Molecular and serological characterization of hepatitis B virus in deferred Ghanaian blood donors with and without elevated alanine aminotransferase
Identifieur interne : 004096 ( Istex/Corpus ); précédent : 004095; suivant : 004097Molecular and serological characterization of hepatitis B virus in deferred Ghanaian blood donors with and without elevated alanine aminotransferase
Auteurs : D. Candotti ; O. Opare-Sem ; H. Rezvan ; F. Sarkodie ; J. AllainSource :
- Journal of Viral Hepatitis [ 1352-0504 ] ; 2006-11.
English descriptors
- KwdEn :
- Alanine, Alanine aminotransferase, Aminotransferase, Antigen seroconversion, Assay, Asymptomatic, Authors journal compilation, Basic core promoter, Blackwell publishing, Blood donors, Bootstrap values, Candidate blood donors, Candotti, Chronic carriage, Chronic hepatitis, Clin microbiol, Core promoter, Direct sequencing, Donor, Double mutation, Gene sequences, Genetic diversity, Genotype, Ghanaian, Ghanaian blood donors, Ghanaian sequences, Hbeag, Hbeag positivity, Hbeag prevalence, Hepatitis, Hepatocellular carcinoma, High frequency, High prevalence, Identical sequences, Line probe assay, Liver disease, Median, Mutant, Mutation, Natural history, Nucleotide, Precore, Present study, Promoter, Reference sequences, Replication, Risk factors, Sequencing, Seroconversion, Surface antigen, Viral, Viral hepatitis, Viral load, Viral replication, Virol, Virus genotype, West africa.
- Teeft :
- Alanine, Alanine aminotransferase, Aminotransferase, Antigen seroconversion, Assay, Asymptomatic, Authors journal compilation, Basic core promoter, Blackwell publishing, Blood donors, Bootstrap values, Candidate blood donors, Candotti, Chronic carriage, Chronic hepatitis, Clin microbiol, Core promoter, Direct sequencing, Donor, Double mutation, Gene sequences, Genetic diversity, Genotype, Ghanaian, Ghanaian blood donors, Ghanaian sequences, Hbeag, Hbeag positivity, Hbeag prevalence, Hepatitis, Hepatocellular carcinoma, High frequency, High prevalence, Identical sequences, Line probe assay, Liver disease, Median, Mutant, Mutation, Natural history, Nucleotide, Precore, Present study, Promoter, Reference sequences, Replication, Risk factors, Sequencing, Seroconversion, Surface antigen, Viral, Viral hepatitis, Viral load, Viral replication, Virol, Virus genotype, West africa.
Abstract
Summary. Candidate blood donors in Ghana are frequent carriers of hepatitis B virus (HBV). A comparative study of 117 donor samples including 46 with alanine aminotransferase (ALT) ≥ 60 IU/L and 71 with ≤40 IU/L level was undertaken. S and the basic core promoter‐precore regions (BCP/PC) sequencing was used to identify genotypes and variants relevant to HBV natural history, respectively. Age, viral load, HBe status were correlated with molecular data. HBV genotype E (87%) was dominant with little genotypes A (10%) and D (3%). Comparing individuals with or without liver disease, an association between liver disease and older age (P = 0.004) and higher viral load (P = 0.002) whether as a whole population or only genotype E was found. Compared with a commercial assay, BCP/PC sequencing had lower sensitivity to detect mixtures of wild‐type and variant viruses but detected BCP deletions. BCP 1762/1764 variants were positively correlated with older age (P < 0.0001) and elevated ALT levels (P = 0.01). PC 1896 stop codon was marginally correlated with viral load (P = 0.09). HBV genotype E infection natural history appears different from genotypes B and C prevalent in Asia. Donors with liver disease being older, with higher viral load and higher BCP variant proportion may be at higher risk of cirrhosis and hepatocellular carcinoma
Url:
DOI: 10.1111/j.1365-2893.2006.00741.x
Links to Exploration step
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<front><div type="abstract">Summary. Candidate blood donors in Ghana are frequent carriers of hepatitis B virus (HBV). A comparative study of 117 donor samples including 46 with alanine aminotransferase (ALT) ≥ 60 IU/L and 71 with ≤40 IU/L level was undertaken. S and the basic core promoter‐precore regions (BCP/PC) sequencing was used to identify genotypes and variants relevant to HBV natural history, respectively. Age, viral load, HBe status were correlated with molecular data. HBV genotype E (87%) was dominant with little genotypes A (10%) and D (3%). Comparing individuals with or without liver disease, an association between liver disease and older age (P = 0.004) and higher viral load (P = 0.002) whether as a whole population or only genotype E was found. Compared with a commercial assay, BCP/PC sequencing had lower sensitivity to detect mixtures of wild‐type and variant viruses but detected BCP deletions. BCP 1762/1764 variants were positively correlated with older age (P < 0.0001) and elevated ALT levels (P = 0.01). PC 1896 stop codon was marginally correlated with viral load (P = 0.09). HBV genotype E infection natural history appears different from genotypes B and C prevalent in Asia. Donors with liver disease being older, with higher viral load and higher BCP variant proportion may be at higher risk of cirrhosis and hepatocellular carcinoma</div>
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<profileDesc><abstract xml:lang="en" style="main"><p><hi rend="bold">Summary. </hi>
Candidate blood donors in Ghana are frequent carriers of hepatitis B virus (HBV). A comparative study of 117 donor samples including 46 with alanine aminotransferase (ALT) ≥ 60 IU/L and 71 with ≤40 IU/L level was undertaken. S and the basic core promoter‐precore regions (BCP/PC) sequencing was used to identify genotypes and variants relevant to HBV natural history, respectively. Age, viral load, HBe status were correlated with molecular data. HBV genotype E (87%) was dominant with little genotypes A (10%) and D (3%). Comparing individuals with or without liver disease, an association between liver disease and older age (<hi rend="italic">P</hi>
= 0.004) and higher viral load (<hi rend="italic">P</hi>
= 0.002) whether as a whole population or only genotype E was found. Compared with a commercial assay, BCP/PC sequencing had lower sensitivity to detect mixtures of wild‐type and variant viruses but detected BCP deletions. BCP 1762/1764 variants were positively correlated with older age (<hi rend="italic">P</hi>
< 0.0001) and elevated ALT levels (<hi rend="italic">P</hi>
= 0.01). PC 1896 stop codon was marginally correlated with viral load (<hi rend="italic">P</hi>
= 0.09). HBV genotype E infection natural history appears different from genotypes B and C prevalent in Asia. Donors with liver disease being older, with higher viral load and higher BCP variant proportion may be at higher risk of cirrhosis and hepatocellular carcinoma</p>
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<correspondenceTo>Dr Daniel Candotti, Cambridge Blood Centre, Long Road, Cambridge CB2 2PT, UK. E‐mail: <email>dc241@cam.ac.uk</email>
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<titleGroup><title type="main">Molecular and serological characterization of hepatitis B virus in deferred Ghanaian blood donors with and without elevated alanine aminotransferase</title>
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<abstractGroup><abstract type="main" xml:lang="en"><p><b>Summary. </b>
Candidate blood donors in Ghana are frequent carriers of hepatitis B virus (HBV). A comparative study of 117 donor samples including 46 with alanine aminotransferase (ALT) ≥ 60 IU/L and 71 with ≤40 IU/L level was undertaken. S and the basic core promoter‐precore regions (BCP/PC) sequencing was used to identify genotypes and variants relevant to HBV natural history, respectively. Age, viral load, HBe status were correlated with molecular data. HBV genotype E (87%) was dominant with little genotypes A (10%) and D (3%). Comparing individuals with or without liver disease, an association between liver disease and older age (<i>P</i>
= 0.004) and higher viral load (<i>P</i>
= 0.002) whether as a whole population or only genotype E was found. Compared with a commercial assay, BCP/PC sequencing had lower sensitivity to detect mixtures of wild‐type and variant viruses but detected BCP deletions. BCP 1762/1764 variants were positively correlated with older age (<i>P</i>
< 0.0001) and elevated ALT levels (<i>P</i>
= 0.01). PC 1896 stop codon was marginally correlated with viral load (<i>P</i>
= 0.09). HBV genotype E infection natural history appears different from genotypes B and C prevalent in Asia. Donors with liver disease being older, with higher viral load and higher BCP variant proportion may be at higher risk of cirrhosis and hepatocellular carcinoma</p>
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<abstract>Summary. Candidate blood donors in Ghana are frequent carriers of hepatitis B virus (HBV). A comparative study of 117 donor samples including 46 with alanine aminotransferase (ALT) ≥ 60 IU/L and 71 with ≤40 IU/L level was undertaken. S and the basic core promoter‐precore regions (BCP/PC) sequencing was used to identify genotypes and variants relevant to HBV natural history, respectively. Age, viral load, HBe status were correlated with molecular data. HBV genotype E (87%) was dominant with little genotypes A (10%) and D (3%). Comparing individuals with or without liver disease, an association between liver disease and older age (P = 0.004) and higher viral load (P = 0.002) whether as a whole population or only genotype E was found. Compared with a commercial assay, BCP/PC sequencing had lower sensitivity to detect mixtures of wild‐type and variant viruses but detected BCP deletions. BCP 1762/1764 variants were positively correlated with older age (P < 0.0001) and elevated ALT levels (P = 0.01). PC 1896 stop codon was marginally correlated with viral load (P = 0.09). HBV genotype E infection natural history appears different from genotypes B and C prevalent in Asia. Donors with liver disease being older, with higher viral load and higher BCP variant proportion may be at higher risk of cirrhosis and hepatocellular carcinoma</abstract>
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<topic>precore promoter</topic>
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