SrasV1, Ncbi, Merge, bibRecord, 002E97

Circulation of Alphacoronavirus, Betacoronavirus and Paramyxovirus in Hipposideros bat species in Zimbabwe.

Identifieur interne : 002E97 ( Ncbi/Merge ); précédent : 002E96; suivant : 002E98

Circulation of Alphacoronavirus, Betacoronavirus and Paramyxovirus in Hipposideros bat species in Zimbabwe.

Auteurs : Mathieu Bourgarel [France] ; Davies M. Pfukenyi [Zimbabwe] ; Vanina Boué [France] ; Loïc Talignani [France] ; Ngoni Chiweshe [Zimbabwe] ; Fodé Diop [France] ; Alexandre Caron [Mozambique] ; Gift Matope [Zimbabwe] ; Dorothée Missé [France] ; Florian Liégeois [France]

Source :

Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases [ 1567-7257 ] ; 2018.

RBID : pubmed:29331670

Descripteurs français

KwdFr :
- Animaux, Chiroptera (virologie), Génome viral, Infections à Paramyxoviridae (médecine vétérinaire), Infections à coronavirus (médecine vétérinaire), Maladies transmissibles émergentes (médecine vétérinaire), Paramyxoviridae (), Paramyxoviridae (génétique), Phylogénie, Variation génétique, Zimbabwe, Évolution moléculaire.
MESH :
- génétique : Paramyxoviridae.
- médecine vétérinaire : Infections à Paramyxoviridae, Infections à coronavirus, Maladies transmissibles émergentes.
- virologie : Chiroptera.
- Animaux, Génome viral, Paramyxoviridae, Phylogénie, Variation génétique, Zimbabwe, Évolution moléculaire.
Wicri :
- geographic : Zimbabwe.

English descriptors

KwdEn :
- Alphacoronavirus (classification), Alphacoronavirus (genetics), Animals, Betacoronavirus (classification), Betacoronavirus (genetics), Chiroptera (virology), Communicable Diseases, Emerging (veterinary), Coronavirus Infections (veterinary), Evolution, Molecular, Genetic Variation, Genome, Viral, Paramyxoviridae (classification), Paramyxoviridae (genetics), Paramyxoviridae Infections (veterinary), Phylogeny, Zimbabwe.
MESH :
- geographic : Zimbabwe.
- classification : Alphacoronavirus, Betacoronavirus, Paramyxoviridae.
- genetics : Alphacoronavirus, Betacoronavirus, Paramyxoviridae.
- veterinary : Communicable Diseases, Emerging, Coronavirus Infections, Paramyxoviridae Infections.
- virology : Chiroptera.
- Animals, Evolution, Molecular, Genetic Variation, Genome, Viral, Phylogeny.

Abstract

Bats carry a great diversity of zoonotic viruses with a high-impact on human health and livestock. Since the emergence of new coronaviruses and paramyxoviruses in humans (e.g. Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV) and Nipah virus), numerous studies clearly established that bats can maintain some of these viruses. Improving our understanding on the role of bats in the epidemiology of the pathogens they harbour is necessary to prevent cross-species spill over along the wild/domestic/human gradient. In this study, we screened bat faecal samples for the presence of Coronavirus and Paramyxovirus in two caves frequently visited by local people to collect manure and/or to hunt bats in Zimbabwe. We amplified partial RNA-dependent RNA polymerase genes of Alpha and Betacoronavirus together with the partial polymerase gene of Paramyxovirus. Identified coronaviruses were related to pathogenic human strains and the paramyxovirus belonged to the recently described Jeilongvirus genus. Our results highlighted the importance of monitoring virus circulation in wildlife, especially bats, in the context of intense human-wildlife interfaces in order to strengthen prevention measures among local populations and to implement sentinel surveillance in sites with high zoonotic diseases transmission potential.

DOI: 10.1016/j.meegid.2018.01.007
PubMed: 29331670

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pubmed:29331670

Le document en format XML

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<term>Animals</term>
<term>Betacoronavirus (classification)</term>
<term>Betacoronavirus (genetics)</term>
<term>Chiroptera (virology)</term>
<term>Communicable Diseases, Emerging (veterinary)</term>
<term>Coronavirus Infections (veterinary)</term>
<term>Evolution, Molecular</term>
<term>Genetic Variation</term>
<term>Genome, Viral</term>
<term>Paramyxoviridae (classification)</term>
<term>Paramyxoviridae (genetics)</term>
<term>Paramyxoviridae Infections (veterinary)</term>
<term>Phylogeny</term>
<term>Zimbabwe</term>
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<keywords scheme="KwdFr" xml:lang="fr"><term>Animaux</term>
<term>Chiroptera (virologie)</term>
<term>Génome viral</term>
<term>Infections à Paramyxoviridae (médecine vétérinaire)</term>
<term>Infections à coronavirus (médecine vétérinaire)</term>
<term>Maladies transmissibles émergentes (médecine vétérinaire)</term>
<term>Paramyxoviridae ()</term>
<term>Paramyxoviridae (génétique)</term>
<term>Phylogénie</term>
<term>Variation génétique</term>
<term>Zimbabwe</term>
<term>Évolution moléculaire</term>
</keywords>
<keywords scheme="MESH" type="geographic" xml:lang="en"><term>Zimbabwe</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Alphacoronavirus</term>
<term>Betacoronavirus</term>
<term>Paramyxoviridae</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Alphacoronavirus</term>
<term>Betacoronavirus</term>
<term>Paramyxoviridae</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Paramyxoviridae</term>
</keywords>
<keywords scheme="MESH" qualifier="médecine vétérinaire" xml:lang="fr"><term>Infections à Paramyxoviridae</term>
<term>Infections à coronavirus</term>
<term>Maladies transmissibles émergentes</term>
</keywords>
<keywords scheme="MESH" qualifier="veterinary" xml:lang="en"><term>Communicable Diseases, Emerging</term>
<term>Coronavirus Infections</term>
<term>Paramyxoviridae Infections</term>
</keywords>
<keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Chiroptera</term>
</keywords>
<keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Chiroptera</term>
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<keywords scheme="MESH" xml:lang="en"><term>Animals</term>
<term>Evolution, Molecular</term>
<term>Genetic Variation</term>
<term>Genome, Viral</term>
<term>Phylogeny</term>
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<term>Génome viral</term>
<term>Paramyxoviridae</term>
<term>Phylogénie</term>
<term>Variation génétique</term>
<term>Zimbabwe</term>
<term>Évolution moléculaire</term>
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<front><div type="abstract" xml:lang="en">Bats carry a great diversity of zoonotic viruses with a high-impact on human health and livestock. Since the emergence of new coronaviruses and paramyxoviruses in humans (e.g. Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV) and Nipah virus), numerous studies clearly established that bats can maintain some of these viruses. Improving our understanding on the role of bats in the epidemiology of the pathogens they harbour is necessary to prevent cross-species spill over along the wild/domestic/human gradient. In this study, we screened bat faecal samples for the presence of Coronavirus and Paramyxovirus in two caves frequently visited by local people to collect manure and/or to hunt bats in Zimbabwe. We amplified partial RNA-dependent RNA polymerase genes of Alpha and Betacoronavirus together with the partial polymerase gene of Paramyxovirus. Identified coronaviruses were related to pathogenic human strains and the paramyxovirus belonged to the recently described Jeilongvirus genus. Our results highlighted the importance of monitoring virus circulation in wildlife, especially bats, in the context of intense human-wildlife interfaces in order to strengthen prevention measures among local populations and to implement sentinel surveillance in sites with high zoonotic diseases transmission potential.</div>
</front>
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<ELocationID EIdType="doi" ValidYN="Y">10.1016/j.meegid.2018.01.007</ELocationID>
<Abstract><AbstractText>Bats carry a great diversity of zoonotic viruses with a high-impact on human health and livestock. Since the emergence of new coronaviruses and paramyxoviruses in humans (e.g. Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV) and Nipah virus), numerous studies clearly established that bats can maintain some of these viruses. Improving our understanding on the role of bats in the epidemiology of the pathogens they harbour is necessary to prevent cross-species spill over along the wild/domestic/human gradient. In this study, we screened bat faecal samples for the presence of Coronavirus and Paramyxovirus in two caves frequently visited by local people to collect manure and/or to hunt bats in Zimbabwe. We amplified partial RNA-dependent RNA polymerase genes of Alpha and Betacoronavirus together with the partial polymerase gene of Paramyxovirus. Identified coronaviruses were related to pathogenic human strains and the paramyxovirus belonged to the recently described Jeilongvirus genus. Our results highlighted the importance of monitoring virus circulation in wildlife, especially bats, in the context of intense human-wildlife interfaces in order to strengthen prevention measures among local populations and to implement sentinel surveillance in sites with high zoonotic diseases transmission potential.</AbstractText>
<CopyrightInformation>Copyright © 2018 Elsevier B.V. All rights reserved.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Bourgarel</LastName>
<ForeName>Mathieu</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>CIRAD, UMR ASTRE, RP-PCP, Harare, Zimbabwe; ASTRE, Univ. Montpellier, CIRAD, INRA, Montpellier, France. Electronic address: mathieu.bourgarel@cirad.com.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Pfukenyi</LastName>
<ForeName>Davies M</ForeName>
<Initials>DM</Initials>
<AffiliationInfo><Affiliation>Faculty of Veterinary Science, University of Zimbabwe, P.O. Box MP167, Mt. Pleasant Harare, Zimbabwe.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Boué</LastName>
<ForeName>Vanina</ForeName>
<Initials>V</Initials>
<AffiliationInfo><Affiliation>MIVEGEC, IRD, CNRS, Univ. Montpellier, Montpellier, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Talignani</LastName>
<ForeName>Loïc</ForeName>
<Initials>L</Initials>
<AffiliationInfo><Affiliation>MIVEGEC, IRD, CNRS, Univ. Montpellier, Montpellier, France. Electronic address: loic.talignani@ird.fr.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Chiweshe</LastName>
<ForeName>Ngoni</ForeName>
<Initials>N</Initials>
<AffiliationInfo><Affiliation>CIRAD, UMR ASTRE, RP-PCP, Harare, Zimbabwe.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Diop</LastName>
<ForeName>Fodé</ForeName>
<Initials>F</Initials>
<AffiliationInfo><Affiliation>MIVEGEC, IRD, CNRS, Univ. Montpellier, Montpellier, France. Electronic address: fode.diop@ird.fr.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Caron</LastName>
<ForeName>Alexandre</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>CIRAD, UMR ASTRE, RP-PCP, Harare, Zimbabwe; CIRAD, UMR ASTRE, RP-PCP, Maputo, Mozambique; Faculdade de Veterinária, Universidade Eduardo Mondlane, Maputo, Mozambique. Electronic address: alexandre.caron@cirad.fr.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Matope</LastName>
<ForeName>Gift</ForeName>
<Initials>G</Initials>
<AffiliationInfo><Affiliation>Faculty of Veterinary Science, University of Zimbabwe, P.O. Box MP167, Mt. Pleasant Harare, Zimbabwe.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Missé</LastName>
<ForeName>Dorothée</ForeName>
<Initials>D</Initials>
<AffiliationInfo><Affiliation>MIVEGEC, IRD, CNRS, Univ. Montpellier, Montpellier, France. Electronic address: dorothee.misse@ird.fr.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Liégeois</LastName>
<ForeName>Florian</ForeName>
<Initials>F</Initials>
<AffiliationInfo><Affiliation>MIVEGEC, IRD, CNRS, Univ. Montpellier, Montpellier, France. Electronic address: florian.liegeois@ird.fr.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2018</Year>
<Month>01</Month>
<Day>10</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>Netherlands</Country>
<MedlineTA>Infect Genet Evol</MedlineTA>
<NlmUniqueID>101084138</NlmUniqueID>
<ISSNLinking>1567-1348</ISSNLinking>
</MedlineJournalInfo>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D000073638" MajorTopicYN="N">Alphacoronavirus</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D000073640" MajorTopicYN="N">Betacoronavirus</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D002685" MajorTopicYN="N">Chiroptera</DescriptorName>
<QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D021821" MajorTopicYN="N">Communicable Diseases, Emerging</DescriptorName>
<QualifierName UI="Q000662" MajorTopicYN="N">veterinary</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018352" MajorTopicYN="N">Coronavirus Infections</DescriptorName>
<QualifierName UI="Q000662" MajorTopicYN="Y">veterinary</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D019143" MajorTopicYN="N">Evolution, Molecular</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D014644" MajorTopicYN="N">Genetic Variation</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D016679" MajorTopicYN="N">Genome, Viral</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010252" MajorTopicYN="N">Paramyxoviridae</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018184" MajorTopicYN="N">Paramyxoviridae Infections</DescriptorName>
<QualifierName UI="Q000662" MajorTopicYN="Y">veterinary</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D015030" MajorTopicYN="N" Type="Geographic">Zimbabwe</DescriptorName>
</MeshHeading>
</MeshHeadingList>
<KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">Bat</Keyword>
<Keyword MajorTopicYN="Y">Coronavirus</Keyword>
<Keyword MajorTopicYN="Y">Emerging infectious diseases</Keyword>
<Keyword MajorTopicYN="Y">Paramyxovirus</Keyword>
<Keyword MajorTopicYN="Y">Phylogeny</Keyword>
<Keyword MajorTopicYN="Y">Zimbabwe</Keyword>
</KeywordList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="received"><Year>2017</Year>
<Month>09</Month>
<Day>28</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="revised"><Year>2018</Year>
<Month>01</Month>
<Day>08</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted"><Year>2018</Year>
<Month>01</Month>
<Day>09</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed"><Year>2018</Year>
<Month>1</Month>
<Day>15</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline"><Year>2019</Year>
<Month>1</Month>
<Day>11</Day>
<Hour>6</Hour>
<Minute>0</Minute>
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<PubMedPubDate PubStatus="entrez"><Year>2018</Year>
<Month>1</Month>
<Day>15</Day>
<Hour>6</Hour>
<Minute>0</Minute>
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<PublicationStatus>ppublish</PublicationStatus>
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<li>Mozambique</li>
<li>Zimbabwe</li>
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Circulation of Alphacoronavirus, Betacoronavirus and Paramyxovirus in Hipposideros bat species in Zimbabwe.

Circulation of Alphacoronavirus, Betacoronavirus and Paramyxovirus in Hipposideros bat species in Zimbabwe.

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