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Evaluation of peptide-aldehyde inhibitors using R188I mutant of SARS 3CL protease as a proteolysis-resistant mutant

Identifieur interne : 003504 ( Main/Exploration ); précédent : 003503; suivant : 003505

Evaluation of peptide-aldehyde inhibitors using R188I mutant of SARS 3CL protease as a proteolysis-resistant mutant

Auteurs : Kenichi Akaji [Japon] ; Hiroyuki Konno [Japon] ; Mari Onozuka [Japon] ; Ayumi Makino [Japon] ; Hiroyuki Saito [Japon] ; Kazuto Nosaka [Japon]

Source :

RBID : Pascal:09-0041831

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Abstract

The 3C-like (3CL) protease of the severe acute respiratory syndrome (SARS) coronavirus is a key enzyme for the virus maturation. We found for the first time that the mature SARS 3CL protease is subject to degradation at 188Arg/189Gln. Replacing Arg with lle at position 188 rendered the protease resistant to proteolysis. The R188I mutant digested a conserved undecapeptide substrate with a Km of 33.8 μM and kcat of 4753 s-1. Compared with the value reported for the mature protease containing a C-terminal His-tag, the relative activity of the mutant was nearly 106. Novel peptide-aldehyde derivatives containing a side-chain-protected C-terminal Gln efficiently inhibited the catalytic activity of the R188I mutant. The results indicated for the first time that the tetrapeptide sequence is enough for inhibitory activities of peptide-aldehyde derivatives.

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Le document en format XML

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<term>Aldehyde</term>
<term>Aldehydes (chemical synthesis)</term>
<term>Aldehydes (pharmacology)</term>
<term>Amino Acid Sequence</term>
<term>Binding Sites</term>
<term>Biological activity</term>
<term>Chemical synthesis</term>
<term>Cysteine Endopeptidases (genetics)</term>
<term>Cysteine Endopeptidases (metabolism)</term>
<term>Cysteine endopeptidases</term>
<term>Enzyme inhibitor</term>
<term>Humans</term>
<term>Hydrolysis</term>
<term>Hydrolysis resistance</term>
<term>In vitro</term>
<term>Models, Molecular</term>
<term>Molecular Sequence Data</term>
<term>Molecular Structure</term>
<term>Mutation</term>
<term>Mutation (genetics)</term>
<term>Peptide synthesis</term>
<term>Peptides</term>
<term>Protease Inhibitors (chemical synthesis)</term>
<term>Protease Inhibitors (pharmacology)</term>
<term>Protease inhibitor</term>
<term>Protein Conformation</term>
<term>Protein Processing, Post-Translational</term>
<term>SARS Virus (enzymology)</term>
<term>SARS Virus (genetics)</term>
<term>SARS Virus (metabolism)</term>
<term>Severe Acute Respiratory Syndrome (genetics)</term>
<term>Severe acute respiratory syndrome virus</term>
<term>Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization</term>
<term>Substrate Specificity</term>
<term>Viral Proteins (antagonists & inhibitors)</term>
<term>Viral Proteins (genetics)</term>
<term>Viral Proteins (metabolism)</term>
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<term>Cysteine endopeptidases (génétique)</term>
<term>Cysteine endopeptidases (métabolisme)</term>
<term>Données de séquences moléculaires</term>
<term>Humains</term>
<term>Hydrolyse</term>
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<term>Inhibiteurs de protéases (synthèse chimique)</term>
<term>Maturation post-traductionnelle des protéines</term>
<term>Modèles moléculaires</term>
<term>Mutation (génétique)</term>
<term>Protéines virales (antagonistes et inhibiteurs)</term>
<term>Protéines virales (génétique)</term>
<term>Protéines virales (métabolisme)</term>
<term>Sites de fixation</term>
<term>Spectrométrie de masse MALDI</term>
<term>Spécificité du substrat</term>
<term>Structure moléculaire</term>
<term>Syndrome respiratoire aigu sévère (génétique)</term>
<term>Séquence d'acides aminés</term>
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<term>Virus du SRAS (génétique)</term>
<term>Virus du SRAS (métabolisme)</term>
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<keywords scheme="MESH" type="chemical" qualifier="chemical synthesis" xml:lang="en">
<term>Aldehydes</term>
<term>Protease Inhibitors</term>
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<term>Cysteine Endopeptidases</term>
<term>Viral Proteins</term>
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<term>Viral Proteins</term>
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<term>Protease Inhibitors</term>
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<term>SARS Virus</term>
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<term>Mutation</term>
<term>SARS Virus</term>
<term>Severe Acute Respiratory Syndrome</term>
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<term>Cysteine endopeptidases</term>
<term>Mutation</term>
<term>Protéines virales</term>
<term>Syndrome respiratoire aigu sévère</term>
<term>Virus du SRAS</term>
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<term>Cysteine endopeptidases</term>
<term>Protéines virales</term>
<term>Virus du SRAS</term>
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<term>Inhibiteurs de protéases</term>
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<term>Aldéhydes</term>
<term>Inhibiteurs de protéases</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Amino Acid Sequence</term>
<term>Binding Sites</term>
<term>Humans</term>
<term>Hydrolysis</term>
<term>Models, Molecular</term>
<term>Molecular Sequence Data</term>
<term>Molecular Structure</term>
<term>Protein Conformation</term>
<term>Protein Processing, Post-Translational</term>
<term>Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization</term>
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<term>Conformation des protéines</term>
<term>Données de séquences moléculaires</term>
<term>Humains</term>
<term>Hydrolyse</term>
<term>Maturation post-traductionnelle des protéines</term>
<term>Modèles moléculaires</term>
<term>Peptide</term>
<term>Aldéhyde</term>
<term>Inhibiteur protease</term>
<term>Mutation</term>
<term>Cysteine endopeptidases</term>
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<term>Spectrométrie de masse MALDI</term>
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<term>Structure moléculaire</term>
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<term>Synthèse peptidique</term>
<term>In vitro</term>
<term>Inhibiteur enzyme</term>
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<front>
<div type="abstract" xml:lang="en">The 3C-like (3CL) protease of the severe acute respiratory syndrome (SARS) coronavirus is a key enzyme for the virus maturation. We found for the first time that the mature SARS 3CL protease is subject to degradation at 188Arg/189Gln. Replacing Arg with lle at position 188 rendered the protease resistant to proteolysis. The R188I mutant digested a conserved undecapeptide substrate with a K
<sub>m</sub>
of 33.8 μM and k
<sub>cat</sub>
of 4753 s
<sup>-1</sup>
. Compared with the value reported for the mature protease containing a C-terminal His-tag, the relative activity of the mutant was nearly 10
<sup>6</sup>
. Novel peptide-aldehyde derivatives containing a side-chain-protected C-terminal Gln efficiently inhibited the catalytic activity of the R188I mutant. The results indicated for the first time that the tetrapeptide sequence is enough for inhibitory activities of peptide-aldehyde derivatives.</div>
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<name sortKey="Akaji, Kenichi" sort="Akaji, Kenichi" uniqKey="Akaji K" first="Kenichi" last="Akaji">Kenichi Akaji</name>
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<name sortKey="Onozuka, Mari" sort="Onozuka, Mari" uniqKey="Onozuka M" first="Mari" last="Onozuka">Mari Onozuka</name>
<name sortKey="Saito, Hiroyuki" sort="Saito, Hiroyuki" uniqKey="Saito H" first="Hiroyuki" last="Saito">Hiroyuki Saito</name>
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