Detection of Coronaviruses in Bats of Various Species in Italy
Identifieur interne : 001963 ( Main/Exploration ); précédent : 001962; suivant : 001964Detection of Coronaviruses in Bats of Various Species in Italy
Auteurs : Davide Lelli ; Alice Papetti ; Cristiano Sabelli ; Enrica Rosti ; Ana Moreno ; Maria B. BoniottiSource :
- Viruses [ 1999-4915 ] ; 2013.
Descripteurs français
- KwdFr :
- MESH :
- génétique : Coronavirus.
- isolement et purification : Coronavirus.
- virologie : Chiroptera, Fèces.
- Animaux, Coronavirus, Données de séquences moléculaires, Italie, Phylogénie.
- Wicri :
- geographic : Italie.
English descriptors
- KwdEn :
- MESH :
- geographic : Italy.
- classification : Coronavirus.
- genetics : Coronavirus.
- isolation & purification : Coronavirus.
- virology : Chiroptera, Feces.
- Animals, Molecular Sequence Data, Phylogeny.
Abstract
Bats are natural reservoirs for many mammalian coronaviruses, which have received renewed interest after the discovery of the severe acute respiratory syndrome (SARS) and the Middle East respiratory syndrome (MERS) CoV in humans. This study describes the identification and molecular characterization of alphacoronaviruses and betacoronaviruses in bats in Italy, from 2010 to 2012. Sixty-nine faecal samples and 126 carcasses were tested using pan-coronavirus RT-PCR. Coronavirus RNAs were detected in seven faecal samples and nine carcasses. A phylogenetic analysis of RNA-dependent RNA polymerase sequence fragments aided in identifying two alphacoronaviruses from Kuhl’s pipistrelle (
Url:
DOI: 10.3390/v5112679
PubMed: 24184965
PubMed Central: 3856409
Affiliations:
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Le document en format XML
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Zeno 99/A, Brescia 25124, Italy; E-Mail:<email>cristianosabelli@izo.it</email></nlm:aff></affiliation></author><author><name sortKey="Rosti, Enrica" sort="Rosti, Enrica" uniqKey="Rosti E" first="Enrica" last="Rosti">Enrica Rosti</name><affiliation><nlm:aff id="af3-viruses-05-02679">Centro Fauna Selvatica “Il Pettirosso”, Via Nonantolana 1217, Modena 41122, Italy; E-Mail:<email>enrica.rosti@gmail.com</email></nlm:aff></affiliation></author><author><name sortKey="Moreno, Ana" sort="Moreno, Ana" uniqKey="Moreno A" first="Ana" last="Moreno">Ana Moreno</name><affiliation><nlm:aff id="af1-viruses-05-02679">Istituto Zooprofilattico Sperimentale della Lombardia e dell’Emilia Romagna, Via Bianchi 9, Brescia 25124, Italy; E-Mails:<email>alice.papetti@izsler.it</email> (A.P.);<email>anamaria.morenomartin@izsler.it</email> (A.M.);<email>mariabeatrice.boniotti@izsler.it</email> (M.B.B.)</nlm:aff></affiliation></author><author><name sortKey="Boniotti, Maria B" sort="Boniotti, Maria B" uniqKey="Boniotti M" first="Maria B." last="Boniotti">Maria B. Boniotti</name><affiliation><nlm:aff id="af1-viruses-05-02679">Istituto Zooprofilattico Sperimentale della Lombardia e dell’Emilia Romagna, Via Bianchi 9, Brescia 25124, Italy; E-Mails:<email>alice.papetti@izsler.it</email> (A.P.);<email>anamaria.morenomartin@izsler.it</email> (A.M.);<email>mariabeatrice.boniotti@izsler.it</email> (M.B.B.)</nlm:aff></affiliation></author></analytic><series><title level="j">Viruses</title><idno type="eISSN">1999-4915</idno><imprint><date when="2013">2013</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>Chiroptera (virology)</term><term>Coronavirus (classification)</term><term>Coronavirus (genetics)</term><term>Coronavirus (isolation & purification)</term><term>Feces (virology)</term><term>Italy</term><term>Molecular Sequence Data</term><term>Phylogeny</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Animaux</term><term>Chiroptera (virologie)</term><term>Coronavirus ()</term><term>Coronavirus (génétique)</term><term>Coronavirus (isolement et purification)</term><term>Données de séquences moléculaires</term><term>Fèces (virologie)</term><term>Italie</term><term>Phylogénie</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Italy</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Chiroptera</term><term>Fèces</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Chiroptera</term><term>Feces</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Molecular Sequence Data</term><term>Phylogeny</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Coronavirus</term><term>Données de séquences moléculaires</term><term>Italie</term><term>Phylogénie</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Italie</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Bats are natural reservoirs for many mammalian coronaviruses, which have received renewed interest after the discovery of the severe acute respiratory syndrome (SARS) and the Middle East respiratory syndrome (MERS) CoV in humans. This study describes the identification and molecular characterization of alphacoronaviruses and betacoronaviruses in bats in Italy, from 2010 to 2012. Sixty-nine faecal samples and 126 carcasses were tested using pan-coronavirus RT-PCR. Coronavirus RNAs were detected in seven faecal samples and nine carcasses. A phylogenetic analysis of RNA-dependent RNA polymerase sequence fragments aided in identifying two alphacoronaviruses from Kuhl’s pipistrelle (<italic>Pipistrellus kuhlii</italic>), three clade 2b betacoronaviruses from lesser horseshoe bats (<italic>Rhinolophus hipposideros</italic>), and 10 clade 2c betacoronaviruses from Kuhl’s pipistrelle, common noctule (<italic>Nyctalus noctula</italic>), and Savi’s pipistrelle (<italic>Hypsugo savii</italic>). This study fills a substantive gap in the knowledge on bat-CoV ecology in Italy, and extends the current knowledge on clade 2c betacoronaviruses with new sequences obtained from bats that have not been previously described as hosts of these viruses.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Woo, P C" uniqKey="Woo P">P.C. Woo</name></author><author><name sortKey="Lau, S K" uniqKey="Lau S">S.K. Lau</name></author><author><name sortKey="Huang, Y" uniqKey="Huang Y">Y. Huang</name></author><author><name sortKey="Yuen, K Y" uniqKey="Yuen K">K.Y. Yuen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="De Groot, R J" uniqKey="De Groot R">R.J. De Groot</name></author><author><name sortKey="Baker, S C" uniqKey="Baker S">S.C. Baker</name></author><author><name sortKey="Baric, R" uniqKey="Baric R">R. Baric</name></author><author><name sortKey="Enjuanes, L" uniqKey="Enjuanes L">L. 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Ipsen</name></author><author><name sortKey="Seebens, A" uniqKey="Seebens A">A. Seebens</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lau, S K" uniqKey="Lau S">S.K. Lau</name></author><author><name sortKey="Li, K S" uniqKey="Li K">K.S. Li</name></author><author><name sortKey="Tsang, A K" uniqKey="Tsang A">A.K. Tsang</name></author><author><name sortKey="Lam, C S" uniqKey="Lam C">C.S. Lam</name></author><author><name sortKey="Ahmed, S" uniqKey="Ahmed S">S. Ahmed</name></author><author><name sortKey="Chen, H" uniqKey="Chen H">H. Chen</name></author><author><name sortKey="Chan, K H" uniqKey="Chan K">K.H. Chan</name></author><author><name sortKey="Woo, P C" uniqKey="Woo P">P.C. Woo</name></author><author><name sortKey="Yuen, K Y" uniqKey="Yuen K">K.Y. Yuen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Medellin, R A" uniqKey="Medellin R">R.A. Medellín</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list></list><tree><noCountry><name sortKey="Boniotti, Maria B" sort="Boniotti, Maria B" uniqKey="Boniotti M" first="Maria B." last="Boniotti">Maria B. Boniotti</name><name sortKey="Lelli, Davide" sort="Lelli, Davide" uniqKey="Lelli D" first="Davide" last="Lelli">Davide Lelli</name><name sortKey="Moreno, Ana" sort="Moreno, Ana" uniqKey="Moreno A" first="Ana" last="Moreno">Ana Moreno</name><name sortKey="Papetti, Alice" sort="Papetti, Alice" uniqKey="Papetti A" first="Alice" last="Papetti">Alice Papetti</name><name sortKey="Rosti, Enrica" sort="Rosti, Enrica" uniqKey="Rosti E" first="Enrica" last="Rosti">Enrica Rosti</name><name sortKey="Sabelli, Cristiano" sort="Sabelli, Cristiano" uniqKey="Sabelli C" first="Cristiano" last="Sabelli">Cristiano Sabelli</name></noCountry></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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