SrasV1, Ncbi, Checkpoint, bibRecord, 001939

Detection of a Novel and Highly Divergent Coronavirus from Asian Leopard Cats and Chinese Ferret Badgers in Southern China▿

Identifieur interne : 001939 ( Ncbi/Checkpoint ); précédent : 001938; suivant : 001940

Detection of a Novel and Highly Divergent Coronavirus from Asian Leopard Cats and Chinese Ferret Badgers in Southern China▿

Auteurs : B. Q. Dong ; W. Liu ; X. H. Fan ; D. Vijaykrishna ; X. C. Tang ; F. Gao ; L. F. Li ; G. J. Li ; J. X. Zhang ; L. Q. Yang ; L. L. M. Poon ; S. Y. Zhang ; J. S. M. Peiris ; G. J. D. Smith ; H. Chen ; Y. Guan

Source :

Journal of Virology [ 0022-538X ] ; 2007.

RBID : PMC:1933311

Descripteurs français

KwdFr :
- Animaux, Chine, Coronavirus (), Coronavirus (enzymologie), Coronavirus (génétique), Coronavirus (isolement et purification), Données de séquences moléculaires, Felidae (virologie), Flambées de maladies (histoire), Histoire du 21ème siècle, Humains, Mustelidae (virologie), Phylogénie, Protéines virales (génétique), RNA helicases (génétique), RNA replicase (génétique), Syndrome respiratoire aigu sévère (histoire), Syndrome respiratoire aigu sévère (virologie), Syndrome respiratoire aigu sévère (épidémiologie), Séquence nucléotidique, Évolution moléculaire.
MESH :
- enzymologie : Coronavirus.
- génétique : Coronavirus, Protéines virales, RNA helicases, RNA replicase.
- histoire : Flambées de maladies, Syndrome respiratoire aigu sévère.
- isolement et purification : Coronavirus.
- virologie : Felidae, Mustelidae, Syndrome respiratoire aigu sévère.
- épidémiologie : Syndrome respiratoire aigu sévère.
- Animaux, Chine, Coronavirus, Données de séquences moléculaires, Histoire du 21ème siècle, Humains, Phylogénie, Séquence nucléotidique, Évolution moléculaire.
Wicri :
- geographic : République populaire de Chine.

English descriptors

KwdEn :
- Animals, Base Sequence, China, Coronavirus (classification), Coronavirus (enzymology), Coronavirus (genetics), Coronavirus (isolation & purification), Disease Outbreaks (history), Evolution, Molecular, Felidae (virology), History, 21st Century, Humans, Molecular Sequence Data, Mustelidae (virology), Phylogeny, RNA Helicases (genetics), RNA Replicase (genetics), Severe Acute Respiratory Syndrome (epidemiology), Severe Acute Respiratory Syndrome (history), Severe Acute Respiratory Syndrome (virology), Viral Proteins (genetics).
MESH :
- chemical , genetics : RNA Helicases, RNA Replicase, Viral Proteins.
- geographic : China.
- classification : Coronavirus.
- enzymology : Coronavirus.
- epidemiology : Severe Acute Respiratory Syndrome.
- genetics : Coronavirus.
- history : Disease Outbreaks, Severe Acute Respiratory Syndrome.
- isolation & purification : Coronavirus.
- virology : Felidae, Mustelidae, Severe Acute Respiratory Syndrome.
- Animals, Base Sequence, Evolution, Molecular, History, 21st Century, Humans, Molecular Sequence Data, Phylogeny.

Abstract

Since an outbreak of severe acute respiratory syndrome (SARS) was averted in 2004, many novel coronaviruses have been recognized from different species, including humans. Bats have provided the most diverse assemblages of coronaviruses, suggesting that they may be the natural reservoir. Continued virological surveillance has proven to be the best way to avert this infectious disease at the source. Here we provide the first description of a previously unidentified coronavirus lineage detected from wild Asian leopard cats (Prionailurus bengalensis) and Chinese ferret badgers (Melogale moschata) during virological surveillance in southern China. Partial genome analysis revealed a typical coronavirus genome but with a unique putative accessory gene organization. Phylogenetic analyses revealed that the envelope, membrane, and nucleoprotein structural proteins and the two conserved replicase domains, putative RNA-dependent RNA polymerase and RNA helicase, of these novel coronaviruses were most closely related to those of group 3 coronaviruses identified from birds, while the spike protein gene was most closely related to that of group 1 coronaviruses from mammals. However, these viruses always fell into an outgroup phylogenetic relationship with respect to other coronaviruses and had low amino acid similarity to all known coronavirus groups, indicating that they diverged early in the evolutionary history of coronaviruses. These results suggest that these viruses may represent a previously unrecognized evolutionary pathway, or possibly an unidentified coronavirus group. This study demonstrates the importance of systematic virological surveillance in market animals for understanding the evolution and emergence of viruses with infectious potential.

Url:

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1933311

DOI: 10.1128/JVI.00299-07
PubMed: 17459938
PubMed Central: 1933311

Affiliations:

Links to Exploration step

PMC:1933311

Le document en format XML

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<term>Coronavirus (enzymology)</term>
<term>Coronavirus (genetics)</term>
<term>Coronavirus (isolation & purification)</term>
<term>Disease Outbreaks (history)</term>
<term>Evolution, Molecular</term>
<term>Felidae (virology)</term>
<term>History, 21st Century</term>
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<term>Molecular Sequence Data</term>
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<term>Chine</term>
<term>Coronavirus ()</term>
<term>Coronavirus (enzymologie)</term>
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<term>Coronavirus (isolement et purification)</term>
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<front><div type="abstract" xml:lang="en"><p>Since an outbreak of severe acute respiratory syndrome (SARS) was averted in 2004, many novel coronaviruses have been recognized from different species, including humans. Bats have provided the most diverse assemblages of coronaviruses, suggesting that they may be the natural reservoir. Continued virological surveillance has proven to be the best way to avert this infectious disease at the source. Here we provide the first description of a previously unidentified coronavirus lineage detected from wild Asian leopard cats (<italic>Prionailurus bengalensis</italic>
) and Chinese ferret badgers (<italic>Melogale moschata</italic>
) during virological surveillance in southern China. Partial genome analysis revealed a typical coronavirus genome but with a unique putative accessory gene organization. Phylogenetic analyses revealed that the envelope, membrane, and nucleoprotein structural proteins and the two conserved replicase domains, putative RNA-dependent RNA polymerase and RNA helicase, of these novel coronaviruses were most closely related to those of group 3 coronaviruses identified from birds, while the spike protein gene was most closely related to that of group 1 coronaviruses from mammals. However, these viruses always fell into an outgroup phylogenetic relationship with respect to other coronaviruses and had low amino acid similarity to all known coronavirus groups, indicating that they diverged early in the evolutionary history of coronaviruses. These results suggest that these viruses may represent a previously unrecognized evolutionary pathway, or possibly an unidentified coronavirus group. This study demonstrates the importance of systematic virological surveillance in market animals for understanding the evolution and emergence of viruses with infectious potential.</p>
</div>
</front>
</TEI>
<affiliations><list></list>
<tree><noCountry><name sortKey="Chen, H" sort="Chen, H" uniqKey="Chen H" first="H." last="Chen">H. Chen</name>
<name sortKey="Dong, B Q" sort="Dong, B Q" uniqKey="Dong B" first="B. Q." last="Dong">B. Q. Dong</name>
<name sortKey="Fan, X H" sort="Fan, X H" uniqKey="Fan X" first="X. H." last="Fan">X. H. Fan</name>
<name sortKey="Gao, F" sort="Gao, F" uniqKey="Gao F" first="F." last="Gao">F. Gao</name>
<name sortKey="Guan, Y" sort="Guan, Y" uniqKey="Guan Y" first="Y." last="Guan">Y. Guan</name>
<name sortKey="Li, G J" sort="Li, G J" uniqKey="Li G" first="G. J." last="Li">G. J. Li</name>
<name sortKey="Li, L F" sort="Li, L F" uniqKey="Li L" first="L. F." last="Li">L. F. Li</name>
<name sortKey="Liu, W" sort="Liu, W" uniqKey="Liu W" first="W." last="Liu">W. Liu</name>
<name sortKey="Peiris, J S M" sort="Peiris, J S M" uniqKey="Peiris J" first="J. S. M." last="Peiris">J. S. M. Peiris</name>
<name sortKey="Poon, L L M" sort="Poon, L L M" uniqKey="Poon L" first="L. L. M." last="Poon">L. L. M. Poon</name>
<name sortKey="Smith, G J D" sort="Smith, G J D" uniqKey="Smith G" first="G. J. D." last="Smith">G. J. D. Smith</name>
<name sortKey="Tang, X C" sort="Tang, X C" uniqKey="Tang X" first="X. C." last="Tang">X. C. Tang</name>
<name sortKey="Vijaykrishna, D" sort="Vijaykrishna, D" uniqKey="Vijaykrishna D" first="D." last="Vijaykrishna">D. Vijaykrishna</name>
<name sortKey="Yang, L Q" sort="Yang, L Q" uniqKey="Yang L" first="L. Q." last="Yang">L. Q. Yang</name>
<name sortKey="Zhang, J X" sort="Zhang, J X" uniqKey="Zhang J" first="J. X." last="Zhang">J. X. Zhang</name>
<name sortKey="Zhang, S Y" sort="Zhang, S Y" uniqKey="Zhang S" first="S. Y." last="Zhang">S. Y. Zhang</name>
</noCountry>
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Detection of a Novel and Highly Divergent Coronavirus from Asian Leopard Cats and Chinese Ferret Badgers in Southern China▿

Detection of a Novel and Highly Divergent Coronavirus from Asian Leopard Cats and Chinese Ferret Badgers in Southern China▿

Source :

Descripteurs français

English descriptors

Abstract

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Links to Exploration step

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	Serveur d'exploration SRAS
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