Metagenomic Analysis of the Viromes of Three North American Bat Species: Viral Diversity among Different Bat Species That Share a Common Habitat
Identifieur interne : 000140 ( PascalFrancis/Checkpoint ); précédent : 000139; suivant : 000141Metagenomic Analysis of the Viromes of Three North American Bat Species: Viral Diversity among Different Bat Species That Share a Common Habitat
Auteurs : Eric F. Donaldson [États-Unis] ; Aimee N. Haskew [États-Unis] ; J. Edward Gates [États-Unis] ; Jeremy Huynh [États-Unis] ; Clea J. Moore [États-Unis] ; Matthew B. Frieman [États-Unis]Source :
- Journal of virology [ 0022-538X ] ; 2010.
Descripteurs français
- Pascal (Inist)
English descriptors
- KwdEn :
Abstract
Effective prediction of future viral zoonoses requires an in-depth understanding of the heterologous viral population in key animal species that will likely serve as reservoir hosts or intermediates during the next viral epidemic. The importance of bats as natural hosts for several important viral zoonoses, including Ebola, Marburg, Nipah, Hendra, and rabies viruses and severe acute respiratory syndrome-coronavirus (SARS-CoV), has been established; however, the large viral population diversity (virome) of bats has been partially determined for only a few of the ˜1,200 bat species. To assess the virome of North American bats, we collected fecal, oral, urine, and tissue samples from individual bats captured at an abandoned railroad tunnel in Maryland that is cohabitated by 7 to 10 different bat species. Here, we present preliminary characterization of the virome of three common North American bat species, including big brown bats (Eptesicus fuscus), tricolored bats (Perimyotis subflavus), and little brown myotis (Myotis lucifugus). In samples derived from these bats, we identified viral sequences that were similar to at least three novel group 1 CoVs, large numbers of insect and plant virus sequences, and nearly full-length genomic sequences of two novel bacteriophages. These observations suggest that bats encounter and disseminate a large assortment of viruses capable of infecting many different animals, insects, and plants in nature.
Affiliations:
Links toward previous steps (curation, corpus...)
Links to Exploration step
Pascal:11-0034768Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en" level="a">Metagenomic Analysis of the Viromes of Three North American Bat Species: Viral Diversity among Different Bat Species That Share a Common Habitat</title><author><name sortKey="Donaldson, Eric F" sort="Donaldson, Eric F" uniqKey="Donaldson E" first="Eric F." last="Donaldson">Eric F. Donaldson</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department of Epidemiology, University of North Carolina</s1><s2>Chapel Hill, North Carolina 27599</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>4 aut.</sZ></inist:fA14><country>États-Unis</country><wicri:noRegion>Chapel Hill, North Carolina 27599</wicri:noRegion></affiliation></author><author><name sortKey="Haskew, Aimee N" sort="Haskew, Aimee N" uniqKey="Haskew A" first="Aimee N." last="Haskew">Aimee N. Haskew</name><affiliation wicri:level="1"><inist:fA14 i1="02"><s1>University of Maryland Center for Environmental Science, Appalachian Laboratory</s1><s2>Frostburg, Maryland 21532</s2><s3>USA</s3><sZ>2 aut.</sZ><sZ>3 aut.</sZ></inist:fA14><country>États-Unis</country><wicri:noRegion>Frostburg, Maryland 21532</wicri:noRegion></affiliation></author><author><name sortKey="Gates, J Edward" sort="Gates, J Edward" uniqKey="Gates J" first="J. Edward" last="Gates">J. Edward Gates</name><affiliation wicri:level="1"><inist:fA14 i1="02"><s1>University of Maryland Center for Environmental Science, Appalachian Laboratory</s1><s2>Frostburg, Maryland 21532</s2><s3>USA</s3><sZ>2 aut.</sZ><sZ>3 aut.</sZ></inist:fA14><country>États-Unis</country><wicri:noRegion>Frostburg, Maryland 21532</wicri:noRegion></affiliation></author><author><name sortKey="Huynh, Jeremy" sort="Huynh, Jeremy" uniqKey="Huynh J" first="Jeremy" last="Huynh">Jeremy Huynh</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department of Epidemiology, University of North Carolina</s1><s2>Chapel Hill, North Carolina 27599</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>4 aut.</sZ></inist:fA14><country>États-Unis</country><wicri:noRegion>Chapel Hill, North Carolina 27599</wicri:noRegion></affiliation></author><author><name sortKey="Moore, Clea J" sort="Moore, Clea J" uniqKey="Moore C" first="Clea J." last="Moore">Clea J. Moore</name><affiliation wicri:level="1"><inist:fA14 i1="03"><s1>Department of Biological Sciences, Oakwood University</s1><s2>Huntsville, Alabama 35896</s2><s3>USA</s3><sZ>5 aut.</sZ></inist:fA14><country>États-Unis</country><wicri:noRegion>Huntsville, Alabama 35896</wicri:noRegion></affiliation></author><author><name sortKey="Frieman, Matthew B" sort="Frieman, Matthew B" uniqKey="Frieman M" first="Matthew B." last="Frieman">Matthew B. Frieman</name><affiliation wicri:level="1"><inist:fA14 i1="04"><s1>Department of Microbiology and Immunology, University of Maryland at Baltimore</s1><s2>Baltimore, Maryland 21201</s2><s3>USA</s3><sZ>6 aut.</sZ></inist:fA14><country>États-Unis</country><wicri:noRegion>Baltimore, Maryland 21201</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">INIST</idno><idno type="inist">11-0034768</idno><date when="2010">2010</date><idno type="stanalyst">PASCAL 11-0034768 INIST</idno><idno type="RBID">Pascal:11-0034768</idno><idno type="wicri:Area/PascalFrancis/Corpus">000122</idno><idno type="wicri:Area/PascalFrancis/Curation">000866</idno><idno type="wicri:Area/PascalFrancis/Checkpoint">000140</idno><idno type="wicri:explorRef" wicri:stream="PascalFrancis" wicri:step="Checkpoint">000140</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a">Metagenomic Analysis of the Viromes of Three North American Bat Species: Viral Diversity among Different Bat Species That Share a Common Habitat</title><author><name sortKey="Donaldson, Eric F" sort="Donaldson, Eric F" uniqKey="Donaldson E" first="Eric F." last="Donaldson">Eric F. Donaldson</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department of Epidemiology, University of North Carolina</s1><s2>Chapel Hill, North Carolina 27599</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>4 aut.</sZ></inist:fA14><country>États-Unis</country><wicri:noRegion>Chapel Hill, North Carolina 27599</wicri:noRegion></affiliation></author><author><name sortKey="Haskew, Aimee N" sort="Haskew, Aimee N" uniqKey="Haskew A" first="Aimee N." last="Haskew">Aimee N. Haskew</name><affiliation wicri:level="1"><inist:fA14 i1="02"><s1>University of Maryland Center for Environmental Science, Appalachian Laboratory</s1><s2>Frostburg, Maryland 21532</s2><s3>USA</s3><sZ>2 aut.</sZ><sZ>3 aut.</sZ></inist:fA14><country>États-Unis</country><wicri:noRegion>Frostburg, Maryland 21532</wicri:noRegion></affiliation></author><author><name sortKey="Gates, J Edward" sort="Gates, J Edward" uniqKey="Gates J" first="J. Edward" last="Gates">J. Edward Gates</name><affiliation wicri:level="1"><inist:fA14 i1="02"><s1>University of Maryland Center for Environmental Science, Appalachian Laboratory</s1><s2>Frostburg, Maryland 21532</s2><s3>USA</s3><sZ>2 aut.</sZ><sZ>3 aut.</sZ></inist:fA14><country>États-Unis</country><wicri:noRegion>Frostburg, Maryland 21532</wicri:noRegion></affiliation></author><author><name sortKey="Huynh, Jeremy" sort="Huynh, Jeremy" uniqKey="Huynh J" first="Jeremy" last="Huynh">Jeremy Huynh</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department of Epidemiology, University of North Carolina</s1><s2>Chapel Hill, North Carolina 27599</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>4 aut.</sZ></inist:fA14><country>États-Unis</country><wicri:noRegion>Chapel Hill, North Carolina 27599</wicri:noRegion></affiliation></author><author><name sortKey="Moore, Clea J" sort="Moore, Clea J" uniqKey="Moore C" first="Clea J." last="Moore">Clea J. Moore</name><affiliation wicri:level="1"><inist:fA14 i1="03"><s1>Department of Biological Sciences, Oakwood University</s1><s2>Huntsville, Alabama 35896</s2><s3>USA</s3><sZ>5 aut.</sZ></inist:fA14><country>États-Unis</country><wicri:noRegion>Huntsville, Alabama 35896</wicri:noRegion></affiliation></author><author><name sortKey="Frieman, Matthew B" sort="Frieman, Matthew B" uniqKey="Frieman M" first="Matthew B." last="Frieman">Matthew B. Frieman</name><affiliation wicri:level="1"><inist:fA14 i1="04"><s1>Department of Microbiology and Immunology, University of Maryland at Baltimore</s1><s2>Baltimore, Maryland 21201</s2><s3>USA</s3><sZ>6 aut.</sZ></inist:fA14><country>États-Unis</country><wicri:noRegion>Baltimore, Maryland 21201</wicri:noRegion></affiliation></author></analytic><series><title level="j" type="main">Journal of virology</title><title level="j" type="abbreviated">J. virol.</title><idno type="ISSN">0022-538X</idno><imprint><date when="2010">2010</date></imprint></series></biblStruct></sourceDesc><seriesStmt><title level="j" type="main">Journal of virology</title><title level="j" type="abbreviated">J. virol.</title><idno type="ISSN">0022-538X</idno></seriesStmt></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Metagenome</term><term>Species diversity</term></keywords><keywords scheme="Pascal" xml:lang="fr"><term>Diversité espèces</term><term>Métagénome</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Effective prediction of future viral zoonoses requires an in-depth understanding of the heterologous viral population in key animal species that will likely serve as reservoir hosts or intermediates during the next viral epidemic. The importance of bats as natural hosts for several important viral zoonoses, including Ebola, Marburg, Nipah, Hendra, and rabies viruses and severe acute respiratory syndrome-coronavirus (SARS-CoV), has been established; however, the large viral population diversity (virome) of bats has been partially determined for only a few of the ˜1,200 bat species. To assess the virome of North American bats, we collected fecal, oral, urine, and tissue samples from individual bats captured at an abandoned railroad tunnel in Maryland that is cohabitated by 7 to 10 different bat species. Here, we present preliminary characterization of the virome of three common North American bat species, including big brown bats (Eptesicus fuscus), tricolored bats (Perimyotis subflavus), and little brown myotis (Myotis lucifugus). In samples derived from these bats, we identified viral sequences that were similar to at least three novel group 1 CoVs, large numbers of insect and plant virus sequences, and nearly full-length genomic sequences of two novel bacteriophages. These observations suggest that bats encounter and disseminate a large assortment of viruses capable of infecting many different animals, insects, and plants in nature.</div></front></TEI><inist><standard h6="B"><pA><fA01 i1="01" i2="1"><s0>0022-538X</s0></fA01><fA03 i2="1"><s0>J. virol.</s0></fA03><fA05><s2>84</s2></fA05><fA06><s2>24</s2></fA06><fA08 i1="01" i2="1" l="ENG"><s1>Metagenomic Analysis of the Viromes of Three North American Bat Species: Viral Diversity among Different Bat Species That Share a Common Habitat</s1></fA08><fA11 i1="01" i2="1"><s1>DONALDSON (Eric F.)</s1></fA11><fA11 i1="02" i2="1"><s1>HASKEW (Aimee N.)</s1></fA11><fA11 i1="03" i2="1"><s1>GATES (J. Edward)</s1></fA11><fA11 i1="04" i2="1"><s1>HUYNH (Jeremy)</s1></fA11><fA11 i1="05" i2="1"><s1>MOORE (Clea J.)</s1></fA11><fA11 i1="06" i2="1"><s1>FRIEMAN (Matthew B.)</s1></fA11><fA14 i1="01"><s1>Department of Epidemiology, University of North Carolina</s1><s2>Chapel Hill, North Carolina 27599</s2><s3>USA</s3><sZ>1 aut.</sZ><sZ>4 aut.</sZ></fA14><fA14 i1="02"><s1>University of Maryland Center for Environmental Science, Appalachian Laboratory</s1><s2>Frostburg, Maryland 21532</s2><s3>USA</s3><sZ>2 aut.</sZ><sZ>3 aut.</sZ></fA14><fA14 i1="03"><s1>Department of Biological Sciences, Oakwood University</s1><s2>Huntsville, Alabama 35896</s2><s3>USA</s3><sZ>5 aut.</sZ></fA14><fA14 i1="04"><s1>Department of Microbiology and Immunology, University of Maryland at Baltimore</s1><s2>Baltimore, Maryland 21201</s2><s3>USA</s3><sZ>6 aut.</sZ></fA14><fA20><s1>13004-13018</s1></fA20><fA21><s1>2010</s1></fA21><fA23 i1="01"><s0>ENG</s0></fA23><fA43 i1="01"><s1>INIST</s1><s2>13592</s2><s5>354000193473440520</s5></fA43><fA44><s0>0000</s0><s1>© 2011 INIST-CNRS. All rights reserved.</s1></fA44><fA45><s0>96 ref.</s0></fA45><fA47 i1="01" i2="1"><s0>11-0034768</s0></fA47><fA60><s1>P</s1></fA60><fA61><s0>A</s0></fA61><fA64 i1="01" i2="1"><s0>Journal of virology</s0></fA64><fA66 i1="01"><s0>USA</s0></fA66><fC01 i1="01" l="ENG"><s0>Effective prediction of future viral zoonoses requires an in-depth understanding of the heterologous viral population in key animal species that will likely serve as reservoir hosts or intermediates during the next viral epidemic. The importance of bats as natural hosts for several important viral zoonoses, including Ebola, Marburg, Nipah, Hendra, and rabies viruses and severe acute respiratory syndrome-coronavirus (SARS-CoV), has been established; however, the large viral population diversity (virome) of bats has been partially determined for only a few of the ˜1,200 bat species. To assess the virome of North American bats, we collected fecal, oral, urine, and tissue samples from individual bats captured at an abandoned railroad tunnel in Maryland that is cohabitated by 7 to 10 different bat species. Here, we present preliminary characterization of the virome of three common North American bat species, including big brown bats (Eptesicus fuscus), tricolored bats (Perimyotis subflavus), and little brown myotis (Myotis lucifugus). In samples derived from these bats, we identified viral sequences that were similar to at least three novel group 1 CoVs, large numbers of insect and plant virus sequences, and nearly full-length genomic sequences of two novel bacteriophages. These observations suggest that bats encounter and disseminate a large assortment of viruses capable of infecting many different animals, insects, and plants in nature.</s0></fC01><fC02 i1="01" i2="X"><s0>002A05C10</s0></fC02><fC03 i1="01" i2="X" l="FRE"><s0>Diversité espèces</s0><s5>05</s5></fC03><fC03 i1="01" i2="X" l="ENG"><s0>Species diversity</s0><s5>05</s5></fC03><fC03 i1="01" i2="X" l="SPA"><s0>Diversidad especies</s0><s5>05</s5></fC03><fC03 i1="02" i2="X" l="FRE"><s0>Métagénome</s0><s4>CD</s4><s5>96</s5></fC03><fC03 i1="02" i2="X" l="ENG"><s0>Metagenome</s0><s4>CD</s4><s5>96</s5></fC03><fN21><s1>024</s1></fN21><fN44 i1="01"><s1>OTO</s1></fN44><fN82><s1>OTO</s1></fN82></pA></standard></inist><affiliations><list><country><li>États-Unis</li></country></list><tree><country name="États-Unis"><noRegion><name sortKey="Donaldson, Eric F" sort="Donaldson, Eric F" uniqKey="Donaldson E" first="Eric F." last="Donaldson">Eric F. Donaldson</name></noRegion><name sortKey="Frieman, Matthew B" sort="Frieman, Matthew B" uniqKey="Frieman M" first="Matthew B." last="Frieman">Matthew B. Frieman</name><name sortKey="Gates, J Edward" sort="Gates, J Edward" uniqKey="Gates J" first="J. Edward" last="Gates">J. Edward Gates</name><name sortKey="Haskew, Aimee N" sort="Haskew, Aimee N" uniqKey="Haskew A" first="Aimee N." last="Haskew">Aimee N. Haskew</name><name sortKey="Huynh, Jeremy" sort="Huynh, Jeremy" uniqKey="Huynh J" first="Jeremy" last="Huynh">Jeremy Huynh</name><name sortKey="Moore, Clea J" sort="Moore, Clea J" uniqKey="Moore C" first="Clea J." last="Moore">Clea J. Moore</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/PascalFrancis/Checkpoint
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000140 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/PascalFrancis/Checkpoint/biblio.hfd -nk 000140 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Sante
|area= SrasV1
|flux= PascalFrancis
|étape= Checkpoint
|type= RBID
|clé= Pascal:11-0034768
|texte= Metagenomic Analysis of the Viromes of Three North American Bat Species: Viral Diversity among Different Bat Species That Share a Common Habitat
}}
| This area was generated with Dilib version V0.6.33. |  |