Serveur d'exploration SRAS

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Isolation of a novel coronavirus from a man with pneumonia in Saudi Arabia.

Identifieur interne : 001D00 ( Main/Exploration ); précédent : 001C99; suivant : 001D01

Isolation of a novel coronavirus from a man with pneumonia in Saudi Arabia.

Auteurs : Ali M. Zaki [Arabie saoudite] ; Sander Van Boheemen ; Theo M. Bestebroer ; Albert D M E. Osterhaus ; Ron A M. Fouchier

Source :

RBID : pubmed:23075143

Descripteurs français

English descriptors

Abstract

A previously unknown coronavirus was isolated from the sputum of a 60-year-old man who presented with acute pneumonia and subsequent renal failure with a fatal outcome in Saudi Arabia. The virus (called HCoV-EMC) replicated readily in cell culture, producing cytopathic effects of rounding, detachment, and syncytium formation. The virus represents a novel betacoronavirus species. The closest known relatives are bat coronaviruses HKU4 and HKU5. Here, the clinical data, virus isolation, and molecular identification are presented. The clinical picture was remarkably similar to that of the severe acute respiratory syndrome (SARS) outbreak in 2003 and reminds us that animal coronaviruses can cause severe disease in humans.

DOI: 10.1056/NEJMoa1211721
PubMed: 23075143


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Isolation of a novel coronavirus from a man with pneumonia in Saudi Arabia.</title>
<author>
<name sortKey="Zaki, Ali M" sort="Zaki, Ali M" uniqKey="Zaki A" first="Ali M" last="Zaki">Ali M. Zaki</name>
<affiliation wicri:level="1">
<nlm:affiliation>Dr Soliman Fakeeh Hospital, Jeddah, Saudi Arabia.</nlm:affiliation>
<country xml:lang="fr">Arabie saoudite</country>
<wicri:regionArea>Dr Soliman Fakeeh Hospital, Jeddah</wicri:regionArea>
<wicri:noRegion>Jeddah</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Van Boheemen, Sander" sort="Van Boheemen, Sander" uniqKey="Van Boheemen S" first="Sander" last="Van Boheemen">Sander Van Boheemen</name>
</author>
<author>
<name sortKey="Bestebroer, Theo M" sort="Bestebroer, Theo M" uniqKey="Bestebroer T" first="Theo M" last="Bestebroer">Theo M. Bestebroer</name>
</author>
<author>
<name sortKey="Osterhaus, Albert D M E" sort="Osterhaus, Albert D M E" uniqKey="Osterhaus A" first="Albert D M E" last="Osterhaus">Albert D M E. Osterhaus</name>
</author>
<author>
<name sortKey="Fouchier, Ron A M" sort="Fouchier, Ron A M" uniqKey="Fouchier R" first="Ron A M" last="Fouchier">Ron A M. Fouchier</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2012">2012</date>
<idno type="RBID">pubmed:23075143</idno>
<idno type="pmid">23075143</idno>
<idno type="doi">10.1056/NEJMoa1211721</idno>
<idno type="wicri:Area/PubMed/Corpus">001294</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001294</idno>
<idno type="wicri:Area/PubMed/Curation">001294</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001294</idno>
<idno type="wicri:Area/PubMed/Checkpoint">001330</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">001330</idno>
<idno type="wicri:Area/Ncbi/Merge">002576</idno>
<idno type="wicri:Area/Ncbi/Curation">002576</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">002576</idno>
<idno type="wicri:Area/Main/Merge">001D18</idno>
<idno type="wicri:Area/Main/Curation">001D00</idno>
<idno type="wicri:Area/Main/Exploration">001D00</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Isolation of a novel coronavirus from a man with pneumonia in Saudi Arabia.</title>
<author>
<name sortKey="Zaki, Ali M" sort="Zaki, Ali M" uniqKey="Zaki A" first="Ali M" last="Zaki">Ali M. Zaki</name>
<affiliation wicri:level="1">
<nlm:affiliation>Dr Soliman Fakeeh Hospital, Jeddah, Saudi Arabia.</nlm:affiliation>
<country xml:lang="fr">Arabie saoudite</country>
<wicri:regionArea>Dr Soliman Fakeeh Hospital, Jeddah</wicri:regionArea>
<wicri:noRegion>Jeddah</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Van Boheemen, Sander" sort="Van Boheemen, Sander" uniqKey="Van Boheemen S" first="Sander" last="Van Boheemen">Sander Van Boheemen</name>
</author>
<author>
<name sortKey="Bestebroer, Theo M" sort="Bestebroer, Theo M" uniqKey="Bestebroer T" first="Theo M" last="Bestebroer">Theo M. Bestebroer</name>
</author>
<author>
<name sortKey="Osterhaus, Albert D M E" sort="Osterhaus, Albert D M E" uniqKey="Osterhaus A" first="Albert D M E" last="Osterhaus">Albert D M E. Osterhaus</name>
</author>
<author>
<name sortKey="Fouchier, Ron A M" sort="Fouchier, Ron A M" uniqKey="Fouchier R" first="Ron A M" last="Fouchier">Ron A M. Fouchier</name>
</author>
</analytic>
<series>
<title level="j">The New England journal of medicine</title>
<idno type="eISSN">1533-4406</idno>
<imprint>
<date when="2012" type="published">2012</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Blood Cell Count</term>
<term>Blood Urea Nitrogen</term>
<term>Coronavirus (classification)</term>
<term>Coronavirus (genetics)</term>
<term>Coronavirus (isolation & purification)</term>
<term>Coronavirus (physiology)</term>
<term>Creatinine (blood)</term>
<term>DNA, Viral (analysis)</term>
<term>Fatal Outcome</term>
<term>Genome, Viral</term>
<term>Humans</term>
<term>Lung (diagnostic imaging)</term>
<term>Male</term>
<term>Middle Aged</term>
<term>Phylogeny</term>
<term>Pneumonia, Viral (complications)</term>
<term>Pneumonia, Viral (diagnostic imaging)</term>
<term>Pneumonia, Viral (virology)</term>
<term>Radiography</term>
<term>Renal Insufficiency (etiology)</term>
<term>Reverse Transcriptase Polymerase Chain Reaction</term>
<term>Sputum (virology)</term>
<term>Virus Replication (physiology)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>ADN viral (analyse)</term>
<term>Adulte d'âge moyen</term>
<term>Azote uréique sanguin</term>
<term>Coronavirus ()</term>
<term>Coronavirus (génétique)</term>
<term>Coronavirus (isolement et purification)</term>
<term>Coronavirus (physiologie)</term>
<term>Créatinine (sang)</term>
<term>Expectoration (virologie)</term>
<term>Génome viral</term>
<term>Humains</term>
<term>Insuffisance rénale (étiologie)</term>
<term>Issue fatale</term>
<term>Mâle</term>
<term>Numération formule sanguine</term>
<term>Phylogénie</term>
<term>Pneumopathie virale ()</term>
<term>Pneumopathie virale (imagerie diagnostique)</term>
<term>Pneumopathie virale (virologie)</term>
<term>Poumon (imagerie diagnostique)</term>
<term>RT-PCR</term>
<term>Radiographie</term>
<term>Réplication virale (physiologie)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en">
<term>DNA, Viral</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="blood" xml:lang="en">
<term>Creatinine</term>
</keywords>
<keywords scheme="MESH" qualifier="analyse" xml:lang="fr">
<term>ADN viral</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en">
<term>Coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="complications" xml:lang="en">
<term>Pneumonia, Viral</term>
</keywords>
<keywords scheme="MESH" qualifier="diagnostic imaging" xml:lang="en">
<term>Lung</term>
<term>Pneumonia, Viral</term>
</keywords>
<keywords scheme="MESH" qualifier="etiology" xml:lang="en">
<term>Renal Insufficiency</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en">
<term>Coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr">
<term>Coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="imagerie diagnostique" xml:lang="fr">
<term>Pneumopathie virale</term>
<term>Poumon</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en">
<term>Coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr">
<term>Coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="physiologie" xml:lang="fr">
<term>Coronavirus</term>
<term>Réplication virale</term>
</keywords>
<keywords scheme="MESH" qualifier="physiology" xml:lang="en">
<term>Coronavirus</term>
<term>Virus Replication</term>
</keywords>
<keywords scheme="MESH" qualifier="sang" xml:lang="fr">
<term>Créatinine</term>
</keywords>
<keywords scheme="MESH" qualifier="virologie" xml:lang="fr">
<term>Expectoration</term>
<term>Pneumopathie virale</term>
</keywords>
<keywords scheme="MESH" qualifier="virology" xml:lang="en">
<term>Pneumonia, Viral</term>
<term>Sputum</term>
</keywords>
<keywords scheme="MESH" qualifier="étiologie" xml:lang="fr">
<term>Insuffisance rénale</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Blood Cell Count</term>
<term>Blood Urea Nitrogen</term>
<term>Fatal Outcome</term>
<term>Genome, Viral</term>
<term>Humans</term>
<term>Male</term>
<term>Middle Aged</term>
<term>Phylogeny</term>
<term>Radiography</term>
<term>Reverse Transcriptase Polymerase Chain Reaction</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Adulte d'âge moyen</term>
<term>Azote uréique sanguin</term>
<term>Coronavirus</term>
<term>Génome viral</term>
<term>Humains</term>
<term>Issue fatale</term>
<term>Mâle</term>
<term>Numération formule sanguine</term>
<term>Phylogénie</term>
<term>Pneumopathie virale</term>
<term>RT-PCR</term>
<term>Radiographie</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">A previously unknown coronavirus was isolated from the sputum of a 60-year-old man who presented with acute pneumonia and subsequent renal failure with a fatal outcome in Saudi Arabia. The virus (called HCoV-EMC) replicated readily in cell culture, producing cytopathic effects of rounding, detachment, and syncytium formation. The virus represents a novel betacoronavirus species. The closest known relatives are bat coronaviruses HKU4 and HKU5. Here, the clinical data, virus isolation, and molecular identification are presented. The clinical picture was remarkably similar to that of the severe acute respiratory syndrome (SARS) outbreak in 2003 and reminds us that animal coronaviruses can cause severe disease in humans.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>Arabie saoudite</li>
</country>
</list>
<tree>
<noCountry>
<name sortKey="Bestebroer, Theo M" sort="Bestebroer, Theo M" uniqKey="Bestebroer T" first="Theo M" last="Bestebroer">Theo M. Bestebroer</name>
<name sortKey="Fouchier, Ron A M" sort="Fouchier, Ron A M" uniqKey="Fouchier R" first="Ron A M" last="Fouchier">Ron A M. Fouchier</name>
<name sortKey="Osterhaus, Albert D M E" sort="Osterhaus, Albert D M E" uniqKey="Osterhaus A" first="Albert D M E" last="Osterhaus">Albert D M E. Osterhaus</name>
<name sortKey="Van Boheemen, Sander" sort="Van Boheemen, Sander" uniqKey="Van Boheemen S" first="Sander" last="Van Boheemen">Sander Van Boheemen</name>
</noCountry>
<country name="Arabie saoudite">
<noRegion>
<name sortKey="Zaki, Ali M" sort="Zaki, Ali M" uniqKey="Zaki A" first="Ali M" last="Zaki">Ali M. Zaki</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001D00 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001D00 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    SrasV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:23075143
   |texte=   Isolation of a novel coronavirus from a man with pneumonia in Saudi Arabia.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:23075143" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a SrasV1 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Tue Apr 28 14:49:16 2020. Site generation: Sat Mar 27 22:06:49 2021