The Papain-Like Protease of Severe Acute Respiratory Syndrome Coronavirus Has Deubiquitinating Activity
Identifieur interne : 001277 ( Ncbi/Checkpoint ); précédent : 001276; suivant : 001278The Papain-Like Protease of Severe Acute Respiratory Syndrome Coronavirus Has Deubiquitinating Activity
Auteurs : Naina Barretto ; Dalia Jukneliene ; Kiira Ratia ; Zhongbin Chen ; Andrew D. Mesecar ; Susan C. BakerSource :
- Journal of Virology [ 0022-538X ] ; 2005.
Descripteurs français
- KwdFr :
- Cellules HeLa, Domaine catalytique, Données de séquences moléculaires, Humains, Papaïne (), Papaïne (métabolisme), Peptide hydrolases (génétique), Peptide hydrolases (métabolisme), Spécificité du substrat, Séquence d'acides aminés, Ubiquitine (métabolisme), Virus du SRAS (enzymologie), Virus du SRAS (génétique), Virus du SRAS (physiologie).
- MESH :
- enzymologie : Virus du SRAS.
- génétique : Peptide hydrolases, Virus du SRAS.
- métabolisme : Papaïne, Peptide hydrolases, Ubiquitine.
- physiologie : Virus du SRAS.
- Cellules HeLa, Domaine catalytique, Données de séquences moléculaires, Humains, Papaïne, Spécificité du substrat, Séquence d'acides aminés.
English descriptors
- KwdEn :
- Amino Acid Sequence, Catalytic Domain, HeLa Cells, Humans, Molecular Sequence Data, Papain (chemistry), Papain (metabolism), Peptide Hydrolases (genetics), Peptide Hydrolases (metabolism), SARS Virus (enzymology), SARS Virus (genetics), SARS Virus (physiology), Substrate Specificity, Ubiquitin (metabolism).
- MESH :
- chemical , chemistry : Papain.
- chemical , genetics : Peptide Hydrolases.
- chemical , metabolism : Papain, Peptide Hydrolases, Ubiquitin.
- enzymology : SARS Virus.
- genetics : SARS Virus.
- physiology : SARS Virus.
- Amino Acid Sequence, Catalytic Domain, HeLa Cells, Humans, Molecular Sequence Data, Substrate Specificity.
Abstract
Replication of the genomic RNA of severe acute respiratory syndrome coronavirus (SARS-CoV) is mediated by replicase polyproteins that are processed by two viral proteases, papain-like protease (PLpro) and 3C-like protease (3CLpro). Previously, we showed that SARS-CoV PLpro processes the replicase polyprotein at three conserved cleavage sites. Here, we report the identification and characterization of a 316-amino-acid catalytic core domain of PLpro that can efficiently cleave replicase substrates in
Url:
DOI: 10.1128/JVI.79.24.15189-15198.2005
PubMed: 16306590
PubMed Central: 1316023
Affiliations:
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PMC:1316023Le document en format XML
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<term>Molecular Sequence Data</term>
<term>Papain (chemistry)</term>
<term>Papain (metabolism)</term>
<term>Peptide Hydrolases (genetics)</term>
<term>Peptide Hydrolases (metabolism)</term>
<term>SARS Virus (enzymology)</term>
<term>SARS Virus (genetics)</term>
<term>SARS Virus (physiology)</term>
<term>Substrate Specificity</term>
<term>Ubiquitin (metabolism)</term>
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<term>Domaine catalytique</term>
<term>Données de séquences moléculaires</term>
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<term>Papaïne ()</term>
<term>Papaïne (métabolisme)</term>
<term>Peptide hydrolases (génétique)</term>
<term>Peptide hydrolases (métabolisme)</term>
<term>Spécificité du substrat</term>
<term>Séquence d'acides aminés</term>
<term>Ubiquitine (métabolisme)</term>
<term>Virus du SRAS (enzymologie)</term>
<term>Virus du SRAS (génétique)</term>
<term>Virus du SRAS (physiologie)</term>
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<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>SARS Virus</term>
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<front><div type="abstract" xml:lang="en"><p>Replication of the genomic RNA of severe acute respiratory syndrome coronavirus (SARS-CoV) is mediated by replicase polyproteins that are processed by two viral proteases, papain-like protease (PLpro) and 3C-like protease (3CLpro). Previously, we showed that SARS-CoV PLpro processes the replicase polyprotein at three conserved cleavage sites. Here, we report the identification and characterization of a 316-amino-acid catalytic core domain of PLpro that can efficiently cleave replicase substrates in <italic>trans</italic>
-cleavage assays and peptide substrates in fluorescent resonance energy transfer-based protease assays. We performed bioinformatics analysis on 16 papain-like protease domains from nine different coronaviruses and identified a putative catalytic triad (Cys1651-His1812-Asp1826) and zinc-binding site. Mutagenesis studies revealed that Asp1826 and the four cysteine residues involved in zinc binding are essential for SARS-CoV PLpro activity. Molecular modeling of SARS-CoV PLpro suggested that this catalytic core may also have deubiquitinating activity. We tested this hypothesis by measuring the deubiquitinating activity of PLpro by two independent assays. SARS CoV-PLpro hydrolyzed both diubiquitin and ubiquitin-7-amino-4-methylcoumarin (AMC) substrates, and hydrolysis of ubiquitin-AMC is approximately 180-fold more efficient than hydrolysis of a peptide substrate that mimics the PLpro replicase recognition sequence. To investigate the critical determinants recognized by PLpro, we performed site-directed mutagenesis on the P6 to P2′ residues at each of the three PLpro cleavage sites. We found that PLpro recognizes the consensus cleavage sequence LXGG, which is also the consensus sequence recognized by cellular deubiquitinating enzymes. This similarity in the substrate recognition sites should be considered during the development of SARS-CoV PLpro inhibitors.</p>
</div>
</front>
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<tree><noCountry><name sortKey="Baker, Susan C" sort="Baker, Susan C" uniqKey="Baker S" first="Susan C." last="Baker">Susan C. Baker</name>
<name sortKey="Barretto, Naina" sort="Barretto, Naina" uniqKey="Barretto N" first="Naina" last="Barretto">Naina Barretto</name>
<name sortKey="Chen, Zhongbin" sort="Chen, Zhongbin" uniqKey="Chen Z" first="Zhongbin" last="Chen">Zhongbin Chen</name>
<name sortKey="Jukneliene, Dalia" sort="Jukneliene, Dalia" uniqKey="Jukneliene D" first="Dalia" last="Jukneliene">Dalia Jukneliene</name>
<name sortKey="Mesecar, Andrew D" sort="Mesecar, Andrew D" uniqKey="Mesecar A" first="Andrew D." last="Mesecar">Andrew D. Mesecar</name>
<name sortKey="Ratia, Kiira" sort="Ratia, Kiira" uniqKey="Ratia K" first="Kiira" last="Ratia">Kiira Ratia</name>
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