Genomic and serological detection of bat coronavirus from bats in the Philippines
Identifieur interne : 000217 ( Istex/Curation ); précédent : 000216; suivant : 000218Genomic and serological detection of bat coronavirus from bats in the Philippines
Auteurs : Shumpei Tsuda [Japon] ; Shumpei Watanabe [Japon] ; Joseph S. Masangkay [Philippines] ; Tetsuya Mizutani [Japon] ; Phillip Alviola [Philippines] ; Naoya Ueda [Japon] ; Koichiro Iha [Japon] ; Satoshi Taniguchi [Japon] ; Hikaru Fujii [Japon] ; Kentaro Kato [Japon] ; Taisuke Horimoto [Japon] ; Shigeru Kyuwa [Japon] ; Yasuhiro Yoshikawa [Japon] ; Hiroomi Akashi [Japon]Source :
- Archives of Virology [ 0304-8608 ] ; 2012-12-01.
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- topic : Zoonose.
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Abstract
Abstract: Bat coronavirus (BtCoV) is assumed to be a progenitor of severe acute respiratory syndrome (SARS)-related coronaviruses. To explore the distribution of BtCoVs in the Philippines, we collected 179 bats and detected viral RNA from intestinal or fecal samples by RT-PCR. The overall prevalence of BtCoVs among bats was 29.6 %. Phylogenetic analysis of the partial RNA-dependent RNA polymerase gene suggested that one of the detected BtCoVs was a novel alphacoronavirus, while the others belonged to the genus Betacoronavirus. Western blotting revealed that 66.5 % of bat sera had antibodies to BtCoV. These surveys suggested the endemic presence of BtCoVs in the Philippines.
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DOI: 10.1007/s00705-012-1410-z
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Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Iha, Koichiro" sort="Iha, Koichiro" uniqKey="Iha K" first="Koichiro" last="Iha">Koichiro Iha</name><affiliation wicri:level="1"><mods:affiliation>Department of Virology 1, National Institute of Infectious Diseases, Gakuen 4-7-1, 208-0011, Musashimurayama, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Virology 1, National Institute of Infectious Diseases, Gakuen 4-7-1, 208-0011, Musashimurayama, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Taniguchi, Satoshi" sort="Taniguchi, Satoshi" uniqKey="Taniguchi S" first="Satoshi" last="Taniguchi">Satoshi Taniguchi</name><affiliation wicri:level="1"><mods:affiliation>Department of Virology 1, National Institute of Infectious Diseases, Gakuen 4-7-1, 208-0011, Musashimurayama, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Virology 1, National Institute of Infectious Diseases, Gakuen 4-7-1, 208-0011, Musashimurayama, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Fujii, Hikaru" sort="Fujii, Hikaru" uniqKey="Fujii H" first="Hikaru" last="Fujii">Hikaru Fujii</name><affiliation wicri:level="1"><mods:affiliation>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Kato, Kentaro" sort="Kato, Kentaro" uniqKey="Kato K" first="Kentaro" last="Kato">Kentaro Kato</name><affiliation wicri:level="1"><mods:affiliation>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Horimoto, Taisuke" sort="Horimoto, Taisuke" uniqKey="Horimoto T" first="Taisuke" last="Horimoto">Taisuke Horimoto</name><affiliation wicri:level="1"><mods:affiliation>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Kyuwa, Shigeru" sort="Kyuwa, Shigeru" uniqKey="Kyuwa S" first="Shigeru" last="Kyuwa">Shigeru Kyuwa</name><affiliation wicri:level="1"><mods:affiliation>Department of Biomedical Science, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Biomedical Science, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Yoshikawa, Yasuhiro" sort="Yoshikawa, Yasuhiro" uniqKey="Yoshikawa Y" first="Yasuhiro" last="Yoshikawa">Yasuhiro Yoshikawa</name><affiliation wicri:level="1"><mods:affiliation>Laboratory of Zoonosis, School of Veterinary Medicine, Kitasato University, Higashi 23-bancho, 034-8628, Towada, Aomori, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Laboratory of Zoonosis, School of Veterinary Medicine, 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xml:lang="fr">Japon</country><wicri:regionArea>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Watanabe, Shumpei" sort="Watanabe, Shumpei" uniqKey="Watanabe S" first="Shumpei" last="Watanabe">Shumpei Watanabe</name><affiliation wicri:level="1"><mods:affiliation>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Masangkay, Joseph S" sort="Masangkay, Joseph S" uniqKey="Masangkay J" first="Joseph S." last="Masangkay">Joseph S. Masangkay</name><affiliation wicri:level="1"><mods:affiliation>College of Veterinary Medicine, University of the Philippines Los Baños, College, 4031, Laguna, Philippines</mods:affiliation><country xml:lang="fr">Philippines</country><wicri:regionArea>College of Veterinary Medicine, University of the Philippines Los Baños, College, 4031, Laguna</wicri:regionArea></affiliation></author><author><name sortKey="Mizutani, Tetsuya" sort="Mizutani, Tetsuya" uniqKey="Mizutani T" first="Tetsuya" last="Mizutani">Tetsuya Mizutani</name><affiliation wicri:level="1"><mods:affiliation>Department of Virology 1, National Institute of Infectious Diseases, Gakuen 4-7-1, 208-0011, Musashimurayama, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Virology 1, National Institute of Infectious Diseases, Gakuen 4-7-1, 208-0011, Musashimurayama, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Alviola, Phillip" sort="Alviola, Phillip" uniqKey="Alviola P" first="Phillip" last="Alviola">Phillip Alviola</name><affiliation wicri:level="1"><mods:affiliation>Museum of National History, University of the Philippines Los Baños, College, 4031, Laguna, Philippines</mods:affiliation><country xml:lang="fr">Philippines</country><wicri:regionArea>Museum of National History, University of the Philippines Los Baños, College, 4031, Laguna</wicri:regionArea></affiliation></author><author><name sortKey="Ueda, Naoya" sort="Ueda, Naoya" uniqKey="Ueda N" first="Naoya" last="Ueda">Naoya Ueda</name><affiliation wicri:level="1"><mods:affiliation>Department of Biomedical Science, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Biomedical Science, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Iha, Koichiro" sort="Iha, Koichiro" uniqKey="Iha K" first="Koichiro" last="Iha">Koichiro Iha</name><affiliation wicri:level="1"><mods:affiliation>Department of Virology 1, National Institute of Infectious Diseases, Gakuen 4-7-1, 208-0011, Musashimurayama, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Virology 1, National Institute of Infectious Diseases, Gakuen 4-7-1, 208-0011, Musashimurayama, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Taniguchi, Satoshi" sort="Taniguchi, Satoshi" uniqKey="Taniguchi S" first="Satoshi" last="Taniguchi">Satoshi Taniguchi</name><affiliation wicri:level="1"><mods:affiliation>Department of Virology 1, National Institute of Infectious Diseases, Gakuen 4-7-1, 208-0011, Musashimurayama, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Virology 1, National Institute of Infectious Diseases, Gakuen 4-7-1, 208-0011, Musashimurayama, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Fujii, Hikaru" sort="Fujii, Hikaru" uniqKey="Fujii H" first="Hikaru" last="Fujii">Hikaru Fujii</name><affiliation wicri:level="1"><mods:affiliation>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Kato, Kentaro" sort="Kato, Kentaro" uniqKey="Kato K" first="Kentaro" last="Kato">Kentaro Kato</name><affiliation wicri:level="1"><mods:affiliation>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Horimoto, Taisuke" sort="Horimoto, Taisuke" uniqKey="Horimoto T" first="Taisuke" last="Horimoto">Taisuke Horimoto</name><affiliation wicri:level="1"><mods:affiliation>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Kyuwa, Shigeru" sort="Kyuwa, Shigeru" uniqKey="Kyuwa S" first="Shigeru" last="Kyuwa">Shigeru Kyuwa</name><affiliation wicri:level="1"><mods:affiliation>Department of Biomedical Science, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Biomedical Science, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo</wicri:regionArea></affiliation></author><author><name sortKey="Yoshikawa, Yasuhiro" sort="Yoshikawa, Yasuhiro" uniqKey="Yoshikawa Y" first="Yasuhiro" last="Yoshikawa">Yasuhiro Yoshikawa</name><affiliation wicri:level="1"><mods:affiliation>Laboratory of Zoonosis, School of Veterinary Medicine, Kitasato University, Higashi 23-bancho, 034-8628, Towada, Aomori, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Laboratory of Zoonosis, School of Veterinary Medicine, Kitasato University, Higashi 23-bancho, 034-8628, Towada, Aomori</wicri:regionArea></affiliation></author><author><name sortKey="Akashi, Hiroomi" sort="Akashi, Hiroomi" uniqKey="Akashi H" first="Hiroomi" last="Akashi">Hiroomi Akashi</name><affiliation wicri:level="1"><mods:affiliation>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo, Japan</mods:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, 113-8657, Tokyo</wicri:regionArea></affiliation><affiliation wicri:level="1"><mods:affiliation>E-mail: akashih@mail.ecc.u-tokyo.ac.jp</mods:affiliation><country wicri:rule="url">Japon</country></affiliation></author></analytic><monogr></monogr><series><title level="j">Archives of Virology</title><title level="j" type="sub">Official Journal of the Virology Division of the International Union of Microbiological Societies</title><title level="j" type="abbrev">Arch Virol</title><idno type="ISSN">0304-8608</idno><idno type="eISSN">1432-8798</idno><imprint><publisher>Springer Vienna</publisher><pubPlace>Vienna</pubPlace><date type="published" when="2012-12-01">2012-12-01</date><biblScope unit="volume">157</biblScope><biblScope unit="issue">12</biblScope><biblScope unit="page" from="2349">2349</biblScope><biblScope unit="page" to="2355">2355</biblScope></imprint><idno type="ISSN">0304-8608</idno></series></biblStruct></sourceDesc><seriesStmt><idno type="ISSN">0304-8608</idno></seriesStmt></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Antibody</term><term>Bat coronavirus</term><term>Bats</term><term>Coronavirus</term><term>SARS</term><term>Severe acute respiratory syndrome</term><term>Viruses</term><term>Zoonosis</term></keywords><keywords scheme="Wicri" type="topic" xml:lang="fr"><term>Zoonose</term></keywords></textClass><langUsage><language ident="en">en</language></langUsage></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Abstract: Bat coronavirus (BtCoV) is assumed to be a progenitor of severe acute respiratory syndrome (SARS)-related coronaviruses. To explore the distribution of BtCoVs in the Philippines, we collected 179 bats and detected viral RNA from intestinal or fecal samples by RT-PCR. The overall prevalence of BtCoVs among bats was 29.6 %. Phylogenetic analysis of the partial RNA-dependent RNA polymerase gene suggested that one of the detected BtCoVs was a novel alphacoronavirus, while the others belonged to the genus Betacoronavirus. Western blotting revealed that 66.5 % of bat sera had antibodies to BtCoV. These surveys suggested the endemic presence of BtCoVs in the Philippines.</div></front></TEI></record>Pour manipuler ce document sous Unix (Dilib)
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