Genetic analysis of HIV type 2 from Ghana and Guinea-Bissau, West Africa
Identifieur interne : 001204 ( Main/Merge ); précédent : 001203; suivant : 001205Genetic analysis of HIV type 2 from Ghana and Guinea-Bissau, West Africa
Auteurs : Koichi Ishikawa [Japon, Ghana] ; Wouter Janssens [Belgique] ; Jacob S. Banor [Ghana] ; Teiichiro Shinno [Japon] ; Joao Piedade [Portugal] ; Tetsutaro Sata [Japon] ; William K. Ampofo [Ghana] ; James A. M. Brandful [Ghana] ; Yoshio Koyanagi [Japon] ; Naoki Yamamoto [Japon] ; Wanda F. Canas-Ferreira [Portugal] ; Yaw Adu-Sarkodie [Ghana] ; Takeshi Kurata [Japon]Source :
- AIDS research and human retroviruses [ 0889-2229 ] ; 2001.
Descripteurs français
- Pascal (Inist)
- Wicri :
- geographic : Ghana, Côte d'Ivoire.
- topic : Homme.
English descriptors
- KwdEn :
Abstract
The phylogenetic variability of part of the long terminal repeat (LTR) region of HIV-2 strains isolated in 1995 from five individuals residing in Bissau, the capital city of Guinea-Bissau, and collected from seven persons from Kumasi, Ghana in 1996-1997, was analyzed. All Guinean samples and all but one Ghanaian sample clustered with HIV-2 subtype A. One Ghanaian sample (14%) was classified as HIV-2 subtype B. This study adds to previous reports on HIV-2 subtype distribution in West Africa indicating local prevalence of HIV-2 subtype B in Ivory Coast and neighboring Ghana.
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Banor</name><affiliation wicri:level="3"><inist:fA14 i1="02"><s1>Noguchi Memorial Institute for Medical Research, Ghana University</s1><s2>Accra</s2><s3>GHA</s3><sZ>1 aut.</sZ><sZ>3 aut.</sZ><sZ>7 aut.</sZ><sZ>8 aut.</sZ></inist:fA14><country>Ghana</country><placeName><settlement type="city">Accra</settlement><region nuts="2">Région du Grand Accra</region></placeName></affiliation></author><author><name sortKey="Shinno, Teiichiro" sort="Shinno, Teiichiro" uniqKey="Shinno T" first="Teiichiro" last="Shinno">Teiichiro Shinno</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>National Institute of Infectious Diseases, AIDS Research Center</s1><s2>Tokyo 162-8640</s2><s3>JPN</s3><sZ>1 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ><sZ>13 aut.</sZ></inist:fA14><country>Japon</country><placeName><settlement type="city">Tokyo</settlement><region type="région">Région de Kantō</region></placeName></affiliation></author><author><name sortKey="Piedade, Joao" sort="Piedade, Joao" uniqKey="Piedade J" first="Joao" last="Piedade">Joao Piedade</name><affiliation wicri:level="1"><inist:fA14 i1="04"><s1>Unidade de Virologia, Instituto de Higiene e Medicina Tropical (UNL)</s1><s2>Lisbon 1349-008</s2><s3>PRT</s3><sZ>5 aut.</sZ><sZ>11 aut.</sZ></inist:fA14><country>Portugal</country><wicri:noRegion>Lisbon 1349-008</wicri:noRegion></affiliation></author><author><name sortKey="Sata, Tetsutaro" sort="Sata, Tetsutaro" uniqKey="Sata T" first="Tetsutaro" last="Sata">Tetsutaro Sata</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>National Institute of Infectious Diseases, AIDS Research Center</s1><s2>Tokyo 162-8640</s2><s3>JPN</s3><sZ>1 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ><sZ>13 aut.</sZ></inist:fA14><country>Japon</country><placeName><settlement type="city">Tokyo</settlement><region type="région">Région de Kantō</region></placeName></affiliation></author><author><name sortKey="Ampofo, William K" sort="Ampofo, William K" uniqKey="Ampofo W" first="William K." last="Ampofo">William K. Ampofo</name><affiliation wicri:level="3"><inist:fA14 i1="02"><s1>Noguchi Memorial Institute for Medical Research, Ghana University</s1><s2>Accra</s2><s3>GHA</s3><sZ>1 aut.</sZ><sZ>3 aut.</sZ><sZ>7 aut.</sZ><sZ>8 aut.</sZ></inist:fA14><country>Ghana</country><placeName><settlement type="city">Accra</settlement><region nuts="2">Région du Grand Accra</region></placeName></affiliation></author><author><name sortKey="Brandful, James A M" sort="Brandful, James A M" uniqKey="Brandful J" first="James A. M." last="Brandful">James A. M. Brandful</name><affiliation wicri:level="3"><inist:fA14 i1="02"><s1>Noguchi Memorial Institute for Medical Research, Ghana University</s1><s2>Accra</s2><s3>GHA</s3><sZ>1 aut.</sZ><sZ>3 aut.</sZ><sZ>7 aut.</sZ><sZ>8 aut.</sZ></inist:fA14><country>Ghana</country><placeName><settlement type="city">Accra</settlement><region nuts="2">Région du Grand Accra</region></placeName></affiliation></author><author><name sortKey="Koyanagi, Yoshio" sort="Koyanagi, Yoshio" uniqKey="Koyanagi Y" first="Yoshio" last="Koyanagi">Yoshio Koyanagi</name><affiliation wicri:level="1"><inist:fA14 i1="05"><s1>Tokyo Medical and Dental University</s1><s2>Tokyo 113-8519</s2><s3>JPN</s3><sZ>9 aut.</sZ><sZ>10 aut.</sZ></inist:fA14><country>Japon</country><placeName><settlement type="city">Tokyo</settlement><region type="région">Région de Kantō</region></placeName></affiliation></author><author><name sortKey="Yamamoto, Naoki" sort="Yamamoto, Naoki" uniqKey="Yamamoto N" first="Naoki" last="Yamamoto">Naoki Yamamoto</name><affiliation wicri:level="1"><inist:fA14 i1="05"><s1>Tokyo Medical and Dental University</s1><s2>Tokyo 113-8519</s2><s3>JPN</s3><sZ>9 aut.</sZ><sZ>10 aut.</sZ></inist:fA14><country>Japon</country><placeName><settlement type="city">Tokyo</settlement><region type="région">Région de Kantō</region></placeName></affiliation></author><author><name sortKey="Canas Ferreira, Wanda F" sort="Canas Ferreira, Wanda F" uniqKey="Canas Ferreira W" first="Wanda F." last="Canas-Ferreira">Wanda F. Canas-Ferreira</name><affiliation wicri:level="1"><inist:fA14 i1="04"><s1>Unidade de Virologia, Instituto de Higiene e Medicina Tropical (UNL)</s1><s2>Lisbon 1349-008</s2><s3>PRT</s3><sZ>5 aut.</sZ><sZ>11 aut.</sZ></inist:fA14><country>Portugal</country><wicri:noRegion>Lisbon 1349-008</wicri:noRegion></affiliation></author><author><name sortKey="Adu Sarkodie, Yaw" sort="Adu Sarkodie, Yaw" uniqKey="Adu Sarkodie Y" first="Yaw" last="Adu-Sarkodie">Yaw Adu-Sarkodie</name><affiliation wicri:level="1"><inist:fA14 i1="06"><s1>School of Medical Sciences</s1><s2>Kumasi</s2><s3>GHA</s3><sZ>12 aut.</sZ></inist:fA14><country>Ghana</country><wicri:noRegion>School of Medical Sciences</wicri:noRegion></affiliation></author><author><name sortKey="Kurata, Takeshi" sort="Kurata, Takeshi" uniqKey="Kurata T" first="Takeshi" last="Kurata">Takeshi Kurata</name><affiliation wicri:level="1"><inist:fA14 i1="01"><s1>National Institute of Infectious Diseases, AIDS Research Center</s1><s2>Tokyo 162-8640</s2><s3>JPN</s3><sZ>1 aut.</sZ><sZ>4 aut.</sZ><sZ>6 aut.</sZ><sZ>13 aut.</sZ></inist:fA14><country>Japon</country><placeName><settlement type="city">Tokyo</settlement><region type="région">Région de Kantō</region></placeName></affiliation></author></analytic><series><title level="j" type="main">AIDS research and human retroviruses</title><title level="j" type="abbreviated">AIDS res. hum. retroviruses</title><idno type="ISSN">0889-2229</idno><imprint><date when="2001">2001</date></imprint></series></biblStruct></sourceDesc><seriesStmt><title level="j" type="main">AIDS research and human retroviruses</title><title level="j" type="abbreviated">AIDS res. hum. retroviruses</title><idno type="ISSN">0889-2229</idno></seriesStmt></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Ghana</term><term>Guinea-Bissau</term><term>HIV-2 virus</term><term>Human</term><term>Isolate</term><term>Ivory Coast</term><term>LTR sequence</term><term>Phylogeny</term><term>Prevalence</term><term>West Africa</term></keywords><keywords scheme="Pascal" xml:lang="fr"><term>Virus HIV2</term><term>Homme</term><term>Ghana</term><term>Guinée Bissau</term><term>Afrique Ouest</term><term>Phylogenèse</term><term>Séquence LTR</term><term>Isolat</term><term>Prévalence</term><term>Côte d'Ivoire</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Ghana</term><term>Côte d'Ivoire</term></keywords><keywords scheme="Wicri" type="topic" xml:lang="fr"><term>Homme</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The phylogenetic variability of part of the long terminal repeat (LTR) region of HIV-2 strains isolated in 1995 from five individuals residing in Bissau, the capital city of Guinea-Bissau, and collected from seven persons from Kumasi, Ghana in 1996-1997, was analyzed. All Guinean samples and all but one Ghanaian sample clustered with HIV-2 subtype A. One Ghanaian sample (14%) was classified as HIV-2 subtype B. This study adds to previous reports on HIV-2 subtype distribution in West Africa indicating local prevalence of HIV-2 subtype B in Ivory Coast and neighboring Ghana.</div></front></TEI><affiliations><list><country><li>Belgique</li><li>Ghana</li><li>Japon</li><li>Portugal</li></country><region><li>Province d'Anvers</li><li>Région de Kantō</li><li>Région du Grand Accra</li></region><settlement><li>Accra</li><li>Anvers</li><li>Tokyo</li></settlement></list><tree><country name="Japon"><region name="Région de Kantō"><name sortKey="Ishikawa, Koichi" sort="Ishikawa, Koichi" uniqKey="Ishikawa K" first="Koichi" last="Ishikawa">Koichi Ishikawa</name></region><name sortKey="Koyanagi, Yoshio" sort="Koyanagi, Yoshio" uniqKey="Koyanagi Y" first="Yoshio" last="Koyanagi">Yoshio Koyanagi</name><name sortKey="Kurata, Takeshi" sort="Kurata, Takeshi" uniqKey="Kurata T" first="Takeshi" last="Kurata">Takeshi Kurata</name><name sortKey="Sata, Tetsutaro" sort="Sata, Tetsutaro" uniqKey="Sata T" first="Tetsutaro" last="Sata">Tetsutaro Sata</name><name sortKey="Shinno, Teiichiro" sort="Shinno, Teiichiro" uniqKey="Shinno T" first="Teiichiro" last="Shinno">Teiichiro Shinno</name><name sortKey="Yamamoto, Naoki" sort="Yamamoto, Naoki" uniqKey="Yamamoto N" first="Naoki" last="Yamamoto">Naoki Yamamoto</name></country><country name="Ghana"><region name="Région du Grand Accra"><name sortKey="Ishikawa, Koichi" sort="Ishikawa, Koichi" uniqKey="Ishikawa K" first="Koichi" last="Ishikawa">Koichi Ishikawa</name></region><name sortKey="Adu Sarkodie, Yaw" sort="Adu Sarkodie, Yaw" uniqKey="Adu Sarkodie Y" first="Yaw" last="Adu-Sarkodie">Yaw Adu-Sarkodie</name><name sortKey="Ampofo, William K" sort="Ampofo, William K" uniqKey="Ampofo W" first="William K." last="Ampofo">William K. Ampofo</name><name sortKey="Banor, Jacob S" sort="Banor, Jacob S" uniqKey="Banor J" first="Jacob S." last="Banor">Jacob S. Banor</name><name sortKey="Brandful, James A M" sort="Brandful, James A M" uniqKey="Brandful J" first="James A. M." last="Brandful">James A. M. Brandful</name></country><country name="Belgique"><region name="Province d'Anvers"><name sortKey="Janssens, Wouter" sort="Janssens, Wouter" uniqKey="Janssens W" first="Wouter" last="Janssens">Wouter Janssens</name></region></country><country name="Portugal"><noRegion><name sortKey="Piedade, Joao" sort="Piedade, Joao" uniqKey="Piedade J" first="Joao" last="Piedade">Joao Piedade</name></noRegion><name sortKey="Canas Ferreira, Wanda F" sort="Canas Ferreira, Wanda F" uniqKey="Canas Ferreira W" first="Wanda F." last="Canas-Ferreira">Wanda F. Canas-Ferreira</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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