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RNA aptamer-based sensitive detection of SARS coronavirus nucleocapsid protein

Identifieur interne : 000174 ( PascalFrancis/Corpus ); précédent : 000173; suivant : 000175

RNA aptamer-based sensitive detection of SARS coronavirus nucleocapsid protein

Auteurs : Dae-Gyun Ahn ; Il-Ji Jeon ; JUNG DONG KIM ; Min-Sun Song ; Seung-Ryul Han ; Seong-Wook Lee ; Hyungil Jung ; Jong-Won Oh

Source :

RBID : Pascal:09-0485565

Descripteurs français

English descriptors

Abstract

Severe acute respiratory syndrome coronavirus (SARS-CoV) is the etiological agent of a newly emerged disease SARS. The SARS-CoV nucleocapsid (N) protein is one of the most abundant structural proteins and serves as a diagnostic marker for accurate and sensitive detection of the virus. Using a SELEX (systematic evolution of ligand by exponential enrichment) procedure and recombinant N protein, we selected a high-affinity RNA aptamer capable of binding to N protein with a dissociation constant of 1.65 nM. Electrophoretic mobility shift assays and RNA competition experiments showed that the selected aptamer recognized selectively the C-terminal region of N protein with high specificity. Using a chemiluminescence immunosorbent assay and a nanoarray aptamer chip with the selected aptamer as an antigen-capturing agent, we could sensitively detect N protein at a concentration as low as 2 pg/ml. These aptamer-antibody hybrid immunoassays may be useful for rapid, sensitive detection of SARS-CoV N protein.

Notice en format standard (ISO 2709)

Pour connaître la documentation sur le format Inist Standard.

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A03   1    @0 Analyst : (Lond., 1877, Print)
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A06       @2 9
A08 01  1  ENG  @1 RNA aptamer-based sensitive detection of SARS coronavirus nucleocapsid protein
A11 01  1    @1 AHN (Dae-Gyun)
A11 02  1    @1 JEON (Il-Ji)
A11 03  1    @1 JUNG DONG KIM
A11 04  1    @1 SONG (Min-Sun)
A11 05  1    @1 HAN (Seung-Ryul)
A11 06  1    @1 LEE (Seong-Wook)
A11 07  1    @1 JUNG (Hyungil)
A11 08  1    @1 OH (Jong-Won)
A14 01      @1 Department of Biotechnology, Yonsei University @2 Seoul 120-749 @3 KOR @Z 1 aut. @Z 2 aut. @Z 3 aut. @Z 7 aut. @Z 8 aut.
A14 02      @1 Department of Molecular Biology, Dankook University @2 448-701 @3 KOR @Z 4 aut. @Z 5 aut. @Z 6 aut.
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C01 01    ENG  @0 Severe acute respiratory syndrome coronavirus (SARS-CoV) is the etiological agent of a newly emerged disease SARS. The SARS-CoV nucleocapsid (N) protein is one of the most abundant structural proteins and serves as a diagnostic marker for accurate and sensitive detection of the virus. Using a SELEX (systematic evolution of ligand by exponential enrichment) procedure and recombinant N protein, we selected a high-affinity RNA aptamer capable of binding to N protein with a dissociation constant of 1.65 nM. Electrophoretic mobility shift assays and RNA competition experiments showed that the selected aptamer recognized selectively the C-terminal region of N protein with high specificity. Using a chemiluminescence immunosorbent assay and a nanoarray aptamer chip with the selected aptamer as an antigen-capturing agent, we could sensitively detect N protein at a concentration as low as 2 pg/ml. These aptamer-antibody hybrid immunoassays may be useful for rapid, sensitive detection of SARS-CoV N protein.
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C03 05  X  ENG  @0 Chemical analysis @5 05
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C03 09  X  FRE  @0 Protéine @5 15
C03 09  X  ENG  @0 Protein @5 15
C03 09  X  SPA  @0 Proteína @5 15
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Format Inist (serveur)

NO : PASCAL 09-0485565 INIST
ET : RNA aptamer-based sensitive detection of SARS coronavirus nucleocapsid protein
AU : AHN (Dae-Gyun); JEON (Il-Ji); JUNG DONG KIM; SONG (Min-Sun); HAN (Seung-Ryul); LEE (Seong-Wook); JUNG (Hyungil); OH (Jong-Won)
AF : Department of Biotechnology, Yonsei University/Seoul 120-749/Corée, République de (1 aut., 2 aut., 3 aut., 7 aut., 8 aut.); Department of Molecular Biology, Dankook University/448-701/Corée, République de (4 aut., 5 aut., 6 aut.)
DT : Publication en série; Niveau analytique
SO : Analyst : (London. 1877. Print); ISSN 0003-2654; Coden ANALAO; Royaume-Uni; Da. 2009; Vol. 134; No. 9; Pp. 1896-1901; Bibl. 30 ref.
LA : Anglais
EA : Severe acute respiratory syndrome coronavirus (SARS-CoV) is the etiological agent of a newly emerged disease SARS. The SARS-CoV nucleocapsid (N) protein is one of the most abundant structural proteins and serves as a diagnostic marker for accurate and sensitive detection of the virus. Using a SELEX (systematic evolution of ligand by exponential enrichment) procedure and recombinant N protein, we selected a high-affinity RNA aptamer capable of binding to N protein with a dissociation constant of 1.65 nM. Electrophoretic mobility shift assays and RNA competition experiments showed that the selected aptamer recognized selectively the C-terminal region of N protein with high specificity. Using a chemiluminescence immunosorbent assay and a nanoarray aptamer chip with the selected aptamer as an antigen-capturing agent, we could sensitively detect N protein at a concentration as low as 2 pg/ml. These aptamer-antibody hybrid immunoassays may be useful for rapid, sensitive detection of SARS-CoV N protein.
CC : 001C04F; 001C04G
FD : Marqueur; Enrichissement chimique; Constante dissociation; Mobilité électrophorétique; Analyse chimique; Chimiluminescence; Composé ultratrace; Méthode immunologique; Protéine; Anticorps
ED : Marker; Chemical enrichment; Dissociation constant; Electrophoretic mobility; Chemical analysis; Chemiluminescence; Ultratrace compound; Immunological method; Protein; Antibody
SD : Marcador; Enriquecimiento químico; Constante disociación; Movilidad electroforética; Análisis químico; Quimioluminiscencia; Compuesto ultrahuella; Método inmunológico; Proteína; Anticuerpo
LO : INIST-1036.354000196204190230
ID : 09-0485565

Links to Exploration step

Pascal:09-0485565

Le document en format XML

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<div type="abstract" xml:lang="en">Severe acute respiratory syndrome coronavirus (SARS-CoV) is the etiological agent of a newly emerged disease SARS. The SARS-CoV nucleocapsid (N) protein is one of the most abundant structural proteins and serves as a diagnostic marker for accurate and sensitive detection of the virus. Using a SELEX (systematic evolution of ligand by exponential enrichment) procedure and recombinant N protein, we selected a high-affinity RNA aptamer capable of binding to N protein with a dissociation constant of 1.65 nM. Electrophoretic mobility shift assays and RNA competition experiments showed that the selected aptamer recognized selectively the C-terminal region of N protein with high specificity. Using a chemiluminescence immunosorbent assay and a nanoarray aptamer chip with the selected aptamer as an antigen-capturing agent, we could sensitively detect N protein at a concentration as low as 2 pg/ml. These aptamer-antibody hybrid immunoassays may be useful for rapid, sensitive detection of SARS-CoV N protein.</div>
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<s5>01</s5>
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<s5>02</s5>
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<s5>02</s5>
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<s5>03</s5>
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<s5>03</s5>
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<s5>08</s5>
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<s5>08</s5>
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<s5>08</s5>
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<s5>15</s5>
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<s5>15</s5>
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<s5>15</s5>
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<s5>16</s5>
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<s5>16</s5>
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<s5>16</s5>
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<fN21>
<s1>348</s1>
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<fN44 i1="01">
<s1>OTO</s1>
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<fN82>
<s1>OTO</s1>
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<NO>PASCAL 09-0485565 INIST</NO>
<ET>RNA aptamer-based sensitive detection of SARS coronavirus nucleocapsid protein</ET>
<AU>AHN (Dae-Gyun); JEON (Il-Ji); JUNG DONG KIM; SONG (Min-Sun); HAN (Seung-Ryul); LEE (Seong-Wook); JUNG (Hyungil); OH (Jong-Won)</AU>
<AF>Department of Biotechnology, Yonsei University/Seoul 120-749/Corée, République de (1 aut., 2 aut., 3 aut., 7 aut., 8 aut.); Department of Molecular Biology, Dankook University/448-701/Corée, République de (4 aut., 5 aut., 6 aut.)</AF>
<DT>Publication en série; Niveau analytique</DT>
<SO>Analyst : (London. 1877. Print); ISSN 0003-2654; Coden ANALAO; Royaume-Uni; Da. 2009; Vol. 134; No. 9; Pp. 1896-1901; Bibl. 30 ref.</SO>
<LA>Anglais</LA>
<EA>Severe acute respiratory syndrome coronavirus (SARS-CoV) is the etiological agent of a newly emerged disease SARS. The SARS-CoV nucleocapsid (N) protein is one of the most abundant structural proteins and serves as a diagnostic marker for accurate and sensitive detection of the virus. Using a SELEX (systematic evolution of ligand by exponential enrichment) procedure and recombinant N protein, we selected a high-affinity RNA aptamer capable of binding to N protein with a dissociation constant of 1.65 nM. Electrophoretic mobility shift assays and RNA competition experiments showed that the selected aptamer recognized selectively the C-terminal region of N protein with high specificity. Using a chemiluminescence immunosorbent assay and a nanoarray aptamer chip with the selected aptamer as an antigen-capturing agent, we could sensitively detect N protein at a concentration as low as 2 pg/ml. These aptamer-antibody hybrid immunoassays may be useful for rapid, sensitive detection of SARS-CoV N protein.</EA>
<CC>001C04F; 001C04G</CC>
<FD>Marqueur; Enrichissement chimique; Constante dissociation; Mobilité électrophorétique; Analyse chimique; Chimiluminescence; Composé ultratrace; Méthode immunologique; Protéine; Anticorps</FD>
<ED>Marker; Chemical enrichment; Dissociation constant; Electrophoretic mobility; Chemical analysis; Chemiluminescence; Ultratrace compound; Immunological method; Protein; Antibody</ED>
<SD>Marcador; Enriquecimiento químico; Constante disociación; Movilidad electroforética; Análisis químico; Quimioluminiscencia; Compuesto ultrahuella; Método inmunológico; Proteína; Anticuerpo</SD>
<LO>INIST-1036.354000196204190230</LO>
<ID>09-0485565</ID>
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