SrasV1, Hal, Checkpoint, bibRecord, 000071

Conservation and divergence of bHLH genes in the calcisponge Sycon ciliatum.

Identifieur interne : 000071 ( Hal/Checkpoint ); précédent : 000070; suivant : 000072

Conservation and divergence of bHLH genes in the calcisponge Sycon ciliatum.

Auteurs : Sofia A V. Fortunato [Norvège] ; Michel Vervoort [France] ; Marcin Adamski [Australie] ; Maja Adamska [France]

Source :

EvoDevo [ 2041-9139 ] ; 2016-10-14.

RBID : Hal:hal-01472886

English descriptors

mix :
- Developmental regulatory genes, Evolution, Sponges, Sycon ciliatum, Transcription factors, bHLH.

Abstract

Basic Helix-Loop-Helix (bHLH) genes encode a large family of eukaryotic transcription factors, categorized into six high-order groups: pan-eukaryotic group B involved in regulation of cell cycle, metabolism, and development; holozoan-specific groups C and F involved in development and maintenance of homeostasis; and metazoan-specific groups A, D and E including well-studied genes, such as Atonal, Twist and Hairy, with diverse developmental roles including control of morphogenesis and specification of neurons. Current scenarios of bHLH evolution in animals are mainly based on the bHLH gene set found in the genome of demosponge Amphimedon queenslandica. In this species, the majority of the 21 identified bHLH genes belong to group B, and the single group A gene is orthologous to several neurogenic bilaterian subfamilies, including atonal and neurogenin.

Url:

https://hal.archives-ouvertes.fr/hal-01472886

DOI: 10.1186/s13227-016-0060-8

Links toward previous steps (curation, corpus...)

to stream Hal, to step Corpus: 000035
to stream Hal, to step Curation: 000035

Links to Exploration step

Hal:hal-01472886

Le document en format XML

<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Conservation and divergence of bHLH genes in the calcisponge Sycon ciliatum.</title>
<author><name sortKey="Fortunato, Sofia A V" sort="Fortunato, Sofia A V" uniqKey="Fortunato S" first="Sofia A V" last="Fortunato">Sofia A V. Fortunato</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-27720" status="INCOMING">          <orgName>SARS International Centre for Marine Molecular Biology</orgName>
          <desc>            <address>              <addrLine>Bergen</addrLine>
              <country key="NO"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-308578" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-308578" type="direct"><org type="institution" xml:id="struct-308578" status="INCOMING">          <orgName>SARS International Centre for Marine Molecular Biology</orgName>
          <desc>            <address>              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Norvège</country>
</affiliation>
</author>
<author><name sortKey="Vervoort, Michel" sort="Vervoort, Michel" uniqKey="Vervoort M" first="Michel" last="Vervoort">Michel Vervoort</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-1131" status="OLD">          <idno type="IdRef">026536412</idno>
          <idno type="RNSR">199712638E</idno>
          <orgName>Institut Jacques Monod</orgName>
          <orgName type="acronym">IJM (UMR_7592)</orgName>
          <date type="end">2019-12-31</date>
          <desc>            <address>              <addrLine>Université Paris Diderot, Bât. Buffon, 15 rue Hélène Brion, 75205 Paris cédex 13</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">http://www.ijm.fr/</ref>
          </desc>
          <listRelation>            <relation name="UMR_7592" active="#struct-300301" type="direct"></relation>
            <relation name="UMR_7592" active="#struct-441569" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle name="UMR_7592" active="#struct-300301" type="direct"><org type="institution" xml:id="struct-300301" status="OLD">          <idno type="ISNI">0000000121514068</idno>
          <idno type="IdRef">027542084</idno>
          <orgName>Université Paris Diderot - Paris 7</orgName>
          <orgName type="acronym">UPD7</orgName>
          <date type="end">2019-12-31</date>
          <desc>            <address>              <addrLine>5 rue Thomas-Mann - 75205 Paris cedex 13</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">http://www.univ-paris-diderot.fr</ref>
          </desc>
        </org>
</tutelle>
<tutelle name="UMR_7592" active="#struct-441569" type="direct"><org type="institution" xml:id="struct-441569" status="VALID">          <idno type="IdRef">02636817X</idno>
          <idno type="ISNI">0000000122597504</idno>
          <orgName>Centre National de la Recherche Scientifique</orgName>
          <orgName type="acronym">CNRS</orgName>
          <date type="start">1939-10-19</date>
          <desc>            <address>              <country key="FR"></country>
            </address>
            <ref type="url">http://www.cnrs.fr/</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>France</country>
</affiliation>
</author>
<author><name sortKey="Adamski, Marcin" sort="Adamski, Marcin" uniqKey="Adamski M" first="Marcin" last="Adamski">Marcin Adamski</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-215932" status="INCOMING">          <orgName>Research School of Biology</orgName>
          <desc>            <address>              <addrLine>Australian National University, Canberra ACT 0200</addrLine>
              <country key="AU"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-74662" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-74662" type="direct"><org type="institution" xml:id="struct-74662" status="VALID">          <orgName>Australian National University</orgName>
          <orgName type="acronym">ANU</orgName>
          <desc>            <address>              <addrLine>The Australian National University Canberra ACT 0200 Australia</addrLine>
              <country key="AU"></country>
            </address>
            <ref type="url">http://www.anu.edu.au/index.php</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Australie</country>
</affiliation>
</author>
<author><name sortKey="Adamska, Maja" sort="Adamska, Maja" uniqKey="Adamska M" first="Maja" last="Adamska">Maja Adamska</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-188653" status="VALID">          <idno type="RNSR">201220339K</idno>
          <orgName>Institut méditerranéen de biodiversité et d'écologie marine et continentale</orgName>
          <orgName type="acronym">IMBE</orgName>
          <date type="start">2012</date>
          <desc>            <address>              <addrLine>Aix Marseille Université, Campus Etoile, Faculté St-Jérôme case 421 Av. . escadrille Normandie-Niemen 13397 MARSEILLE CEDEX 20</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">http://www.imbe.fr/</ref>
          </desc>
          <listRelation>            <relation name="UMR7263" active="#struct-195507" type="direct"></relation>
            <relation name="UMR7263" active="#struct-198056" type="direct"></relation>
            <relation name="UMR7263" active="#struct-302715" type="direct"></relation>
            <relation name="UMR7263" active="#struct-441569" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle name="UMR7263" active="#struct-195507" type="direct"><org type="institution" xml:id="struct-195507" status="VALID">          <orgName>Avignon Université</orgName>
          <orgName type="acronym">AU</orgName>
          <desc>            <address>              <addrLine>74 rue Louis Pasteur - 84 029 Avignon cedex 1</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">http://www.univ-avignon.fr/</ref>
          </desc>
        </org>
</tutelle>
<tutelle name="UMR7263" active="#struct-198056" type="direct"><org type="institution" xml:id="struct-198056" status="VALID">          <idno type="IdRef">15863621X</idno>
          <idno type="ISNI">0000 0001 2176 4817</idno>
          <orgName>Aix Marseille Université</orgName>
          <orgName type="acronym">AMU</orgName>
          <date type="start">2012-01-01</date>
          <desc>            <address>              <addrLine>Aix-Marseille UniversitéJardins du Pharo58 Boulevard Charles Livon13284 Marseille cedex 7</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">http://www.univ-amu.fr/</ref>
          </desc>
        </org>
</tutelle>
<tutelle name="UMR7263" active="#struct-302715" type="direct"><org type="institution" xml:id="struct-302715" status="VALID">          <orgName>Institut de recherche pour le développement [IRD] : UMR237</orgName>
          <desc>            <address>              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
<tutelle name="UMR7263" active="#struct-441569" type="direct"><org type="institution" xml:id="struct-441569" status="VALID">          <idno type="IdRef">02636817X</idno>
          <idno type="ISNI">0000000122597504</idno>
          <orgName>Centre National de la Recherche Scientifique</orgName>
          <orgName type="acronym">CNRS</orgName>
          <date type="start">1939-10-19</date>
          <desc>            <address>              <country key="FR"></country>
            </address>
            <ref type="url">http://www.cnrs.fr/</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>France</country>
<placeName><settlement type="city">Marseille</settlement>
<region type="region" nuts="2">Provence-Alpes-Côte d'Azur</region>
</placeName>
<orgName type="university">Université d'Aix-Marseille</orgName>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">HAL</idno>
<idno type="RBID">Hal:hal-01472886</idno>
<idno type="halId">hal-01472886</idno>
<idno type="halUri">https://hal.archives-ouvertes.fr/hal-01472886</idno>
<idno type="url">https://hal.archives-ouvertes.fr/hal-01472886</idno>
<idno type="doi">10.1186/s13227-016-0060-8</idno>
<date when="2016-10-14">2016-10-14</date>
<idno type="wicri:Area/Hal/Corpus">000035</idno>
<idno type="wicri:Area/Hal/Curation">000035</idno>
<idno type="wicri:Area/Hal/Checkpoint">000071</idno>
<idno type="wicri:explorRef" wicri:stream="Hal" wicri:step="Checkpoint">000071</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Conservation and divergence of bHLH genes in the calcisponge Sycon ciliatum.</title>
<author><name sortKey="Fortunato, Sofia A V" sort="Fortunato, Sofia A V" uniqKey="Fortunato S" first="Sofia A V" last="Fortunato">Sofia A V. Fortunato</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-27720" status="INCOMING">          <orgName>SARS International Centre for Marine Molecular Biology</orgName>
          <desc>            <address>              <addrLine>Bergen</addrLine>
              <country key="NO"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-308578" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-308578" type="direct"><org type="institution" xml:id="struct-308578" status="INCOMING">          <orgName>SARS International Centre for Marine Molecular Biology</orgName>
          <desc>            <address>              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Norvège</country>
</affiliation>
</author>
<author><name sortKey="Vervoort, Michel" sort="Vervoort, Michel" uniqKey="Vervoort M" first="Michel" last="Vervoort">Michel Vervoort</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-1131" status="OLD">          <idno type="IdRef">026536412</idno>
          <idno type="RNSR">199712638E</idno>
          <orgName>Institut Jacques Monod</orgName>
          <orgName type="acronym">IJM (UMR_7592)</orgName>
          <date type="end">2019-12-31</date>
          <desc>            <address>              <addrLine>Université Paris Diderot, Bât. Buffon, 15 rue Hélène Brion, 75205 Paris cédex 13</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">http://www.ijm.fr/</ref>
          </desc>
          <listRelation>            <relation name="UMR_7592" active="#struct-300301" type="direct"></relation>
            <relation name="UMR_7592" active="#struct-441569" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle name="UMR_7592" active="#struct-300301" type="direct"><org type="institution" xml:id="struct-300301" status="OLD">          <idno type="ISNI">0000000121514068</idno>
          <idno type="IdRef">027542084</idno>
          <orgName>Université Paris Diderot - Paris 7</orgName>
          <orgName type="acronym">UPD7</orgName>
          <date type="end">2019-12-31</date>
          <desc>            <address>              <addrLine>5 rue Thomas-Mann - 75205 Paris cedex 13</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">http://www.univ-paris-diderot.fr</ref>
          </desc>
        </org>
</tutelle>
<tutelle name="UMR_7592" active="#struct-441569" type="direct"><org type="institution" xml:id="struct-441569" status="VALID">          <idno type="IdRef">02636817X</idno>
          <idno type="ISNI">0000000122597504</idno>
          <orgName>Centre National de la Recherche Scientifique</orgName>
          <orgName type="acronym">CNRS</orgName>
          <date type="start">1939-10-19</date>
          <desc>            <address>              <country key="FR"></country>
            </address>
            <ref type="url">http://www.cnrs.fr/</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>France</country>
</affiliation>
</author>
<author><name sortKey="Adamski, Marcin" sort="Adamski, Marcin" uniqKey="Adamski M" first="Marcin" last="Adamski">Marcin Adamski</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-215932" status="INCOMING">          <orgName>Research School of Biology</orgName>
          <desc>            <address>              <addrLine>Australian National University, Canberra ACT 0200</addrLine>
              <country key="AU"></country>
            </address>
          </desc>
          <listRelation>            <relation active="#struct-74662" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-74662" type="direct"><org type="institution" xml:id="struct-74662" status="VALID">          <orgName>Australian National University</orgName>
          <orgName type="acronym">ANU</orgName>
          <desc>            <address>              <addrLine>The Australian National University Canberra ACT 0200 Australia</addrLine>
              <country key="AU"></country>
            </address>
            <ref type="url">http://www.anu.edu.au/index.php</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Australie</country>
</affiliation>
</author>
<author><name sortKey="Adamska, Maja" sort="Adamska, Maja" uniqKey="Adamska M" first="Maja" last="Adamska">Maja Adamska</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-188653" status="VALID">          <idno type="RNSR">201220339K</idno>
          <orgName>Institut méditerranéen de biodiversité et d'écologie marine et continentale</orgName>
          <orgName type="acronym">IMBE</orgName>
          <date type="start">2012</date>
          <desc>            <address>              <addrLine>Aix Marseille Université, Campus Etoile, Faculté St-Jérôme case 421 Av. . escadrille Normandie-Niemen 13397 MARSEILLE CEDEX 20</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">http://www.imbe.fr/</ref>
          </desc>
          <listRelation>            <relation name="UMR7263" active="#struct-195507" type="direct"></relation>
            <relation name="UMR7263" active="#struct-198056" type="direct"></relation>
            <relation name="UMR7263" active="#struct-302715" type="direct"></relation>
            <relation name="UMR7263" active="#struct-441569" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle name="UMR7263" active="#struct-195507" type="direct"><org type="institution" xml:id="struct-195507" status="VALID">          <orgName>Avignon Université</orgName>
          <orgName type="acronym">AU</orgName>
          <desc>            <address>              <addrLine>74 rue Louis Pasteur - 84 029 Avignon cedex 1</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">http://www.univ-avignon.fr/</ref>
          </desc>
        </org>
</tutelle>
<tutelle name="UMR7263" active="#struct-198056" type="direct"><org type="institution" xml:id="struct-198056" status="VALID">          <idno type="IdRef">15863621X</idno>
          <idno type="ISNI">0000 0001 2176 4817</idno>
          <orgName>Aix Marseille Université</orgName>
          <orgName type="acronym">AMU</orgName>
          <date type="start">2012-01-01</date>
          <desc>            <address>              <addrLine>Aix-Marseille UniversitéJardins du Pharo58 Boulevard Charles Livon13284 Marseille cedex 7</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">http://www.univ-amu.fr/</ref>
          </desc>
        </org>
</tutelle>
<tutelle name="UMR7263" active="#struct-302715" type="direct"><org type="institution" xml:id="struct-302715" status="VALID">          <orgName>Institut de recherche pour le développement [IRD] : UMR237</orgName>
          <desc>            <address>              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
<tutelle name="UMR7263" active="#struct-441569" type="direct"><org type="institution" xml:id="struct-441569" status="VALID">          <idno type="IdRef">02636817X</idno>
          <idno type="ISNI">0000000122597504</idno>
          <orgName>Centre National de la Recherche Scientifique</orgName>
          <orgName type="acronym">CNRS</orgName>
          <date type="start">1939-10-19</date>
          <desc>            <address>              <country key="FR"></country>
            </address>
            <ref type="url">http://www.cnrs.fr/</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>France</country>
<placeName><settlement type="city">Marseille</settlement>
<region type="region" nuts="2">Provence-Alpes-Côte d'Azur</region>
</placeName>
<orgName type="university">Université d'Aix-Marseille</orgName>
</affiliation>
</author>
</analytic>
<idno type="DOI">10.1186/s13227-016-0060-8</idno>
<series><title level="j">EvoDevo</title>
<idno type="ISSN">2041-9139</idno>
<imprint><date type="datePub">2016-10-14</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="mix" xml:lang="en"><term>Developmental regulatory genes</term>
<term>Evolution</term>
<term>Sponges</term>
<term>Sycon ciliatum</term>
<term>Transcription factors</term>
<term>bHLH</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="0">              <p>Basic Helix-Loop-Helix (bHLH) genes encode a large family of eukaryotic transcription factors, categorized into six high-order groups: pan-eukaryotic group B involved in regulation of cell cycle, metabolism, and development; holozoan-specific groups C and F involved in development and maintenance of homeostasis; and metazoan-specific groups A, D and E including well-studied genes, such as Atonal, Twist and Hairy, with diverse developmental roles including control of morphogenesis and specification of neurons. Current scenarios of bHLH evolution in animals are mainly based on the bHLH gene set found in the genome of demosponge Amphimedon queenslandica. In this species, the majority of the 21 identified bHLH genes belong to group B, and the single group A gene is orthologous to several neurogenic bilaterian subfamilies, including atonal and neurogenin.</p>
            </div>
</front>
</TEI>
<hal api="V3">          <titleStmt>            <title xml:lang="en">Conservation and divergence of bHLH genes in the calcisponge Sycon ciliatum.</title>
            <author role="aut">              <persName>                <forename type="first">Sofia A V</forename>
                <surname>Fortunato</surname>
              </persName>
              <email type="md5">1debef53dd67a6fb1a02357e5779c271</email>
              <email type="domain">jcu.edu.au</email>
              <idno type="halauthorid">1494573</idno>
              <affiliation ref="#struct-27720"></affiliation>
              <affiliation ref="#struct-103966"></affiliation>
            </author>
            <author role="aut">              <persName>                <forename type="first">Michel</forename>
                <surname>Vervoort</surname>
              </persName>
              <email type="md5">43985a19c1fe6baac97b1bfe7c2d97f3</email>
              <email type="domain">ijm.fr</email>
              <idno type="halauthorid">1372313</idno>
              <affiliation ref="#struct-1131"></affiliation>
              <affiliation ref="#struct-303171"></affiliation>
            </author>
            <author role="aut">              <persName>                <forename type="first">Marcin</forename>
                <surname>Adamski</surname>
              </persName>
              <email type="md5">8c990e97d74fcbce0e38bcdaec158140</email>
              <email type="domain">anu.edu.au</email>
              <idno type="halauthorid">1494574</idno>
              <affiliation ref="#struct-215932"></affiliation>
              <affiliation ref="#struct-27720"></affiliation>
            </author>
            <author role="aut">              <persName>                <forename type="first">Maja</forename>
                <surname>Adamska</surname>
              </persName>
              <email type="md5">4cf166e5787960d1344e10035f538d4a</email>
              <email type="domain">anu.edu.au</email>
              <idno type="halauthorid">1494575</idno>
              <affiliation ref="#struct-188653"></affiliation>
              <affiliation ref="#struct-215932"></affiliation>
            </author>
            <editor role="depositor">              <persName>                <forename>Martine</forename>
                <surname>Bondidier</surname>
              </persName>
              <email type="md5">936cd32b8405a0c3eb8c6432ce90f978</email>
              <email type="domain">ijm.fr</email>
            </editor>
            <funder ref="#projanr-37990"></funder>
            <funder>Sars International Centre for Marine Molecular Biology</funder>
            <funder>Institut Universitaire de France</funder>
          </titleStmt>
          <editionStmt>            <edition n="v1" type="current">              <date type="whenSubmitted">2017-02-21 14:24:19</date>
              <date type="whenModified">2020-04-11 01:52:11</date>
              <date type="whenReleased">2017-02-21 14:24:19</date>
              <date type="whenProduced">2016-10-14</date>
              <ref type="externalLink" target="https://evodevojournal.biomedcentral.com/track/pdf/10.1186/s13227-016-0060-8"></ref>
            </edition>
            <respStmt>              <resp>contributor</resp>
              <name key="113036">                <persName>                  <forename>Martine</forename>
                  <surname>Bondidier</surname>
                </persName>
                <email type="md5">936cd32b8405a0c3eb8c6432ce90f978</email>
                <email type="domain">ijm.fr</email>
              </name>
            </respStmt>
          </editionStmt>
          <publicationStmt>            <distributor>CCSD</distributor>
            <idno type="halId">hal-01472886</idno>
            <idno type="halUri">https://hal.archives-ouvertes.fr/hal-01472886</idno>
            <idno type="halBibtex">fortunato:hal-01472886</idno>
            <idno type="halRefHtml">EvoDevo, BioMed Central, 2016, 7 (1), pp.23. ⟨10.1186/s13227-016-0060-8⟩</idno>
            <idno type="halRef">EvoDevo, BioMed Central, 2016, 7 (1), pp.23. ⟨10.1186/s13227-016-0060-8⟩</idno>
          </publicationStmt>
          <seriesStmt>            <idno type="stamp" n="OSU-INSTITUT-PYTHEAS">OSU INSTITUT PYTHEAS</idno>
            <idno type="stamp" n="IMBE" corresp="OSU-INSTITUT-PYTHEAS">Institut méditerranéen de biodiversité et d'écologie marine et continentale</idno>
            <idno type="stamp" n="CNRS">CNRS - Centre national de la recherche scientifique</idno>
            <idno type="stamp" n="IJM">Institut Jacques Monod</idno>
            <idno type="stamp" n="UNIV-AMU">Aix Marseille Université</idno>
            <idno type="stamp" n="GIP-BE">GIP Bretagne Environnement</idno>
            <idno type="stamp" n="TEST-AMU">Espace de test AMU</idno>
            <idno type="stamp" n="UNIV-AVIGNON">Université d'Avignon</idno>
            <idno type="stamp" n="UNIV-PARIS7" corresp="UNIV-PARIS">Université Denis Diderot - Paris VII</idno>
            <idno type="stamp" n="USPC">Université Sorbonne Paris Cité</idno>
            <idno type="stamp" n="UNIV-PARIS">Université de Paris</idno>
            <idno type="stamp" n="UP-SCIENCES">Université de Paris - Faculté des Sciences</idno>
          </seriesStmt>
          <notesStmt>            <note type="audience" n="2">International</note>
            <note type="popular" n="0">No</note>
            <note type="peer" n="1">Yes</note>
          </notesStmt>
          <sourceDesc>            <biblStruct>              <analytic>                <title xml:lang="en">Conservation and divergence of bHLH genes in the calcisponge Sycon ciliatum.</title>
                <author role="aut">                  <persName>                    <forename type="first">Sofia A V</forename>
                    <surname>Fortunato</surname>
                  </persName>
                  <email type="md5">1debef53dd67a6fb1a02357e5779c271</email>
                  <email type="domain">jcu.edu.au</email>
                  <idno type="halauthorid">1494573</idno>
                  <affiliation ref="#struct-27720"></affiliation>
                  <affiliation ref="#struct-103966"></affiliation>
                </author>
                <author role="aut">                  <persName>                    <forename type="first">Michel</forename>
                    <surname>Vervoort</surname>
                  </persName>
                  <email type="md5">43985a19c1fe6baac97b1bfe7c2d97f3</email>
                  <email type="domain">ijm.fr</email>
                  <idno type="halauthorid">1372313</idno>
                  <affiliation ref="#struct-1131"></affiliation>
                  <affiliation ref="#struct-303171"></affiliation>
                </author>
                <author role="aut">                  <persName>                    <forename type="first">Marcin</forename>
                    <surname>Adamski</surname>
                  </persName>
                  <email type="md5">8c990e97d74fcbce0e38bcdaec158140</email>
                  <email type="domain">anu.edu.au</email>
                  <idno type="halauthorid">1494574</idno>
                  <affiliation ref="#struct-215932"></affiliation>
                  <affiliation ref="#struct-27720"></affiliation>
                </author>
                <author role="aut">                  <persName>                    <forename type="first">Maja</forename>
                    <surname>Adamska</surname>
                  </persName>
                  <email type="md5">4cf166e5787960d1344e10035f538d4a</email>
                  <email type="domain">anu.edu.au</email>
                  <idno type="halauthorid">1494575</idno>
                  <affiliation ref="#struct-188653"></affiliation>
                  <affiliation ref="#struct-215932"></affiliation>
                </author>
              </analytic>
              <monogr>                <idno type="localRef">Cellules souches, développement et évolution : Resp. Michel VERVOORT</idno>
                <idno type="halJournalId" status="VALID">69020</idno>
                <idno type="issn">2041-9139</idno>
                <title level="j">EvoDevo</title>
                <imprint>                  <publisher>BioMed Central</publisher>
                  <biblScope unit="volume">7</biblScope>
                  <biblScope unit="issue">1</biblScope>
                  <biblScope unit="pp">23</biblScope>
                  <date type="datePub">2016-10-14</date>
                </imprint>
              </monogr>
              <idno type="doi">10.1186/s13227-016-0060-8</idno>
              <idno type="pubmed">27757221</idno>
            </biblStruct>
          </sourceDesc>
          <profileDesc>            <langUsage>              <language ident="en">English</language>
            </langUsage>
            <textClass>              <keywords scheme="author">                <term xml:lang="en">Developmental regulatory genes</term>
                <term xml:lang="en">Evolution</term>
                <term xml:lang="en">Sponges</term>
                <term xml:lang="en">Sycon ciliatum</term>
                <term xml:lang="en">Transcription factors</term>
                <term xml:lang="en">bHLH</term>
              </keywords>
              <classCode scheme="halDomain" n="sdv.bdd">Life Sciences [q-bio]/Development Biology</classCode>
              <classCode scheme="halDomain" n="sdv.bid.evo">Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]</classCode>
              <classCode scheme="halTypology" n="ART">Journal articles</classCode>
            </textClass>
            <abstract xml:lang="0">              <p>Basic Helix-Loop-Helix (bHLH) genes encode a large family of eukaryotic transcription factors, categorized into six high-order groups: pan-eukaryotic group B involved in regulation of cell cycle, metabolism, and development; holozoan-specific groups C and F involved in development and maintenance of homeostasis; and metazoan-specific groups A, D and E including well-studied genes, such as Atonal, Twist and Hairy, with diverse developmental roles including control of morphogenesis and specification of neurons. Current scenarios of bHLH evolution in animals are mainly based on the bHLH gene set found in the genome of demosponge Amphimedon queenslandica. In this species, the majority of the 21 identified bHLH genes belong to group B, and the single group A gene is orthologous to several neurogenic bilaterian subfamilies, including atonal and neurogenin.</p>
            </abstract>
            <abstract xml:lang="1">              <p>Given recently discovered differences in developmental toolkit components between siliceous and calcareous sponges, we have carried out genome-wide analysis of bHLH genes in Sycon ciliatum, an emerging calcisponge model. We identified 30 bHLH genes in this species, representing 12 individual families, including four group A families not found in Amphimedon, and two larger family groupings. Notably, the families represented in Sycon are only partially overlapping with those represented in Amphimedon. Developmental expression analysis of a subset of the identified genes revealed patterns consistent with deeply conserved roles, such as specification of sensory cells by Atona-related and stem cells by Myc genes.</p>
            </abstract>
            <abstract xml:lang="2">              <p>Our results demonstrate independent gene loss events in demosponges and calcisponges, implying a complex bHLH toolkit in the last common metazoan ancestor.</p>
            </abstract>
          </profileDesc>
        </hal>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/Hal/Checkpoint

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000071 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/Hal/Checkpoint/biblio.hfd -nk 000071 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    SrasV1
   |flux=    Hal
   |étape=   Checkpoint
   |type=    RBID
   |clé=     Hal:hal-01472886
   |texte=   Conservation and divergence of bHLH genes in the calcisponge Sycon ciliatum.
}}

This area was generated with Dilib version V0.6.33.
Data generation: Tue Apr 28 14:49:16 2020. Site generation: Sat Mar 27 22:06:49 2021

	Serveur d'exploration SRAS
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration SRAS

Conservation and divergence of bHLH genes in the calcisponge Sycon ciliatum.

Conservation and divergence of bHLH genes in the calcisponge Sycon ciliatum.

Source :

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Links to Exploration step

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri