Development, University College London, London</wicri:regionArea><placeName><settlement type="city">Londres</settlement><region type="country">Angleterre</region><region type="région" nuts="1">Grand Londres</region></placeName><orgName type="university">University College de Londres</orgName></affiliation></author><author><name sortKey="Morita, Kouichi" sort="Morita, Kouichi" uniqKey="Morita K" first="Kouichi" last="Morita">Kouichi Morita</name><affiliation wicri:level="1"><nlm:aff id="aff10"><addr-line>Department of Virology, Institute of Tropical Medicine, Nagasaki University, Nagasaki, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Virology, Institute of Tropical Medicine, Nagasaki University, Nagasaki</wicri:regionArea><wicri:noRegion>Nagasaki</wicri:noRegion></affiliation></author><author><name sortKey="Pandey, Basu Dev" sort="Pandey, Basu Dev" uniqKey="Pandey B" first="Basu Dev" last="Pandey">Basu Dev Pandey</name><affiliation wicri:level="1"><nlm:aff id="aff5"><addr-line>Sukraraj Tropical and Infectious Disease Hospital, Kathmandu, Nepal</addr-line></nlm:aff><country xml:lang="fr">Népal</country><wicri:regionArea>Sukraraj Tropical and Infectious Disease Hospital, Kathmandu</wicri:regionArea><wicri:noRegion>Kathmandu</wicri:noRegion></affiliation></author><author><name sortKey="Poon, Leo L M" sort="Poon, Leo L M" uniqKey="Poon L" first="Leo L. M." last="Poon">Leo L. M. Poon</name><affiliation wicri:level="1"><nlm:aff id="aff4"><addr-line>School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region</wicri:regionArea><wicri:noRegion>Hong Kong Special Administrative Region</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">32165386</idno><idno type="pmc">7067954</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7067954</idno><idno type="RBID">PMC:7067954</idno><idno type="doi">10.1128/MRA.00169-20</idno><date when="2020">2020</date><idno type="wicri:Area/Pmc/Corpus">000913</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000913</idno><idno type="wicri:Area/Pmc/Curation">000913</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000913</idno><idno type="wicri:Area/Pmc/Checkpoint">000318</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000318</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Isolated in Nepal</title><author><name sortKey="Sah, Ranjit" sort="Sah, Ranjit" uniqKey="Sah R" first="Ranjit" last="Sah">Ranjit Sah</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>National Public Health Laboratory, Kathmandu, Nepal</addr-line></nlm:aff><country xml:lang="fr">Népal</country><wicri:regionArea>National Public Health Laboratory, Kathmandu</wicri:regionArea><wicri:noRegion>Kathmandu</wicri:noRegion></affiliation></author><author><name sortKey="Rodriguez Morales, Alfonso J" sort="Rodriguez Morales, Alfonso J" uniqKey="Rodriguez Morales A" first="Alfonso J." last="Rodriguez-Morales">Alfonso J. Rodriguez-Morales</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>Public Health and Infection Research Group, Faculty of Health Sciences, Universidad Tecnologica de Pereira, Pereira, Risaralda, Colombia</addr-line></nlm:aff><country xml:lang="fr">Colombie</country><wicri:regionArea>Public Health and Infection Research Group, Faculty of Health Sciences, Universidad Tecnologica de Pereira, Pereira, Risaralda</wicri:regionArea><wicri:noRegion>Risaralda</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>Grupo de Investigación Biomedicina, Faculty of Medicine, Fundación Universitaria Autónoma de las Américas, Pereira, Risaralda, Colombia</addr-line></nlm:aff><country xml:lang="fr">Colombie</country><wicri:regionArea>Grupo de Investigación Biomedicina, Faculty of Medicine, Fundación Universitaria Autónoma de las Américas, Pereira, Risaralda</wicri:regionArea><wicri:noRegion>Risaralda</wicri:noRegion></affiliation></author><author><name sortKey="Jha, Runa" sort="Jha, Runa" uniqKey="Jha R" first="Runa" last="Jha">Runa Jha</name><affiliation wicri:level="1"><nlm:aff id="aff1"><addr-line>National Public Health Laboratory, Kathmandu, Nepal</addr-line></nlm:aff><country xml:lang="fr">Népal</country><wicri:regionArea>National Public Health Laboratory, Kathmandu</wicri:regionArea><wicri:noRegion>Kathmandu</wicri:noRegion></affiliation></author><author><name sortKey="Chu, Daniel K W" sort="Chu, Daniel K W" uniqKey="Chu D" first="Daniel K. W." last="Chu">Daniel K. W. Chu</name><affiliation wicri:level="1"><nlm:aff id="aff4"><addr-line>School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region</wicri:regionArea><wicri:noRegion>Hong Kong Special Administrative Region</wicri:noRegion></affiliation></author><author><name sortKey="Gu, Haogao" sort="Gu, Haogao" uniqKey="Gu H" first="Haogao" last="Gu">Haogao Gu</name><affiliation wicri:level="1"><nlm:aff id="aff4"><addr-line>School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region</wicri:regionArea><wicri:noRegion>Hong Kong Special Administrative Region</wicri:noRegion></affiliation></author><author><name sortKey="Peiris, Malik" sort="Peiris, Malik" uniqKey="Peiris M" first="Malik" last="Peiris">Malik Peiris</name><affiliation wicri:level="1"><nlm:aff id="aff4"><addr-line>School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region</wicri:regionArea><wicri:noRegion>Hong Kong Special Administrative Region</wicri:noRegion></affiliation></author><author><name sortKey="Bastola, Anup" sort="Bastola, Anup" uniqKey="Bastola A" first="Anup" last="Bastola">Anup Bastola</name><affiliation wicri:level="1"><nlm:aff id="aff5"><addr-line>Sukraraj Tropical and Infectious Disease Hospital, Kathmandu, Nepal</addr-line></nlm:aff><country xml:lang="fr">Népal</country><wicri:regionArea>Sukraraj Tropical and Infectious Disease Hospital, Kathmandu</wicri:regionArea><wicri:noRegion>Kathmandu</wicri:noRegion></affiliation></author><author><name sortKey="Lal, Bibek Kumar" sort="Lal, Bibek Kumar" uniqKey="Lal B" first="Bibek Kumar" last="Lal">Bibek Kumar Lal</name><affiliation wicri:level="1"><nlm:aff id="aff6"><addr-line>Epidemiology and Disease Control Division, Government of Nepal, Kathmandu, Nepal</addr-line></nlm:aff><country xml:lang="fr">Népal</country><wicri:regionArea>Epidemiology and Disease Control Division, Government of Nepal, Kathmandu</wicri:regionArea><wicri:noRegion>Kathmandu</wicri:noRegion></affiliation></author><author><name sortKey="Ojha, Hemant Chanda" sort="Ojha, Hemant Chanda" uniqKey="Ojha H" first="Hemant Chanda" last="Ojha">Hemant Chanda Ojha</name><affiliation wicri:level="1"><nlm:aff id="aff6"><addr-line>Epidemiology and Disease Control Division, Government of Nepal, Kathmandu, Nepal</addr-line></nlm:aff><country xml:lang="fr">Népal</country><wicri:regionArea>Epidemiology and Disease Control Division, Government of Nepal, Kathmandu</wicri:regionArea><wicri:noRegion>Kathmandu</wicri:noRegion></affiliation></author><author><name sortKey="Rabaan, Ali A" sort="Rabaan, Ali A" uniqKey="Rabaan A" first="Ali A." last="Rabaan">Ali A. Rabaan</name><affiliation wicri:level="1"><nlm:aff id="aff7"><addr-line>Johns Hopkins Aramco Healthcare, Dhahran, Saudi Arabia</addr-line></nlm:aff><country xml:lang="fr">Arabie saoudite</country><wicri:regionArea>Johns Hopkins Aramco Healthcare, Dhahran</wicri:regionArea><wicri:noRegion>Dhahran</wicri:noRegion></affiliation></author><author><name sortKey="Zambrano, Lysien I" sort="Zambrano, Lysien I" uniqKey="Zambrano L" first="Lysien I." last="Zambrano">Lysien I. Zambrano</name><affiliation wicri:level="1"><nlm:aff id="aff8"><addr-line>Departments of Physiological and Morphological Sciences, School of Medical Sciences, Universidad Nacional Autónoma de Honduras (UNAH), Tegucigalpa, Honduras</addr-line></nlm:aff><country xml:lang="fr">Honduras</country><wicri:regionArea>Departments of Physiological and Morphological Sciences, School of Medical Sciences, Universidad Nacional Autónoma de Honduras (UNAH), Tegucigalpa</wicri:regionArea><wicri:noRegion>Tegucigalpa</wicri:noRegion></affiliation></author><author><name sortKey="Costello, Anthony" sort="Costello, Anthony" uniqKey="Costello A" first="Anthony" last="Costello">Anthony Costello</name><affiliation wicri:level="4"><nlm:aff id="aff9"><addr-line>Global Health and Sustainable Development, University College London, London, United Kingdom</addr-line></nlm:aff><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Global Health and Sustainable Development, University College London, London</wicri:regionArea><placeName><settlement type="city">Londres</settlement><region type="country">Angleterre</region><region type="région" nuts="1">Grand Londres</region></placeName><orgName type="university">University College de Londres</orgName></affiliation></author><author><name sortKey="Morita, Kouichi" sort="Morita, Kouichi" uniqKey="Morita K" first="Kouichi" last="Morita">Kouichi Morita</name><affiliation wicri:level="1"><nlm:aff id="aff10"><addr-line>Department of Virology, Institute of Tropical Medicine, Nagasaki University, Nagasaki, Japan</addr-line></nlm:aff><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Virology, Institute of Tropical Medicine, Nagasaki University, Nagasaki</wicri:regionArea><wicri:noRegion>Nagasaki</wicri:noRegion></affiliation></author><author><name sortKey="Pandey, Basu Dev" sort="Pandey, Basu Dev" uniqKey="Pandey B" first="Basu Dev" last="Pandey">Basu Dev Pandey</name><affiliation wicri:level="1"><nlm:aff id="aff5"><addr-line>Sukraraj Tropical and Infectious Disease Hospital, Kathmandu, Nepal</addr-line></nlm:aff><country xml:lang="fr">Népal</country><wicri:regionArea>Sukraraj Tropical and Infectious Disease Hospital, Kathmandu</wicri:regionArea><wicri:noRegion>Kathmandu</wicri:noRegion></affiliation></author><author><name sortKey="Poon, Leo L M" sort="Poon, Leo L M" uniqKey="Poon L" first="Leo L. M." last="Poon">Leo L. M. Poon</name><affiliation wicri:level="1"><nlm:aff id="aff4"><addr-line>School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region</wicri:regionArea><wicri:noRegion>Hong Kong Special Administrative Region</wicri:noRegion></affiliation></author></analytic><series><title level="j">Microbiology Resource Announcements</title><idno type="eISSN">2576-098X</idno><imprint><date when="2020">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>A complete genome sequence was obtained for a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain isolated from an oropharyngeal swab specimen of a Nepalese patient with coronavirus disease 2019 (COVID-19), who had returned to Nepal after traveling to Wuhan, China.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Huang, C" uniqKey="Huang C">C Huang</name></author><author><name sortKey="Wang, Y" uniqKey="Wang Y">Y Wang</name></author><author><name sortKey="Li, X" uniqKey="Li X">X Li</name></author><author><name sortKey="Ren, L" uniqKey="Ren L">L Ren</name></author><author><name sortKey="Zhao, J" uniqKey="Zhao J">J Zhao</name></author><author><name sortKey="Hu, Y" uniqKey="Hu Y">Y Hu</name></author><author><name sortKey="Zhang, L" uniqKey="Zhang L">L Zhang</name></author><author><name sortKey="Fan, G" uniqKey="Fan G">G Fan</name></author><author><name sortKey="Xu, J" uniqKey="Xu J">J Xu</name></author><author><name sortKey="Gu, X" uniqKey="Gu X">X Gu</name></author><author><name sortKey="Cheng, Z" uniqKey="Cheng Z">Z Cheng</name></author><author><name sortKey="Yu, T" uniqKey="Yu T">T Yu</name></author><author><name sortKey="Xia, J" uniqKey="Xia J">J Xia</name></author><author><name sortKey="Wei, Y" uniqKey="Wei Y">Y Wei</name></author><author><name sortKey="Wu, W" uniqKey="Wu W">W Wu</name></author><author><name sortKey="Xie, X" uniqKey="Xie X">X Xie</name></author><author><name sortKey="Yin, W" uniqKey="Yin W">W Yin</name></author><author><name sortKey="Li, H" uniqKey="Li H">H Li</name></author><author><name sortKey="Liu, M" uniqKey="Liu M">M Liu</name></author><author><name sortKey="Xiao, Y" uniqKey="Xiao Y">Y Xiao</name></author><author><name sortKey="Gao, H" uniqKey="Gao H">H Gao</name></author><author><name sortKey="Guo, L" uniqKey="Guo L">L Guo</name></author><author><name sortKey="Xie, J" uniqKey="Xie J">J Xie</name></author><author><name sortKey="Wang, G" uniqKey="Wang G">G Wang</name></author><author><name sortKey="Jiang, R" uniqKey="Jiang R">R Jiang</name></author><author><name sortKey="Gao, Z" uniqKey="Gao Z">Z Gao</name></author><author><name sortKey="Jin, Q" uniqKey="Jin Q">Q Jin</name></author><author><name sortKey="Wang, J" uniqKey="Wang J">J Wang</name></author><author><name sortKey="Cao, B" uniqKey="Cao B">B Cao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rodriguez Morales, Aj" uniqKey="Rodriguez Morales A">AJ Rodriguez-Morales</name></author><author><name sortKey="Macgregor, K" uniqKey="Macgregor K">K MacGregor</name></author><author><name sortKey="Kanagarajah, S" uniqKey="Kanagarajah S">S Kanagarajah</name></author><author><name sortKey="Patel, D" uniqKey="Patel D">D Patel</name></author><author><name sortKey="Schlagenhauf, P" uniqKey="Schlagenhauf P">P Schlagenhauf</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rodriguez Morales, Aj" uniqKey="Rodriguez Morales A">AJ Rodriguez-Morales</name></author><author><name sortKey="Bonilla Aldana, Dk" uniqKey="Bonilla Aldana D">DK Bonilla-Aldana</name></author><author><name sortKey="Balbin Ramon, Gj" uniqKey="Balbin Ramon G">GJ Balbin-Ramon</name></author><author><name sortKey="Paniz Mondolfi, A" uniqKey="Paniz Mondolfi A">A Paniz-Mondolfi</name></author><author><name sortKey="Rabaan, A" uniqKey="Rabaan A">A Rabaan</name></author><author><name sortKey="Sah, R" uniqKey="Sah R">R Sah</name></author><author><name sortKey="Pagliano, P" uniqKey="Pagliano P">P Pagliano</name></author><author><name sortKey="Esposito, S" uniqKey="Esposito S">S Esposito</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bastola, A" uniqKey="Bastola A">A Bastola</name></author><author><name sortKey="Sah, R" uniqKey="Sah R">R Sah</name></author><author><name sortKey="Rodriguez Morales, Aj" uniqKey="Rodriguez Morales A">AJ Rodriguez-Morales</name></author><author><name sortKey="Lal, Bk" uniqKey="Lal B">BK Lal</name></author><author><name sortKey="Jha, R" uniqKey="Jha R">R Jha</name></author><author><name sortKey="Ojha, Hc" uniqKey="Ojha H">HC Ojha</name></author><author><name sortKey="Shrestha, B" uniqKey="Shrestha B">B Shrestha</name></author><author><name sortKey="Chu, Dkw" uniqKey="Chu D">DKW Chu</name></author><author><name sortKey="Poon, Llm" uniqKey="Poon L">LLM Poon</name></author><author><name sortKey="Costello, A" uniqKey="Costello A">A Costello</name></author><author><name sortKey="Morita, K" uniqKey="Morita K">K Morita</name></author><author><name sortKey="Pandey, Bd" uniqKey="Pandey B">BD Pandey</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chu, Dkw" uniqKey="Chu D">DKW Chu</name></author><author><name sortKey="Pan, Y" uniqKey="Pan Y">Y Pan</name></author><author><name sortKey="Cheng, Sms" uniqKey="Cheng S">SMS Cheng</name></author><author><name sortKey="Hui, Kpy" uniqKey="Hui K">KPY Hui</name></author><author><name sortKey="Krishnan, P" uniqKey="Krishnan P">P Krishnan</name></author><author><name sortKey="Liu, Y" uniqKey="Liu Y">Y 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<front><journal-meta><journal-id journal-id-type="nlm-ta">Microbiol Resour Announc</journal-id><journal-id journal-id-type="iso-abbrev">Microbiol Resour Announc</journal-id><journal-id journal-id-type="hwp">ga</journal-id><journal-id journal-id-type="pmc">mra</journal-id><journal-id journal-id-type="publisher-id">MRA</journal-id><journal-title-group><journal-title>Microbiology Resource Announcements</journal-title></journal-title-group><issn pub-type="epub">2576-098X</issn><publisher><publisher-name>American Society for Microbiology</publisher-name><publisher-loc>1752 N St., N.W., Washington, DC</publisher-loc></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">32165386</article-id><article-id pub-id-type="pmc">7067954</article-id><article-id pub-id-type="publisher-id">MRA00169-20</article-id><article-id pub-id-type="doi">10.1128/MRA.00169-20</article-id><article-categories><subj-group subj-group-type="heading"><subject>Genome Sequences</subject></subj-group></article-categories><title-group><article-title>Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Isolated in Nepal</article-title><alt-title alt-title-type="running-head">Microbiology Resource Announcement</alt-title><alt-title alt-title-type="short-authors">Sah et al.</alt-title></title-group><contrib-group><contrib contrib-type="author" corresp="yes" equal-contrib="yes"><contrib-id contrib-id-type="orcid" authenticated="false">https://orcid.org/0000-0002-2695-8714</contrib-id><name><surname>Sah</surname><given-names>Ranjit</given-names></name><xref ref-type="aff" rid="aff1"><sup>a</sup></xref></contrib><contrib contrib-type="author" equal-contrib="yes"><contrib-id contrib-id-type="orcid" authenticated="false">http://orcid.org/0000-0001-9773-2192</contrib-id><name><surname>Rodriguez-Morales</surname><given-names>Alfonso J.</given-names></name><xref ref-type="aff" rid="aff2"><sup>b</sup></xref><xref ref-type="aff" rid="aff3"><sup>c</sup></xref></contrib><contrib contrib-type="author" equal-contrib="no"><name><surname>Jha</surname><given-names>Runa</given-names></name><xref ref-type="aff" rid="aff1"><sup>a</sup></xref></contrib><contrib contrib-type="author" equal-contrib="no"><name><surname>Chu</surname><given-names>Daniel K. W.</given-names></name><xref ref-type="aff" rid="aff4"><sup>d</sup></xref></contrib><contrib contrib-type="author" equal-contrib="no"><name><surname>Gu</surname><given-names>Haogao</given-names></name><xref ref-type="aff" rid="aff4"><sup>d</sup></xref></contrib><contrib contrib-type="author" equal-contrib="no"><name><surname>Peiris</surname><given-names>Malik</given-names></name><xref ref-type="aff" rid="aff4"><sup>d</sup></xref></contrib><contrib contrib-type="author" equal-contrib="no"><name><surname>Bastola</surname><given-names>Anup</given-names></name><xref ref-type="aff" rid="aff5"><sup>e</sup></xref></contrib><contrib contrib-type="author" equal-contrib="no"><name><surname>Lal</surname><given-names>Bibek Kumar</given-names></name><xref ref-type="aff" rid="aff6"><sup>f</sup></xref></contrib><contrib contrib-type="author" equal-contrib="no"><name><surname>Ojha</surname><given-names>Hemant Chanda</given-names></name><xref ref-type="aff" rid="aff6"><sup>f</sup></xref></contrib><contrib contrib-type="author" equal-contrib="no"><contrib-id contrib-id-type="orcid" authenticated="false">https://orcid.org/0000-0002-6774-9847</contrib-id><name><surname>Rabaan</surname><given-names>Ali A.</given-names></name><xref ref-type="aff" rid="aff7"><sup>g</sup></xref></contrib><contrib contrib-type="author" equal-contrib="no"><contrib-id contrib-id-type="orcid" authenticated="false">http://orcid.org/0000-0001-9002-5807</contrib-id><name><surname>Zambrano</surname><given-names>Lysien I.</given-names></name><xref ref-type="aff" rid="aff8"><sup>h</sup></xref></contrib><contrib contrib-type="author" equal-contrib="no"><name><surname>Costello</surname><given-names>Anthony</given-names></name><xref ref-type="aff" rid="aff9"><sup>i</sup></xref></contrib><contrib contrib-type="author" equal-contrib="no"><name><surname>Morita</surname><given-names>Kouichi</given-names></name><xref ref-type="aff" rid="aff10"><sup>j</sup></xref></contrib><contrib contrib-type="author" equal-contrib="no"><name><surname>Pandey</surname><given-names>Basu Dev</given-names></name><xref ref-type="aff" rid="aff5"><sup>e</sup></xref></contrib><contrib contrib-type="author" equal-contrib="no"><name><surname>Poon</surname><given-names>Leo L. M.</given-names></name><xref ref-type="aff" rid="aff4"><sup>d</sup></xref></contrib><aff id="aff1"><label>a</label><addr-line>National Public Health Laboratory, Kathmandu, Nepal</addr-line></aff><aff id="aff2"><label>b</label><addr-line>Public Health and Infection Research Group, Faculty of Health Sciences, Universidad Tecnologica de Pereira, Pereira, Risaralda, Colombia</addr-line></aff><aff id="aff3"><label>c</label><addr-line>Grupo de Investigación Biomedicina, Faculty of Medicine, Fundación Universitaria Autónoma de las Américas, Pereira, Risaralda, Colombia</addr-line></aff><aff id="aff4"><label>d</label><addr-line>School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region, China</addr-line></aff><aff id="aff5"><label>e</label><addr-line>Sukraraj Tropical and Infectious Disease Hospital, Kathmandu, Nepal</addr-line></aff><aff id="aff6"><label>f</label><addr-line>Epidemiology and Disease Control Division, Government of Nepal, Kathmandu, Nepal</addr-line></aff><aff id="aff7"><label>g</label><addr-line>Johns Hopkins Aramco Healthcare, Dhahran, Saudi Arabia</addr-line></aff><aff id="aff8"><label>h</label><addr-line>Departments of Physiological and Morphological Sciences, School of Medical Sciences, Universidad Nacional Autónoma de Honduras (UNAH), Tegucigalpa, Honduras</addr-line></aff><aff id="aff9"><label>i</label><addr-line>Global Health and Sustainable Development, University College London, London, United Kingdom</addr-line></aff><aff id="aff10"><label>j</label><addr-line>Department of Virology, Institute of Tropical Medicine, Nagasaki University, Nagasaki, Japan</addr-line></aff></contrib-group><contrib-group><contrib contrib-type="editor"><name><surname>Roux</surname><given-names>Simon</given-names></name><role>Editor</role><aff>DOE Joint Genome Institute</aff></contrib></contrib-group><author-notes><corresp id="cor1">Address correspondence to Ranjit Sah, <email>ranjitsah@iom.edu.np</email>.</corresp><fn fn-type="equal"><p>Ranjit Sah and Alfonso J. Rodriguez-Morales contributed equally. Author order was determined by order of increasing seniority.</p></fn><fn fn-type="other"><p><bold>Citation</bold> Sah R, Rodriguez-Morales AJ, Jha R, Chu DKW, Gu H, Peiris M, Bastola A, Lal BK, Ojha HC, Rabaan AA, Zambrano LI, Costello A, Morita K, Pandey BD, Poon LLM. 2020. Complete genome sequence of a 2019 novel coronavirus (SARS-CoV-2) strain isolated in Nepal. Microbiol Resour Announc 9:e00169-20. <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.1128/MRA.00169-20">https://doi.org/10.1128/MRA.00169-20</ext-link>.</p></fn></author-notes><pub-date pub-type="epub"><day>12</day><month>3</month><year>2020</year></pub-date><pub-date pub-type="collection"><month>3</month><year>2020</year></pub-date><volume>9</volume><issue>11</issue><elocation-id>e00169-20</elocation-id><history><date date-type="received"><day>19</day><month>2</month><year>2020</year></date><date date-type="accepted"><day>26</day><month>2</month><year>2020</year></date></history><permissions><copyright-statement>Copyright © 2020 Sah et al.</copyright-statement><copyright-year>2020</copyright-year><copyright-holder>Sah et al.</copyright-holder><license license-type="open-access" xlink:href="https://creativecommons.org/licenses/by/4.0/"><license-p>This is an open-access article distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0 International license</ext-link>.</license-p></license></permissions><self-uri content-type="pdf" xlink:href="MRA.00169-20.pdf"></self-uri><abstract abstract-type="precis"><p>A complete genome sequence was obtained for a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain isolated from an oropharyngeal swab specimen of a Nepalese patient with coronavirus disease 2019 (COVID-19), who had returned to Nepal after traveling to Wuhan, China.</p></abstract><abstract><title>ABSTRACT</title><p>A complete genome sequence was obtained for a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain isolated from an oropharyngeal swab specimen of a Nepalese patient with coronavirus disease 2019 (COVID-19), who had returned to Nepal after traveling to Wuhan, China.</p></abstract><funding-group><award-group id="award1"><funding-source><institution-wrap><institution>Ministry of Science and Technology, Government of Nepal</institution><institution-id>https://doi.org/10.13039/100012813</institution-id></institution-wrap></funding-source><principal-award-recipient><name><surname>Sah</surname><given-names>Ranjit</given-names></name></principal-award-recipient></award-group></funding-group><counts><fig-count count="0"></fig-count><table-count count="1"></table-count><equation-count count="0"></equation-count><ref-count count="7"></ref-count><page-count count="3"></page-count><word-count count="1781"></word-count></counts><custom-meta-group><custom-meta><meta-name>cover-date</meta-name><meta-value>March 2020</meta-value></custom-meta></custom-meta-group></article-meta></front></pmc><affiliations><list><country><li>Arabie saoudite</li><li>Colombie</li><li>Honduras</li><li>Japon</li><li>Népal</li><li>Royaume-Uni</li><li>République populaire de Chine</li></country><region><li>Angleterre</li><li>Grand Londres</li></region><settlement><li>Londres</li></settlement><orgName><li>University College de Londres</li></orgName></list><tree><country name="Népal"><noRegion><name sortKey="Sah, Ranjit" sort="Sah, Ranjit" uniqKey="Sah R" first="Ranjit" last="Sah">Ranjit Sah</name></noRegion><name sortKey="Bastola, Anup" sort="Bastola, Anup" uniqKey="Bastola A" first="Anup" last="Bastola">Anup Bastola</name><name sortKey="Jha, Runa" sort="Jha, Runa" uniqKey="Jha R" first="Runa" last="Jha">Runa Jha</name><name sortKey="Lal, Bibek Kumar" sort="Lal, Bibek Kumar" uniqKey="Lal B" first="Bibek Kumar" last="Lal">Bibek Kumar Lal</name><name sortKey="Ojha, Hemant Chanda" sort="Ojha, Hemant Chanda" uniqKey="Ojha H" first="Hemant Chanda" last="Ojha">Hemant Chanda Ojha</name><name sortKey="Pandey, Basu Dev" sort="Pandey, Basu Dev" uniqKey="Pandey B" first="Basu Dev" last="Pandey">Basu Dev Pandey</name></country><country name="Colombie"><noRegion><name sortKey="Rodriguez Morales, Alfonso J" sort="Rodriguez Morales, Alfonso J" uniqKey="Rodriguez Morales A" first="Alfonso J." last="Rodriguez-Morales">Alfonso J. Rodriguez-Morales</name></noRegion><name sortKey="Rodriguez Morales, Alfonso J" sort="Rodriguez Morales, Alfonso J" uniqKey="Rodriguez Morales A" first="Alfonso J." last="Rodriguez-Morales">Alfonso J. Rodriguez-Morales</name></country><country name="République populaire de Chine"><noRegion><name sortKey="Chu, Daniel K W" sort="Chu, Daniel K W" uniqKey="Chu D" first="Daniel K. W." last="Chu">Daniel K. W. Chu</name></noRegion><name sortKey="Gu, Haogao" sort="Gu, Haogao" uniqKey="Gu H" first="Haogao" last="Gu">Haogao Gu</name><name sortKey="Peiris, Malik" sort="Peiris, Malik" uniqKey="Peiris M" first="Malik" last="Peiris">Malik Peiris</name><name sortKey="Poon, Leo L M" sort="Poon, Leo L M" uniqKey="Poon L" first="Leo L. M." last="Poon">Leo L. M. Poon</name></country><country name="Arabie saoudite"><noRegion><name sortKey="Rabaan, Ali A" sort="Rabaan, Ali A" uniqKey="Rabaan A" first="Ali A." last="Rabaan">Ali A. Rabaan</name></noRegion></country><country name="Honduras"><noRegion><name sortKey="Zambrano, Lysien I" sort="Zambrano, Lysien I" uniqKey="Zambrano L" first="Lysien I." last="Zambrano">Lysien I. Zambrano</name></noRegion></country><country name="Royaume-Uni"><region name="Angleterre"><name sortKey="Costello, Anthony" sort="Costello, Anthony" uniqKey="Costello A" first="Anthony" last="Costello">Anthony Costello</name></region></country><country name="Japon"><noRegion><name sortKey="Morita, Kouichi" sort="Morita, Kouichi" uniqKey="Morita K" first="Kouichi" last="Morita">Kouichi Morita</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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